MGE detailed information
MGE type: Conjugative plasmid MGE length: 91107 bp
Accession: NZ_CP103590 Location: 1..91107 Organism: Escherichia coli strain 4750 Replicon: plasmid pMB7603_1
Accession: NZ_CP103590 Location: 1..91107 Organism: Escherichia coli strain 4750 Replicon: plasmid pMB7603_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T00_RS25245 (1) | 1..981 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| M5T00_RS25250 (984) | 984..1406 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| M5T00_RS25255 (1410) | 1410..1721 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| M5T00_RS25260 (1797) | 1797..2480 | + | 684 | WP_000086127.1 | DNA methylase | - |
| M5T00_RS25265 (2481) | 2481..2702 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| M5T00_RS25270 (2632) | 2632..3150 | + | 519 | WP_223350510.1 | DUF1380 family protein | - |
| M5T00_RS25275 (3195) | 3195..3965 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| M5T00_RS25280 (4378) | 4378..4803 | + | 426 | WP_001198889.1 | antirestriction protein | - |
| M5T00_RS25285 (4850) | 4850..5272 | + | 423 | WP_259384583.1 | DUF1380 domain-containing protein | - |
| M5T00_RS25290 (5269) | 5269..5460 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| M5T00_RS25295 (5794) | 5794..5862 | - | 69 | Protein_10 | pilus protein | - |
| M5T00_RS25300 (6231) | 6231..6758 | + | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| M5T00_RS25305 (6816) | 6816..7049 | + | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| M5T00_RS25310 (7108) | 7108..9066 | + | 1959 | WP_015508349.1 | ParB/RepB/Spo0J family partition protein | - |
| M5T00_RS25315 (9119) | 9119..9553 | + | 435 | WP_001579792.1 | conjugation system SOS inhibitor PsiB | - |
| M5T00_RS25320 (9550) | 9550..10269 | + | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| M5T00_RS25325 (10266) | 10266..10862 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| M5T00_RS25330 (11324) | 11324..11824 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| M5T00_RS25335 (12553) | 12553..12987 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| M5T00_RS25340 (13081) | 13081..13347 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| M5T00_RS25345 (13524) | 13524..13913 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| M5T00_RS25350 (13910) | 13910..14812 | + | 903 | WP_000038347.1 | Recombination-promoting nuclease RpnA | VF |
| M5T00_RS25355 (14874) | 14874..15080 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| M5T00_RS25360 (15111) | 15111..15362 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| M5T00_RS25365 (15941) | 15941..16789 | + | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| M5T00_RS25370 (16875) | 16875..17210 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M5T00_RS25375 (17444) | 17444..17776 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| M5T00_RS25380 (17787) | 17787..20486 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| M5T00_RS25385 (20523) | 20523..22814 | - | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| M5T00_RS25390 (22807) | 22807..23877 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| M5T00_RS25395 (23896) | 23896..25104 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (25284) | 25284..25341 | - | 58 | NuclAT_1 | - | - |
| - (25284) | 25284..25341 | - | 58 | NuclAT_1 | - | - |
| - (25284) | 25284..25341 | - | 58 | NuclAT_1 | - | - |
| - (25284) | 25284..25341 | - | 58 | NuclAT_1 | - | - |
| M5T00_RS25400 (25411) | 25411..26496 | - | 1086 | WP_000080543.1 | protein finQ | - |
| - (26705) | 26705..26765 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (26705) | 26705..26765 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (26705) | 26705..26765 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (26705) | 26705..26765 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| M5T00_RS25405 (26817) | 26817..26969 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| M5T00_RS25410 (27041) | 27041..27292 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| M5T00_RS25415 (27592) | 27592..27888 | + | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| M5T00_RS25420 (27953) | 27953..28129 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| M5T00_RS25425 (28521) | 28521..28730 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| M5T00_RS25430 (28802) | 28802..29464 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5T00_RS25435 (29535) | 29535..31703 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| M5T00_RS25440 (31800) | 31800..32384 | - | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| M5T00_RS25445 (32413) | 32413..33615 | - | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| M5T00_RS25450 (33582) | 33582..34196 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| M5T00_RS25455 (34196) | 34196..37240 | - | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| M5T00_RS25460 (37330) | 37330..38130 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M5T00_RS25465 (38114) | 38114..38302 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M5T00_RS25470 (38366) | 38366..38770 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| M5T00_RS25475 (38821) | 38821..39348 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M5T00_RS25480 (39348) | 39348..40052 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| M5T00_RS25485 (40052) | 40052..41341 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| M5T00_RS25490 (41344) | 41344..42327 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| M5T00_RS25495 (42338) | 42338..43030 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| M5T00_RS25500 (43027) | 43027..43374 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M5T00_RS25505 (43392) | 43392..47159 | - | 3768 | WP_012783940.1 | DUF5710 domain-containing protein | - |
| M5T00_RS25510 (47249) | 47249..47800 | - | 552 | WP_012783942.1 | Phospholipase D | VF |
| M5T00_RS25515 (47815) | 47815..48105 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| M5T00_RS25520 (48102) | 48102..49250 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| M5T00_RS25525 (49247) | 49247..50065 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| M5T00_RS25530 (50062) | 50062..50520 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| M5T00_RS25535 (50914) | 50914..51498 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| M5T00_RS25540 (51558) | 51558..52760 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| M5T00_RS25545 (52846) | 52846..53670 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| M5T00_RS25550 (53821) | 53821..54975 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| M5T00_RS25555 (54974) | 54974..55327 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| M5T00_RS25560 (55995) | 55995..56243 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| M5T00_RS25565 (56240) | 56240..57532 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| M5T00_RS25570 (57532) | 57532..58188 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| M5T00_RS25575 (58173) | 58173..58733 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| M5T00_RS25580 (58743) | 58743..59357 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| M5T00_RS25585 (59375) | 59375..60472 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| M5T00_RS25590 (60485) | 60485..62038 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| M5T00_RS25595 (62049) | 62049..62501 | - | 453 | WP_012783945.1 | hypothetical protein | VF |
| M5T00_RS25600 (62488) | 62488..63783 | - | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| M5T00_RS25605 (63776) | 63776..65458 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| M5T00_RS25610 (65472) | 65472..65909 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| M5T00_RS25615 (65909) | 65909..66976 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| M5T00_RS25620 (67600) | 67600..67896 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| M5T00_RS25625 (68063) | 68063..68317 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| M5T00_RS25630 (68479) | 68479..69030 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| M5T00_RS25635 (69203) | 69203..69886 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| M5T00_RS25640 (70140) | 70140..70673 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| M5T00_RS25645 (71115) | 71115..71402 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| M5T00_RS25650 (71440) | 71440..71598 | - | 159 | Protein_81 | ash family protein | - |
| M5T00_RS25655 (72556) | 72556..73587 | + | 1032 | WP_012783912.1 | plasmid replication initiator RepA | - |
| M5T00_RS25660 (74284) | 74284..74424 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| M5T00_RS25665 (74657) | 74657..75166 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| M5T00_RS25670 (75222) | 75222..75824 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| M5T00_RS25675 (76178) | 76178..77524 | + | 1347 | WP_001703911.1 | protein YagA | - |
| M5T00_RS25680 (77812) | 77812..80595 | - | 2784 | Protein_87 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M5T00_RS25685 (80621) | 80621..80953 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| M5T00_RS25690 (81000) | 81000..81875 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| M5T00_RS25695 (82131) | 82131..83393 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| M5T00_RS25700 (83575) | 83575..83793 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M5T00_RS25705 (83957) | 83957..84514 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| M5T00_RS25710 (84697) | 84697..85557 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| M5T00_RS25715 (85954) | 85954..86256 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| M5T00_RS25720 (86253) | 86253..86879 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| M5T00_RS25725 (87067) | 87067..88338 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| M5T00_RS25730 (88338) | 88338..88775 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M5T00_RS25735 (88772) | 88772..89020 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| M5T00_RS25740 (89438) | 89438..90340 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| M5T00_RS25745 (90344) | 90344..90430 | + | 87 | Protein_100 | hypothetical protein | - |
| M5T00_RS25750 (90435) | 90435..90770 | - | 336 | WP_001340323.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|