MGE detailed information
MGE type: Genomic_island MGE length: 15614 bp
Accession: NZ_CP103570 Location: 2342962..2358575 Organism: Escherichia coli strain 3045 Replicon: chromosome
Accession: NZ_CP103570 Location: 2342962..2358575 Organism: Escherichia coli strain 3045 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S79_RS11335 (2342962) | 2342962..2343228 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| M5S79_RS11340 (2343228) | 2343228..2344550 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| M5S79_RS11345 (2344862) | 2344862..2345070 | + | 209 | Protein_2219 | AraC family transcriptional regulator | - |
| M5S79_RS11350 (2345325) | 2345325..2346551 | + | 1227 | Protein_2220 | hypothetical protein | VF |
| M5S79_RS11355 (2346565) | 2346565..2347092 | + | 528 | WP_167776963.1 | hypothetical protein | VF |
| M5S79_RS11360 (2347134) | 2347134..2348362 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| M5S79_RS11365 (2348444) | 2348444..2348947 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| M5S79_RS11370 (2349006) | 2349006..2349920 | + | 915 | WP_000520662.1 | hypothetical protein | VF |
| M5S79_RS11375 (2350254) | 2350254..2352533 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| M5S79_RS11380 (2352781) | 2352781..2352978 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| M5S79_RS11385 (2353053) | 2353053..2353814 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| M5S79_RS11390 (2354216) | 2354216..2355898 | + | 1683 | WP_001295684.1 | sulfatase | - |
| M5S79_RS11395 (2355950) | 2355950..2357107 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| M5S79_RS11400 (2357073) | 2357073..2357195 | - | 123 | WP_120795387.1 | protein YneP | - |
| M5S79_RS11405 (2357398) | 2357398..2357862 | + | 465 | Protein_2231 | ABC transporter ATP-binding protein/permease | - |
| M5S79_RS11415 (2358603) | 2358603..2359859 | + | 1257 | Protein_2233 | ABC transporter ATP-binding protein/permease | - |
| M5S79_RS11420 (2359897) | 2359897..2362269 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |