MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54200 bp
Accession: NZ_CP103531 Location: 1..54200 Organism: Escherichia coli strain 5270 Replicon: plasmid pMB9245_2
Accession: NZ_CP103531 Location: 1..54200 Organism: Escherichia coli strain 5270 Replicon: plasmid pMB9245_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T24_RS24895 (M5T24_24895) | 1..2754 | + | 2754 | WP_001354552.1 | Type IV secretion system protein virB4 | VF |
| M5T24_RS24900 (M5T24_24900) | 2765..3523 | + | 759 | WP_000744200.1 | type IV secretion system protein | - |
| M5T24_RS24905 (M5T24_24905) | 3524..3751 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| M5T24_RS24910 (M5T24_24910) | 3761..4894 | + | 1134 | WP_000513459.1 | type IV secretion system protein | - |
| M5T24_RS24915 (M5T24_24915) | 5021..5149 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| M5T24_RS24920 (M5T24_24920) | 5139..5852 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| M5T24_RS24925 (M5T24_24925) | 5857..6786 | + | 930 | WP_000783382.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| M5T24_RS24930 (M5T24_24930) | 6783..7988 | + | 1206 | WP_000139139.1 | hypothetical protein | VF |
| M5T24_RS24935 (M5T24_24935) | 7990..9021 | + | 1032 | WP_001058470.1 | Type IV secretion system protein VirB11 | VF |
| M5T24_RS24940 (M5T24_24940) | 9024..10859 | + | 1836 | WP_000053831.1 | type IV secretory system conjugative DNA transfer family protein | - |
| M5T24_RS24945 (M5T24_24945) | 10856..11269 | + | 414 | WP_072040296.1 | cag pathogenicity island Cag12 family protein | - |
| M5T24_RS24950 (M5T24_24950) | 11266..11568 | + | 303 | WP_000717627.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| M5T24_RS24955 (M5T24_24955) | 11681..11875 | + | 195 | Protein_12 | ATP-binding protein | - |
| M5T24_RS24960 (M5T24_24960) | 11879..12454 | + | 576 | WP_001198969.1 | hypothetical protein | - |
| M5T24_RS24965 (M5T24_24965) | 12459..14612 | + | 2154 | WP_001235755.1 | type IA DNA topoisomerase | - |
| M5T24_RS24970 (M5T24_24970) | 14609..14815 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| M5T24_RS24975 (M5T24_24975) | 14831..15277 | + | 447 | WP_001293138.1 | H-NS family nucleoid-associated regulatory protein | - |
| M5T24_RS24980 (M5T24_24980) | 15360..17264 | + | 1905 | WP_000371262.1 | NACHT domain-containing protein | - |
| M5T24_RS24985 (M5T24_24985) | 17596..18723 | - | 1128 | WP_000156236.1 | hypothetical protein | - |
| M5T24_RS24990 (M5T24_24990) | 19713..19892 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| M5T24_RS24995 (M5T24_24995) | 20279..22180 | - | 1902 | WP_000407091.1 | AAA family ATPase | - |
| M5T24_RS25000 (M5T24_25000) | 22286..22795 | - | 510 | WP_000190049.1 | hypothetical protein | - |
| M5T24_RS25005 (M5T24_25005) | 22879..23217 | - | 339 | WP_001151651.1 | hypothetical protein | - |
| M5T24_RS25010 (M5T24_25010) | 24022..25773 | - | 1752 | Protein_23 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| M5T24_RS25015 (M5T24_25015) | 25777..26169 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| M5T24_RS25020 (M5T24_25020) | 26307..27191 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| M5T24_RS25025 (M5T24_25025) | 27223..28422 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| M5T24_RS25030 (M5T24_25030) | 28528..29178 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| M5T24_RS25035 (M5T24_25035) | 29210..29452 | - | 243 | WP_000844627.1 | transposase | - |
| M5T24_RS25040 (M5T24_25040) | 29615..30160 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| M5T24_RS25045 (M5T24_25045) | 30297..30869 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| M5T24_RS25050 (M5T24_25050) | 30906..32297 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| M5T24_RS25055 (M5T24_25055) | 32330..32758 | + | 429 | Protein_32 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| M5T24_RS25060 (M5T24_25060) | 33077..33733 | - | 657 | WP_064186845.1 | Pentapeptide repeat protein | ARG |
| M5T24_RS25065 (M5T24_25065) | 34128..34744 | + | 617 | Protein_34 | transposase | - |
| M5T24_RS25070 (M5T24_25070) | 34811..35515 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M5T24_RS25075 (M5T24_25075) | 35568..35816 | + | 249 | Protein_36 | hypothetical protein | - |
| M5T24_RS25080 (M5T24_25080) | 35962..36825 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| M5T24_RS25085 (M5T24_25085) | 36959..37663 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M5T24_RS25090 (M5T24_25090) | 37716..39308 | + | 1593 | Protein_39 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| M5T24_RS25095 (M5T24_25095) | 39907..40281 | + | 375 | WP_251569976.1 | hypothetical protein | - |
| M5T24_RS25100 (M5T24_25100) | 40397..40480 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| M5T24_RS25105 (M5T24_25105) | 40635..41279 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| M5T24_RS25110 (M5T24_25110) | 41574..42194 | + | 621 | WP_000864791.1 | ParA family protein | - |
| M5T24_RS25115 (M5T24_25115) | 42246..42476 | + | 231 | WP_000051063.1 | plasmid partition protein ParG | - |
| M5T24_RS25120 (M5T24_25120) | 42581..43278 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| M5T24_RS25125 (M5T24_25125) | 43326..43580 | + | 255 | WP_001354556.1 | hypothetical protein | - |
| M5T24_RS25130 (M5T24_25130) | 44015..44314 | + | 300 | WP_251569978.1 | YcxB family protein | - |
| M5T24_RS25135 (M5T24_25135) | 44418..44609 | + | 192 | WP_187564784.1 | YcxB family protein | - |
| M5T24_RS25140 (M5T24_25140) | 44661..45017 | - | 357 | WP_000876433.1 | DNA distortion polypeptide 3 | - |
| M5T24_RS25145 (M5T24_25145) | 45154..45600 | - | 447 | WP_001074388.1 | hypothetical protein | - |
| M5T24_RS25150 (M5T24_25150) | 45625..46479 | - | 855 | WP_001239324.1 | replication initiation protein | - |
| M5T24_RS25155 (M5T24_25155) | 47541..47792 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| M5T24_RS25160 (M5T24_25160) | 47782..48063 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5T24_RS25165 (M5T24_25165) | 48209..48532 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| M5T24_RS25170 (M5T24_25170) | 48577..48822 | + | 246 | WP_000360030.1 | hypothetical protein | - |
| M5T24_RS25175 (M5T24_25175) | 48812..49027 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| M5T24_RS25180 (M5T24_25180) | 49120..49449 | + | 330 | WP_000866645.1 | hypothetical protein | - |
| M5T24_RS25185 (M5T24_25185) | 49492..49671 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| M5T24_RS25190 (M5T24_25190) | 49741..49890 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| M5T24_RS25195 (M5T24_25195) | 49903..50175 | + | 273 | WP_001354554.1 | hypothetical protein | - |
| M5T24_RS25200 (M5T24_25200) | 50501..51046 | + | 546 | WP_000757692.1 | DNA distortion polypeptide 1 | - |
| M5T24_RS25205 (M5T24_25205) | 51049..52215 | + | 1167 | WP_000539539.1 | hypothetical protein | Relaxase |
| M5T24_RS25210 (M5T24_25210) | 52568..53086 | + | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| M5T24_RS25215 (M5T24_25215) | 53016..53228 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| M5T24_RS25220 (M5T24_25220) | 53261..53908 | + | 648 | WP_000953526.1 | hypothetical protein | VF |
| M5T24_RS25225 (M5T24_25225) | 53886..54182 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|