MGE detailed information
MGE type: Genomic_island MGE length: 14278 bp
Accession: NZ_CP103515 Location: 2336476..2350753 Organism: Escherichia coli strain 5444 Replicon: chromosome
Accession: NZ_CP103515 Location: 2336476..2350753 Organism: Escherichia coli strain 5444 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S96_RS11430 (2336476) | 2336476..2336742 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| M5S96_RS11435 (2336742) | 2336742..2338064 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| M5S96_RS11440 (2338376) | 2338376..2338584 | + | 209 | Protein_2239 | AraC family transcriptional regulator | - |
| M5S96_RS11445 (2338839) | 2338839..2340065 | + | 1227 | Protein_2240 | Outer membrane usher protein FimD | VF |
| M5S96_RS11450 (2340079) | 2340079..2340609 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| M5S96_RS11455 (2340622) | 2340622..2341125 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| M5S96_RS11460 (2341184) | 2341184..2342098 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| M5S96_RS11465 (2342432) | 2342432..2344711 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| M5S96_RS11470 (2344959) | 2344959..2345156 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| M5S96_RS11475 (2345231) | 2345231..2345992 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| M5S96_RS11480 (2346394) | 2346394..2348076 | + | 1683 | WP_001295684.1 | sulfatase | - |
| M5S96_RS11485 (2348128) | 2348128..2349285 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| M5S96_RS11490 (2349251) | 2349251..2349373 | - | 123 | WP_120795387.1 | protein YneP | - |
| M5S96_RS11495 (2349576) | 2349576..2350040 | + | 465 | Protein_2250 | ABC transporter ATP-binding protein/permease | - |
| M5S96_RS11505 (2350781) | 2350781..2352037 | + | 1257 | Protein_2252 | ABC transporter ATP-binding protein/permease | - |
| M5S96_RS11510 (2352075) | 2352075..2354447 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
| M5S96_RS11515 (2354504) | 2354504..2354830 | + | 327 | Protein_2254 | insulinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |