MGE detailed information
MGE type: Prophage MGE length: 84136 bp
Accession: NZ_CP103559 Location: 2391965..2476100 Organism: Escherichia coli strain 3059 Replicon: chromosome
Accession: NZ_CP103559 Location: 2391965..2476100 Organism: Escherichia coli strain 3059 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T18_RS11665 (2387660) | 2387660..2388424 | + | 765 | WP_001308626.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase | - |
| M5T18_RS11670 (2388451) | 2388451..2389008 | + | 558 | WP_001278727.1 | HTH-type transcriptional regulator PuuR | - |
| M5T18_RS11675 (2389158) | 2389158..2390645 | + | 1488 | WP_001551025.1 | aldehyde dehydrogenase PuuC | - |
| M5T18_RS11680 (2390647) | 2390647..2391927 | + | 1281 | WP_000134848.1 | gamma-glutamylputrescine oxidase | - |
| M5T18_RS11685 (2391965) | 2391965..2393230 | + | 1266 | WP_001551026.1 | hypothetical protein | VF |
| M5T18_RS11690 (2393350) | 2393350..2394327 | - | 978 | WP_000852835.1 | hypothetical protein | VF |
| M5T18_RS11695 (2394494) | 2394494..2395162 | + | 669 | WP_000511021.1 | phage shock protein PspA | - |
| M5T18_RS11700 (2395216) | 2395216..2395440 | + | 225 | WP_001274963.1 | envelope stress response membrane protein PspB | - |
| M5T18_RS11705 (2395440) | 2395440..2395799 | + | 360 | WP_000907387.1 | envelope stress response membrane protein PspC | - |
| M5T18_RS11710 (2395808) | 2395808..2396029 | + | 222 | WP_001295585.1 | phage shock protein PspD | - |
| M5T18_RS11715 (2396104) | 2396104..2396418 | + | 315 | WP_000473128.1 | thiosulfate sulfurtransferase PspE | - |
| M5T18_RS11720 (2396537) | 2396537..2397934 | + | 1398 | WP_000825768.1 | YcjX family protein | - |
| M5T18_RS11725 (2397931) | 2397931..2398992 | + | 1062 | WP_001563821.1 | YcjF family protein | - |
| M5T18_RS11730 (2399140) | 2399140..2400681 | + | 1542 | WP_001309477.1 | hypothetical protein | VF |
| M5T18_RS11735 (2400725) | 2400725..2401231 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| M5T18_RS11740 (2401350) | 2401350..2402315 | + | 966 | WP_001551028.1 | L-Ala-D/L-Glu epimerase | - |
| M5T18_RS11745 (2402290) | 2402290..2403018 | - | 729 | WP_001551029.1 | murein tripeptide amidase MpaA | - |
| M5T18_RS11750 (2403309) | 2403309..2403947 | - | 639 | WP_000800177.1 | SDR family oxidoreductase | - |
| M5T18_RS11755 (2404018) | 2404018..2404938 | - | 921 | WP_000981716.1 | alpha/beta hydrolase | - |
| M5T18_RS11760 (2405076) | 2405076..2405975 | + | 900 | WP_000817700.1 | hypothetical protein | VF |
| M5T18_RS11765 (2406312) | 2406312..2407925 | + | 1614 | WP_001551030.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| M5T18_RS11770 (2407976) | 2407976..2409007 | - | 1032 | WP_000559899.1 | low conductance mechanosensitive channel YnaI | - |
| M5T18_RS11775 (2409251) | 2409251..2409508 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| M5T18_RS11780 (2409558) | 2409558..2410508 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| M5T18_RS11785 (2410660) | 2410660..2411412 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| M5T18_RS11790 (2411607) | 2411607..2412122 | - | 516 | WP_000945045.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| M5T18_RS11795 (2412133) | 2412133..2413659 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| M5T18_RS11800 (2413696) | 2413696..2415141 | - | 1446 | WP_001156454.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| M5T18_RS11805 (2415141) | 2415141..2416451 | - | 1311 | WP_001551031.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| M5T18_RS11810 (2416627) | 2416627..2417535 | + | 909 | WP_000885449.1 | LysR family transcriptional regulator | - |
| M5T18_RS11815 (2417708) | 2417708..2418523 | - | 816 | WP_000156573.1 | hypothetical protein | VF |
| M5T18_RS11820 (2418620) | 2418620..2419648 | + | 1029 | WP_001551032.1 | hypothetical protein | VF |
| M5T18_RS11825 (2419645) | 2419645..2421159 | + | 1515 | WP_019842378.1 | DHA2 family efflux MFS transporter permease subunit | - |
| M5T18_RS11830 (2421354) | 2421354..2421917 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| M5T18_RS11835 (2421938) | 2421938..2423170 | - | 1233 | WP_001314661.1 | diguanylate cyclase DgcM | - |
| M5T18_RS11840 (2423364) | 2423364..2423411 | + | 48 | WP_211180494.1 | protein YnaN | - |
| M5T18_RS11845 (2423425) | 2423425..2424408 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| M5T18_RS11850 (2424886) | 2424886..2426259 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| M5T18_RS11855 (2426388) | 2426388..2427323 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| M5T18_RS11860 (2427375) | 2427375..2428610 | - | 1236 | WP_001551035.1 | hypothetical protein ; Integrase | Integrase |
| M5T18_RS11865 (2428612) | 2428612..2428827 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2430244) | 2430244..2430422 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2430244) | 2430244..2430422 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2430244) | 2430244..2430422 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2430244) | 2430244..2430422 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| M5T18_RS11875 (2430240) | 2430240..2430428 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| M5T18_RS11880 (2430421) | 2430421..2430615 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| M5T18_RS11885 (2430672) | 2430672..2431481 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| M5T18_RS11890 (2431474) | 2431474..2434125 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| M5T18_RS11895 (2434227) | 2434227..2434502 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| M5T18_RS11900 (2434577) | 2434577..2434747 | - | 171 | WP_001551041.1 | YdaE family protein | - |
| M5T18_RS11905 (2434747) | 2434747..2434968 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| M5T18_RS11910 (2435511) | 2435511..2435663 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| M5T18_RS11915 (2435674) | 2435674..2435808 | - | 135 | WP_000233813.1 | hypothetical protein | - |
| M5T18_RS11920 (2436117) | 2436117..2436593 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| M5T18_RS11925 (2436717) | 2436717..2437013 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| M5T18_RS11930 (2437036) | 2437036..2437458 | + | 423 | WP_001551045.1 | toxin YdaT family protein | - |
| M5T18_RS11935 (2437471) | 2437471..2438328 | + | 858 | WP_001551046.1 | YdaU family protein | - |
| M5T18_RS11940 (2438335) | 2438335..2439081 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| M5T18_RS11945 (2439104) | 2439104..2439865 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| M5T18_RS11950 (2439881) | 2439881..2440312 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| M5T18_RS11955 (2440506) | 2440506..2441660 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| M5T18_RS11960 (2441635) | 2441635..2443899 | + | 2265 | WP_259390544.1 | S8 family peptidase | - |
| M5T18_RS11965 (2444313) | 2444313..2444912 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| M5T18_RS11970 (2444912) | 2444912..2445202 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| M5T18_RS11975 (2445199) | 2445199..2445741 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| M5T18_RS11990 (2446865) | 2446865..2446990 | - | 126 | WP_001298832.1 | hypothetical protein | - |
| M5T18_RS11995 (2447023) | 2447023..2447238 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| M5T18_RS12000 (2447238) | 2447238..2447735 | + | 498 | WP_001551053.1 | lysozyme RrrD | - |
| M5T18_RS12005 (2447952) | 2447952..2448137 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| M5T18_RS12010 (2448334) | 2448334..2449791 | + | 1458 | WP_135132595.1 | Trk system potassium transporter TrkG | - |
| M5T18_RS12015 (2449929) | 2449929..2450186 | + | 258 | Protein_2342 | ParB/Srx family N-terminal domain-containing protein | - |
| M5T18_RS12020 (2450713) | 2450713..2451645 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| M5T18_RS12025 (2451623) | 2451623..2451832 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| M5T18_RS12030 (2451836) | 2451836..2452930 | + | 1095 | WP_001551055.1 | terminase small subunit | - |
| M5T18_RS12035 (2452911) | 2452911..2454212 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| M5T18_RS12040 (2454215) | 2454215..2455621 | + | 1407 | WP_001551056.1 | DUF4055 domain-containing protein | - |
| M5T18_RS12045 (2455605) | 2455605..2456717 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| M5T18_RS12050 (2456822) | 2456822..2457586 | + | 765 | WP_001551057.1 | hypothetical protein | - |
| M5T18_RS12055 (2457685) | 2457685..2458824 | + | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| M5T18_RS12060 (2458867) | 2458867..2459043 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| M5T18_RS12065 (2459047) | 2459047..2459442 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| M5T18_RS12070 (2459442) | 2459442..2459825 | + | 384 | WP_001551058.1 | hypothetical protein | - |
| M5T18_RS12075 (2459826) | 2459826..2460206 | + | 381 | WP_001551059.1 | hypothetical protein | - |
| M5T18_RS12080 (2460203) | 2460203..2460595 | + | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| M5T18_RS12085 (2460622) | 2460622..2461584 | + | 963 | WP_001551060.1 | phage tail tube protein | - |
| M5T18_RS12090 (2461735) | 2461735..2462094 | + | 360 | WP_122452218.1 | protein YdaY | - |
| M5T18_RS12095 (2462566) | 2462566..2465799 | + | 3234 | Protein_2358 | phage tail tape measure protein | - |
| M5T18_RS12100 (2465792) | 2465792..2466130 | + | 339 | WP_000024051.1 | phage tail protein | - |
| M5T18_RS12105 (2466130) | 2466130..2466828 | + | 699 | WP_001152425.1 | phage minor tail protein L | - |
| M5T18_RS12110 (2466834) | 2466834..2467577 | + | 744 | WP_032147653.1 | C40 family peptidase | - |
| M5T18_RS12115 (2467574) | 2467574..2468122 | + | 549 | WP_001551064.1 | tail assembly protein | - |
| M5T18_RS12120 (2468183) | 2468183..2471662 | + | 3480 | WP_001551065.1 | host specificity protein J | - |
| M5T18_RS12125 (2471730) | 2471730..2472329 | + | 600 | WP_001228337.1 | hypothetical protein | VF |
| M5T18_RS12130 (2472394) | 2472394..2474769 | + | 2376 | WP_001551066.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5T18_RS12135 (2474769) | 2474769..2475050 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| M5T18_RS12140 (2475060) | 2475060..2476100 | + | 1041 | WP_001551067.1 | tail fiber domain-containing protein | - |
| M5T18_RS12145 (2476143) | 2476143..2476436 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| M5T18_RS12150 (2476456) | 2476456..2476575 | + | 120 | Protein_2369 | tail fiber assembly protein | - |
| M5T18_RS12155 (2476788) | 2476788..2477645 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| M5T18_RS12160 (2477642) | 2477642..2478499 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| M5T18_RS12165 (2478496) | 2478496..2479323 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| M5T18_RS12170 (2479323) | 2479323..2480237 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|