MGE detailed information
MGE type: Prophage MGE length: 72648 bp
Accession: NZ_CP103570 Location: 4312399..4385046 Organism: Escherichia coli strain 3045 Replicon: chromosome
Accession: NZ_CP103570 Location: 4312399..4385046 Organism: Escherichia coli strain 3045 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S79_RS20755 (4309127) | 4309127..4309591 | - | 465 | WP_000412428.1 | redox-sensitive transcriptional activator SoxR | - |
| M5S79_RS20760 (4309677) | 4309677..4310000 | + | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| M5S79_RS20765 (4310003) | 4310003..4311589 | - | 1587 | WP_000019548.1 | c-di-GMP phosphodiesterase PdeC | - |
| M5S79_RS20770 (4312019) | 4312019..4312300 | + | 282 | WP_001295689.1 | YjcB family protein | - |
| M5S79_RS20775 (4312399) | 4312399..4312935 | - | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| M5S79_RS20780 (4313189) | 4313189..4316011 | + | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| M5S79_RS20785 (4316046) | 4316046..4316402 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| M5S79_RS20790 (4316406) | 4316406..4316822 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| M5S79_RS20795 (4316933) | 4316933..4317646 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| M5S79_RS20800 (4318048) | 4318048..4318251 | + | 204 | WP_001321562.1 | protein YjbS | - |
| M5S79_RS20805 (4318753) | 4318753..4319946 | - | 1194 | WP_000486985.1 | aromatic amino acid transaminase | - |
| M5S79_RS20810 (4320199) | 4320199..4321278 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| M5S79_RS20815 (4321331) | 4321331..4322746 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| M5S79_RS20820 (4322829) | 4322829..4323812 | + | 984 | WP_000235508.1 | hypothetical protein | VF |
| M5S79_RS20825 (4323978) | 4323978..4324220 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| M5S79_RS20830 (4324354) | 4324354..4325391 | - | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| M5S79_RS20835 (4325480) | 4325480..4326577 | + | 1098 | WP_000332259.1 | hypothetical protein ; Integrase | Integrase |
| M5S79_RS20840 (4326638) | 4326638..4326886 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| M5S79_RS20845 (4327109) | 4327109..4327660 | + | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| M5S79_RS20850 (4327638) | 4327638..4329008 | + | 1371 | WP_039268535.1 | reverse transcriptase domain-containing protein | - |
| M5S79_RS20855 (4329121) | 4329121..4329705 | - | 585 | WP_251286810.1 | tail fiber assembly protein | - |
| M5S79_RS20860 (4329705) | 4329705..4332983 | - | 3279 | WP_251286811.1 | phage tail protein | - |
| M5S79_RS20865 (4333048) | 4333048..4333647 | - | 600 | WP_001230286.1 | hypothetical protein | VF |
| M5S79_RS20870 (4333717) | 4333717..4337214 | - | 3498 | WP_251286812.1 | host specificity protein J | - |
| M5S79_RS20875 (4337275) | 4337275..4337877 | - | 603 | WP_052920620.1 | tail assembly protein | - |
| M5S79_RS20880 (4337814) | 4337814..4338557 | - | 744 | WP_251286813.1 | C40 family peptidase | - |
| M5S79_RS20885 (4338562) | 4338562..4339260 | - | 699 | WP_001152403.1 | phage minor tail protein L | - |
| M5S79_RS20890 (4339270) | 4339270..4339599 | - | 330 | WP_000447248.1 | phage tail protein | - |
| M5S79_RS20895 (4339599) | 4339599..4342655 | - | 3057 | WP_220417009.1 | phage tail tape measure protein | - |
| M5S79_RS20900 (4342627) | 4342627..4342956 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| M5S79_RS20905 (4342965) | 4342965..4343351 | - | 387 | WP_001351445.1 | phage minor tail protein G | - |
| M5S79_RS20910 (4343412) | 4343412..4344155 | - | 744 | WP_119799394.1 | phage tail protein | - |
| M5S79_RS20915 (4344167) | 4344167..4344568 | - | 402 | WP_089545986.1 | phage minor tail U family protein | - |
| M5S79_RS20920 (4344565) | 4344565..4345143 | - | 579 | WP_000677108.1 | phage tail protein | - |
| M5S79_RS20925 (4345155) | 4345155..4345430 | - | 276 | WP_001283152.1 | DNA breaking-rejoining protein | - |
| M5S79_RS20930 (4345423) | 4345423..4345746 | - | 324 | WP_001097045.1 | DUF2190 family protein | - |
| M5S79_RS20935 (4345833) | 4345833..4347860 | - | 2028 | WP_088529315.1 | hypothetical protein | VF |
| M5S79_RS20940 (4347805) | 4347805..4349313 | - | 1509 | WP_000985938.1 | phage portal protein | - |
| M5S79_RS20945 (4349313) | 4349313..4349525 | - | 213 | WP_001072973.1 | hypothetical protein | - |
| M5S79_RS20950 (4349522) | 4349522..4351624 | - | 2103 | WP_000934132.1 | phage terminase large subunit family protein | - |
| M5S79_RS20955 (4351624) | 4351624..4352118 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| M5S79_RS20960 (4352487) | 4352487..4352636 | - | 150 | Protein_4099 | HNH endonuclease | - |
| M5S79_RS20965 (4353449) | 4353449..4353742 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| M5S79_RS20970 (4353774) | 4353774..4354235 | - | 462 | WP_251286814.1 | prophage endopeptidase RzpD | - |
| M5S79_RS20975 (4354232) | 4354232..4354708 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| M5S79_RS20980 (4354712) | 4354712..4355038 | - | 327 | WP_001120490.1 | phage holin, lambda family | - |
| M5S79_RS20985 (4355115) | 4355115..4356167 | - | 1053 | WP_251286815.1 | site-specific DNA-methyltransferase | - |
| M5S79_RS20990 (4356318) | 4356318..4356521 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| M5S79_RS20995 (4356823) | 4356823..4357758 | + | 936 | WP_047653678.1 | hypothetical protein | - |
| M5S79_RS21000 (4357791) | 4357791..4358360 | + | 570 | WP_198406512.1 | hypothetical protein | - |
| M5S79_RS21005 (4358380) | 4358380..4358727 | - | 348 | WP_047653676.1 | antiterminator Q family protein | - |
| M5S79_RS21010 (4358745) | 4358745..4359734 | - | 990 | WP_126697265.1 | DUF968 domain-containing protein | - |
| M5S79_RS21015 (4359742) | 4359742..4360551 | - | 810 | WP_126697264.1 | KilA-N domain-containing protein | - |
| M5S79_RS21020 (4360571) | 4360571..4360960 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M5S79_RS21025 (4360957) | 4360957..4361283 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| M5S79_RS21030 (4361280) | 4361280..4361933 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| M5S79_RS21035 (4361933) | 4361933..4362427 | - | 495 | WP_126697263.1 | PerC family transcriptional regulator | - |
| M5S79_RS21040 (4362424) | 4362424..4363365 | - | 942 | WP_126697262.1 | helix-turn-helix domain-containing protein | - |
| M5S79_RS21045 (4363355) | 4363355..4363534 | - | 180 | WP_001250272.1 | DUF4222 domain-containing protein | - |
| M5S79_RS21050 (4363710) | 4363710..4364267 | - | 558 | WP_000526668.1 | protein YmfL | - |
| M5S79_RS21055 (4364260) | 4364260..4364520 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| M5S79_RS21060 (4364618) | 4364618..4365310 | + | 693 | WP_063079610.1 | helix-turn-helix transcriptional regulator | - |
| M5S79_RS21065 (4366013) | 4366013..4366375 | + | 363 | WP_000135680.1 | protein YfdP | - |
| M5S79_RS21070 (4366441) | 4366441..4367265 | + | 825 | WP_000081311.1 | DUF2303 family protein | - |
| M5S79_RS21075 (4367454) | 4367454..4368236 | + | 783 | WP_047654657.1 | hypothetical protein | - |
| M5S79_RS21080 (4368273) | 4368273..4368554 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| M5S79_RS21085 (4368602) | 4368602..4368775 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| M5S79_RS21090 (4368815) | 4368815..4369201 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| M5S79_RS21095 (4369231) | 4369231..4369740 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| M5S79_RS21100 (4370057) | 4370057..4370161 | - | 105 | Protein_4127 | tRNA-dihydrouridine synthase | - |
| M5S79_RS21105 (4370524) | 4370524..4371509 | - | 986 | Protein_4128 | DUF2713 domain-containing protein | - |
| M5S79_RS21110 (4371827) | 4371827..4372342 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| M5S79_RS21115 (4372384) | 4372384..4372593 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| M5S79_RS21120 (4372709) | 4372709..4374034 | - | 1326 | WP_001326646.1 | MATE family efflux transporter DinF | - |
| M5S79_RS21125 (4374107) | 4374107..4374715 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| M5S79_RS21130 (4374825) | 4374825..4375193 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| M5S79_RS21135 (4375364) | 4375364..4377787 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| M5S79_RS21140 (4377942) | 4377942..4378814 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| M5S79_RS21145 (4378827) | 4378827..4379324 | - | 498 | WP_001297295.1 | chorismate lyase | - |
| M5S79_RS21150 (4379547) | 4379547..4381127 | - | 1581 | Protein_4137 | hypothetical protein | VF |
| M5S79_RS21155 (4381356) | 4381356..4382276 | - | 921 | WP_001326641.1 | maltose operon protein MalM | - |
| M5S79_RS21160 (4382519) | 4382519..4383859 | - | 1341 | WP_000973663.1 | maltoporin LamB | - |
| M5S79_RS21165 (4383931) | 4383931..4385046 | - | 1116 | WP_000179165.1 | hypothetical protein | VF |
| M5S79_RS21170 (4385411) | 4385411..4386601 | + | 1191 | WP_000695387.1 | maltose/maltodextrin ABC transporter substrate-binding protein MalE | - |
| M5S79_RS21175 (4386755) | 4386755..4388299 | + | 1545 | WP_001297290.1 | maltose ABC transporter permease MalF | - |
| M5S79_RS21180 (4388314) | 4388314..4389204 | + | 891 | WP_001252058.1 | maltose ABC transporter permease MalG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|