MGE detailed information
MGE type: Prophage MGE length: 103525 bp
Accession: NZ_CP103559 Location: 3010458..3113982 Organism: Escherichia coli strain 3059 Replicon: chromosome
Accession: NZ_CP103559 Location: 3010458..3113982 Organism: Escherichia coli strain 3059 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T18_RS14780 () | 3006314..3007114 | + | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
| M5T18_RS14785 () | 3007127..3007978 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| M5T18_RS14790 () | 3008033..3008491 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| M5T18_RS14795 () | 3008920..3009486 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| M5T18_RS14800 () | 3009483..3010292 | - | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| M5T18_RS14805 () | 3010458..3010667 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| M5T18_RS14810 () | 3010680..3010823 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| M5T18_RS14815 () | 3011493..3011780 | - | 288 | WP_001006855.1 | YebO family protein | - |
| M5T18_RS14820 () | 3011855..3011998 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| M5T18_RS14825 () | 3012157..3012396 | + | 240 | WP_001211011.1 | YobH family protein | - |
| M5T18_RS14830 () | 3012540..3013331 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| M5T18_RS14835 () | 3013508..3014881 | + | 1374 | WP_001551227.1 | MFS transporter | - |
| M5T18_RS14840 () | 3014927..3015808 | - | 882 | WP_000984517.1 | protease HtpX | - |
| M5T18_RS14845 () | 3016000..3018048 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| M5T18_RS14850 () | 3018068..3018766 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| M5T18_RS14855 () | 3018863..3019360 | - | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| M5T18_RS14860 () | 3019490..3020773 | + | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| M5T18_RS14865 () | 3020742..3023375 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| M5T18_RS14870 () | 3023455..3024894 | + | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| M5T18_RS14875 () | 3025012..3025248 | + | 237 | WP_001295499.1 | YebV family protein | - |
| M5T18_RS14880 () | 3025353..3025544 | + | 192 | WP_001296140.1 | YebW family protein | - |
| M5T18_RS14885 () | 3025545..3026201 | - | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| - | 3026298..3026569 | + | 272 | - | - | Antitoxin Detail |
| - | 3026336..3026439 | - | 104 | - | - | Toxin Detail |
| M5T18_RS14890 () | 3026597..3026938 | - | 342 | WP_000976472.1 | YebY family protein | - |
| M5T18_RS14895 () | 3026951..3027823 | - | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| M5T18_RS14900 () | 3027827..3028201 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| M5T18_RS14905 () | 3028340..3028570 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| M5T18_RS14910 () | 3028672..3029328 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| M5T18_RS14915 () | 3029352..3030014 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| M5T18_RS14920 () | 3030011..3032071 | - | 2061 | WP_001551233.1 | oligopeptidase B | - |
| M5T18_RS14925 () | 3032228..3032653 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| M5T18_RS14930 () | 3032710..3033879 | + | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| M5T18_RS14935 () | 3034043..3034702 | - | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| M5T18_RS14940 () | 3035029..3035385 | - | 357 | WP_001295500.1 | protein YebF | - |
| M5T18_RS14945 () | 3035452..3035742 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| M5T18_RS14950 () | 3035876..3037054 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| M5T18_RS14955 () | 3037110..3037751 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| M5T18_RS14960 () | 3037788..3039599 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| M5T18_RS14965 () | 3039834..3041309 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| M5T18_RS14970 () | 3041647..3042516 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| M5T18_RS14975 () | 3042644..3044086 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| M5T18_RS14980 () | 3044217..3045188 | - | 972 | WP_000448381.1 | hypothetical protein | VF |
| M5T18_RS14985 () | 3045308..3046630 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| M5T18_RS14990 () | 3046646..3047578 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| M5T18_RS14995 () | 3047657..3048412 | + | 756 | WP_000202996.1 | hypothetical protein | VF |
| M5T18_RS15000 () | 3048409..3049194 | + | 786 | WP_000571465.1 | hypothetical protein | VF |
| M5T18_RS15005 () | 3049341..3050351 | - | 1011 | WP_023063666.1 | Holliday junction branch migration DNA helicase RuvB | - |
| M5T18_RS15010 () | 3050360..3050971 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| M5T18_RS15015 () | 3051110..3051175 | - | 66 | WP_001386853.1 | stress response small protein YobI | - |
| M5T18_RS15020 () | 3051246..3051848 | + | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| M5T18_RS15025 () | 3051850..3052371 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| M5T18_RS15030 () | 3052406..3053146 | - | 741 | WP_000907234.1 | hypothetical protein | VF |
| M5T18_RS15035 () | 3053175..3053627 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| M5T18_RS15040 () | 3053745..3055517 | - | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| M5T18_RS15045 () | 3055827..3056393 | + | 567 | WP_000891620.1 | hydrolase | - |
| M5T18_RS15050 () | 3056390..3056485 | + | 96 | Protein_2946 | hypothetical protein | - |
| M5T18_RS15055 () | 3056748..3056996 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| M5T18_RS15060 () | 3056993..3057139 | - | 147 | WP_001300215.1 | hypothetical protein | - |
| M5T18_RS15065 () | 3057112..3057231 | - | 120 | Protein_2949 | tail fiber assembly protein | - |
| M5T18_RS15070 () | 3057251..3057544 | - | 294 | WP_000355601.1 | hypothetical protein | - |
| M5T18_RS15075 () | 3057555..3058259 | - | 705 | WP_000235978.1 | tail fiber domain-containing protein | - |
| M5T18_RS15080 () | 3058269..3058550 | - | 282 | WP_000654140.1 | hypothetical protein | - |
| M5T18_RS15085 () | 3058550..3060925 | - | 2376 | WP_259390495.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5T18_RS15090 () | 3060990..3061589 | - | 600 | WP_001551182.1 | hypothetical protein | VF |
| M5T18_RS15095 () | 3061657..3065130 | - | 3474 | WP_259390496.1 | host specificity protein J | - |
| M5T18_RS15100 () | 3065474..3066055 | - | 582 | WP_001090043.1 | tail assembly protein | - |
| M5T18_RS15105 () | 3066052..3066795 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| M5T18_RS15110 () | 3066806..3067504 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| M5T18_RS15115 () | 3067504..3067833 | - | 330 | WP_000847298.1 | phage tail protein | - |
| M5T18_RS15120 () | 3067830..3070403 | - | 2574 | WP_259390497.1 | phage tail tape measure protein | - |
| M5T18_RS15125 () | 3070384..3070797 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| M5T18_RS15130 () | 3070824..3071255 | - | 432 | WP_001299690.1 | phage minor tail protein G | - |
| M5T18_RS15135 () | 3071274..3072020 | - | 747 | WP_074573898.1 | phage tail protein | - |
| M5T18_RS15140 () | 3072028..3072423 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| M5T18_RS15145 () | 3072420..3072995 | - | 576 | WP_033865030.1 | phage tail protein | - |
| M5T18_RS15150 () | 3073011..3073364 | - | 354 | WP_001204567.1 | head-tail joining protein | - |
| M5T18_RS15155 () | 3073357..3073725 | - | 369 | WP_001390684.1 | DNA-packaging protein FI | - |
| M5T18_RS15160 () | 3073778..3074806 | - | 1029 | WP_000522645.1 | major capsid protein | - |
| M5T18_RS15165 () | 3074864..3075211 | - | 348 | WP_000256796.1 | head decoration protein | - |
| M5T18_RS15170 () | 3075248..3076753 | - | 1506 | WP_001254006.1 | S49 family peptidase | - |
| M5T18_RS15175 () | 3076743..3078335 | - | 1593 | WP_219285893.1 | phage portal protein | - |
| M5T18_RS15180 () | 3078332..3078538 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| M5T18_RS15185 () | 3078522..3080450 | - | 1929 | WP_042020304.1 | phage terminase large subunit family protein | - |
| M5T18_RS15190 () | 3080422..3080970 | - | 549 | WP_000867569.1 | terminase small subunit | - |
| M5T18_RS15195 () | 3081475..3081660 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| M5T18_RS15200 () | 3081882..3081968 | - | 87 | WP_032140280.1 | hypothetical protein | - |
| M5T18_RS15205 () | 3081980..3082135 | - | 156 | WP_042004856.1 | hypothetical protein | - |
| M5T18_RS15210 () | 3082099..3082230 | - | 132 | WP_001280935.1 | hypothetical protein | - |
| M5T18_RS15215 () | 3082523..3083056 | - | 534 | WP_001092910.1 | lysozyme | - |
| M5T18_RS15220 () | 3083185..3083499 | + | 315 | WP_000551290.1 | hypothetical protein | - |
| M5T18_RS15225 () | 3083980..3084315 | - | 336 | Protein_2981 | YdfR family protein | - |
| M5T18_RS15230 () | 3084320..3084535 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| M5T18_RS15235 () | 3084612..3084857 | - | 246 | WP_001538590.1 | DUF826 domain-containing protein | - |
| M5T18_RS15240 () | 3084895..3085077 | - | 183 | WP_023143432.1 | DUF1378 family protein | - |
| M5T18_RS15245 () | 3085214..3085603 | - | 390 | Protein_2985 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| M5T18_RS15250 () | 3085655..3086868 | + | 1214 | WP_164966012.1 | IS3 family transposase IS629 | Transposase |
| M5T18_RS15255 () | 3086908..3088488 | - | 1581 | WP_259390498.1 | SASA family carbohydrate esterase | - |
| M5T18_RS15260 () | 3088749..3089084 | + | 336 | WP_001336019.1 | anti-adapter protein IraM | - |
| M5T18_RS15265 () | 3089155..3089271 | + | 117 | Protein_2989 | hypothetical protein | - |
| M5T18_RS15270 () | 3089365..3089496 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| M5T18_RS15285 () | 3090392..3091213 | - | 822 | WP_000762915.1 | antitermination protein | - |
| M5T18_RS15290 () | 3091210..3091584 | - | 375 | WP_000904112.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M5T18_RS15295 () | 3091597..3092643 | - | 1047 | WP_001554968.1 | DUF968 domain-containing protein | - |
| M5T18_RS15300 () | 3092645..3092923 | - | 279 | WP_001405664.1 | hypothetical protein | - |
| M5T18_RS15305 () | 3092990..3093241 | - | 252 | WP_000980988.1 | protein Rem | - |
| M5T18_RS15310 () | 3093458..3093613 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M5T18_RS15315 () | 3094172..3094687 | - | 516 | WP_001289993.1 | hypothetical protein | - |
| M5T18_RS15320 () | 3094684..3094860 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| M5T18_RS15325 () | 3094853..3095035 | - | 183 | WP_021572854.1 | hypothetical protein | - |
| M5T18_RS15330 () | 3095129..3095485 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| M5T18_RS15335 () | 3095463..3095924 | - | 462 | WP_001209471.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| M5T18_RS15340 () | 3095921..3096217 | - | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| M5T18_RS15345 () | 3096214..3096606 | - | 393 | WP_021524280.1 | DUF977 family protein | - |
| M5T18_RS15350 () | 3096622..3097392 | - | 771 | WP_001702777.1 | DUF1627 domain-containing protein | - |
| M5T18_RS15355 () | 3097426..3097887 | - | 462 | WP_000139457.1 | replication protein P | - |
| M5T18_RS15360 () | 3097880..3098920 | - | 1041 | WP_000020541.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| M5T18_RS15365 () | 3098892..3099443 | - | 552 | WP_000705383.1 | toxin YdaT family protein | - |
| M5T18_RS15370 () | 3099427..3099654 | - | 228 | WP_000476988.1 | Cro/CI family transcriptional regulator | - |
| M5T18_RS15375 () | 3099732..3100139 | + | 408 | WP_219285909.1 | helix-turn-helix domain-containing protein | - |
| M5T18_RS15380 () | 3100329..3100481 | + | 153 | WP_000379587.1 | DUF1391 family protein | - |
| M5T18_RS15385 () | 3100493..3100831 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| M5T18_RS15390 () | 3100820..3101014 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| M5T18_RS15395 () | 3101594..3102448 | + | 855 | WP_000935597.1 | Rha family phage regulatory protein | - |
| M5T18_RS15400 () | 3102459..3102647 | + | 189 | WP_001405662.1 | cell division inhibition protein DicB | - |
| M5T18_RS15405 () | 3102644..3102832 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| M5T18_RS15410 () | 3102928..3105399 | + | 2472 | WP_032284123.1 | exonuclease | - |
| M5T18_RS15415 () | 3105461..3105730 | + | 270 | WP_000003742.1 | excisionase | - |
| M5T18_RS15420 () | 3105699..3106817 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| M5T18_RS15425 () | 3106984..3107778 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| M5T18_RS15430 () | 3107775..3108821 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| M5T18_RS15435 () | 3108879..3109340 | + | 462 | WP_001550963.1 | DUF3592 domain-containing protein | - |
| M5T18_RS15440 () | 3109337..3110122 | + | 786 | WP_001550962.1 | TPM domain-containing protein | - |
| M5T18_RS15445 () | 3110260..3111081 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| M5T18_RS15450 () | 3111097..3112008 | - | 912 | WP_001550961.1 | N-acetylglucosamine kinase | - |
| M5T18_RS15455 () | 3112037..3113281 | - | 1245 | WP_019842380.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| M5T18_RS15460 () | 3113281..3113982 | - | 702 | WP_001033695.1 | hypothetical protein | VF |
| M5T18_RS15465 () | 3113975..3115174 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| M5T18_RS15470 () | 3115435..3116508 | + | 1074 | WP_001550959.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|