MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65295 bp
Accession: NZ_CP103468 Location: 842904..908198 Organism: Escherichia coli strain 4973 Replicon: chromosome
Accession: NZ_CP103468 Location: 842904..908198 Organism: Escherichia coli strain 4973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S50_RS03975 (839505) | 839505..840653 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| M5S50_RS03980 (840725) | 840725..841708 | - | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| M5S50_RS03985 (842519) | 842519..842689 | - | 171 | Protein_783 | IS110 family transposase | - |
| M5S50_RS03990 (843031) | 843031..843873 | - | 843 | Protein_784 | DUF4942 domain-containing protein | - |
| M5S50_RS03995 (843958) | 843958..844152 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| M5S50_RS04000 (844231) | 844231..844380 | - | 150 | Protein_786 | DUF5983 family protein | - |
| M5S50_RS04005 (844377) | 844377..844754 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5S50_RS04010 (844844) | 844844..845212 | - | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5S50_RS04015 (845375) | 845375..845596 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| M5S50_RS04020 (845661) | 845661..846137 | - | 477 | WP_021553055.1 | RadC family protein | - |
| M5S50_RS04025 (846153) | 846153..846632 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| M5S50_RS04030 (846898) | 846898..847716 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| M5S50_RS04035 (847806) | 847806..848039 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| M5S50_RS04040 (848045) | 848045..848722 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| M5S50_RS04045 (848873) | 848873..849553 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| M5S50_RS04050 (849756) | 849756..850640 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| M5S50_RS04055 (850741) | 850741..851964 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| M5S50_RS04060 (853127) | 853127..853657 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| M5S50_RS04065 (854327) | 854327..855058 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| M5S50_RS04070 (855579) | 855579..856031 | + | 453 | WP_000558152.1 | acyltransferase | - |
| M5S50_RS04075 (856567) | 856567..857502 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| M5S50_RS04080 (857495) | 857495..858430 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| M5S50_RS04085 (858514) | 858514..859764 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| M5S50_RS04090 (859783) | 859783..860877 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| M5S50_RS04095 (862178) | 862178..862744 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| M5S50_RS04100 (863002) | 863002..863577 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| M5S50_RS04105 (863646) | 863646..863879 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| M5S50_RS04110 (863876) | 863876..864001 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| M5S50_RS04115 (864130) | 864130..864192 | + | 63 | Protein_809 | IS3 family transposase IS2 | Transposase |
| M5S50_RS04120 (864178) | 864178..864444 | - | 267 | Protein_810 | IS3 family transposase IS2 | Transposase |
| M5S50_RS04125 (864535) | 864535..865692 | + | 1158 | Protein_811 | Multidrug resistance protein MexB | VF |
| M5S50_RS04130 (865792) | 865792..866463 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| M5S50_RS04135 (866594) | 866594..866779 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| M5S50_RS04140 (867136) | 867136..867681 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| M5S50_RS04145 (867726) | 867726..868877 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| M5S50_RS04150 (869006) | 869006..870061 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| M5S50_RS04155 (870078) | 870078..871340 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| M5S50_RS04160 (871956) | 871956..872477 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| M5S50_RS04165 (872505) | 872505..873044 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| M5S50_RS04170 (873530) | 873530..874435 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| M5S50_RS04175 (874572) | 874572..875489 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| M5S50_RS04180 (875598) | 875598..878150 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| M5S50_RS04185 (878199) | 878199..878774 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| M5S50_RS04190 (878785) | 878785..879084 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| M5S50_RS04195 (879108) | 879108..880625 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| M5S50_RS04200 (880686) | 880686..881471 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| M5S50_RS04205 (881493) | 881493..881774 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| M5S50_RS04210 (882059) | 882059..883255 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| M5S50_RS04215 (883284) | 883284..883781 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| M5S50_RS04220 (883809) | 883809..884078 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| M5S50_RS04225 (884090) | 884090..884815 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| M5S50_RS04230 (884799) | 884799..885557 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| M5S50_RS04235 (885612) | 885612..886298 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| M5S50_RS04240 (886438) | 886438..887556 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| M5S50_RS04245 (887913) | 887913..888413 | + | 501 | Protein_835 | DNA-binding protein | - |
| M5S50_RS04250 (888509) | 888509..888742 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| M5S50_RS04255 (888795) | 888795..888986 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| M5S50_RS04260 (889707) | 889707..889967 | + | 261 | Protein_838 | IS3 family transposase ISLad1 | Transposase |
| M5S50_RS04265 (890110) | 890110..891855 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| M5S50_RS04270 (892011) | 892011..892197 | + | 187 | Protein_840 | hypothetical protein | - |
| M5S50_RS04275 (892249) | 892249..892428 | + | 180 | Protein_841 | hypothetical protein | VF |
| M5S50_RS04280 (892425) | 892425..892838 | + | 414 | Protein_842 | group II intron reverse transcriptase/maturase | - |
| M5S50_RS04285 (892922) | 892922..893401 | + | 480 | Protein_843 | IS3 family transposase IS629 | Transposase |
| M5S50_RS04290 (893413) | 893413..893586 | + | 174 | Protein_844 | hypothetical protein | - |
| M5S50_RS04295 (893599) | 893599..893856 | - | 258 | Protein_845 | IS3 family transposase IS911 | Transposase |
| M5S50_RS04300 (893929) | 893929..894273 | - | 345 | Protein_846 | alcohol dehydrogenase catalytic domain-containing protein | - |
| M5S50_RS04305 (894891) | 894891..895584 | - | 694 | Protein_847 | IS1 family transposase | - |
| M5S50_RS04310 (895837) | 895837..897306 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| M5S50_RS04315 (897411) | 897411..899780 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M5S50_RS04320 (899855) | 899855..901354 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| M5S50_RS04325 (901497) | 901497..902194 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| M5S50_RS04330 (902661) | 902661..903212 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| M5S50_RS04335 (903379) | 903379..904170 | - | 792 | Protein_853 | IS3 family transposase | - |
| M5S50_RS04345 (905414) | 905414..906457 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| M5S50_RS04350 (906713) | 906713..907978 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| M5S50_RS04360 (908357) | 908357..909064 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| M5S50_RS04365 (909217) | 909217..909294 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| M5S50_RS04370 (909457) | 909457..911592 | + | 2136 | WP_022646105.1 | ornithine decarboxylase | - |
| M5S50_RS04375 (911641) | 911641..912897 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|