MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31691 bp
Accession: NZ_CP103537 Location: 1..31691 Organism: Escherichia coli strain 4238 Replicon: plasmid pMB9108_4
Accession: NZ_CP103537 Location: 1..31691 Organism: Escherichia coli strain 4238 Replicon: plasmid pMB9108_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T38_RS24805 (M5T38_24805) | 1..546 | + | 546 | WP_015060502.1 | DNA distortion polypeptide 1 | - |
| M5T38_RS24810 (M5T38_24810) | 549..1715 | + | 1167 | WP_137689447.1 | hypothetical protein | Relaxase |
| M5T38_RS24815 (M5T38_24815) | 2068..2586 | + | 519 | WP_072276631.1 | transcription termination/antitermination NusG family protein | - |
| M5T38_RS24820 (M5T38_24820) | 2516..2728 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| M5T38_RS24825 (M5T38_24825) | 2761..3408 | + | 648 | WP_000953526.1 | hypothetical protein | VF |
| M5T38_RS24830 (M5T38_24830) | 3386..3682 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| M5T38_RS24835 (M5T38_24835) | 3701..3889 | + | 189 | Protein_6 | Type IV secretion system protein virB4 | VF |
| M5T38_RS24840 (M5T38_24840) | 4460..6454 | + | 1995 | WP_236922165.1 | Type IV secretion system protein virB4 | VF |
| M5T38_RS24845 (M5T38_24845) | 6465..7214 | + | 750 | WP_000744202.1 | type IV secretion system protein | - |
| M5T38_RS24850 (M5T38_24850) | 7229..7513 | + | 285 | WP_259419181.1 | EexN family lipoprotein | - |
| M5T38_RS24855 (M5T38_24855) | 7525..8586 | + | 1062 | WP_000796673.1 | hypothetical protein | VF |
| M5T38_RS24860 (M5T38_24860) | 8713..8841 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| M5T38_RS24865 (M5T38_24865) | 8831..9544 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| M5T38_RS24870 (M5T38_24870) | 9549..10478 | + | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| M5T38_RS24875 (M5T38_24875) | 10475..11680 | + | 1206 | WP_219390219.1 | hypothetical protein | VF |
| M5T38_RS24880 (M5T38_24880) | 11682..12713 | + | 1032 | WP_001058463.1 | Type IV secretion system protein VirB11 | VF |
| M5T38_RS24885 (M5T38_24885) | 12716..14551 | + | 1836 | WP_014106755.1 | type IV secretory system conjugative DNA transfer family protein | - |
| M5T38_RS24890 (M5T38_24890) | 14548..14961 | + | 414 | WP_031942378.1 | cag pathogenicity island Cag12 family protein | - |
| M5T38_RS24895 (M5T38_24895) | 14958..15260 | + | 303 | WP_000717624.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| M5T38_RS24900 (M5T38_24900) | 15375..16298 | - | 924 | WP_259419185.1 | SMEK domain-containing protein | - |
| M5T38_RS24905 (M5T38_24905) | 16434..18587 | + | 2154 | WP_040084152.1 | type IA DNA topoisomerase | - |
| M5T38_RS24910 (M5T38_24910) | 18584..18790 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| M5T38_RS24915 (M5T38_24915) | 18806..19240 | + | 435 | WP_001293129.1 | H-NS family nucleoid-associated regulatory protein | - |
| M5T38_RS24920 (M5T38_24920) | 19529..20226 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| M5T38_RS24925 (M5T38_24925) | 21524..21703 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| M5T38_RS24930 (M5T38_24930) | 21819..22463 | - | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| M5T38_RS24935 (M5T38_24935) | 22758..23378 | + | 621 | WP_000864788.1 | ParA family protein | - |
| M5T38_RS24940 (M5T38_24940) | 23430..23660 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| M5T38_RS24945 (M5T38_24945) | 24084..25148 | + | 1065 | WP_012291478.1 | ParA family protein | - |
| M5T38_RS24950 (M5T38_24950) | 25686..26039 | - | 354 | WP_001675596.1 | DNA distortion polypeptide 3 | - |
| M5T38_RS24955 (M5T38_24955) | 26176..26622 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| M5T38_RS24960 (M5T38_24960) | 26662..27498 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| M5T38_RS24965 (M5T38_24965) | 28732..28983 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| M5T38_RS24970 (M5T38_24970) | 28973..29254 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5T38_RS24975 (M5T38_24975) | 29400..29723 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| M5T38_RS24980 (M5T38_24980) | 29768..30013 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| M5T38_RS24985 (M5T38_24985) | 30003..30218 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| M5T38_RS24990 (M5T38_24990) | 30311..30640 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| M5T38_RS24995 (M5T38_24995) | 30683..30862 | + | 180 | WP_024133577.1 | hypothetical protein | - |
| M5T38_RS25000 (M5T38_25000) | 30932..31081 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| M5T38_RS25005 (M5T38_25005) | 31094..31366 | + | 273 | WP_000160399.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|