MGE detailed information
MGE type: Prophage MGE length: 46280 bp
Accession: NZ_CP103468 Location: 4689752..4736031 Organism: Escherichia coli strain 4973 Replicon: chromosome
Accession: NZ_CP103468 Location: 4689752..4736031 Organism: Escherichia coli strain 4973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S50_RS22665 (4684807) | 4684807..4685223 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| M5S50_RS22670 (4685334) | 4685334..4686047 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| M5S50_RS22675 (4686448) | 4686448..4686670 | + | 223 | Protein_4444 | hypothetical protein | - |
| M5S50_RS22680 (4687174) | 4687174..4688367 | - | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| M5S50_RS22685 (4688620) | 4688620..4689699 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| M5S50_RS22690 (4689752) | 4689752..4691167 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| M5S50_RS22695 (4691250) | 4691250..4692233 | + | 984 | WP_022646433.1 | Quinone oxidoreductase 1 | VF |
| M5S50_RS22700 (4692399) | 4692399..4692641 | - | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| M5S50_RS22705 (4692775) | 4692775..4693812 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| M5S50_RS22710 (4693901) | 4693901..4694998 | + | 1098 | WP_000332264.1 | hypothetical protein ; Integrase | Integrase |
| M5S50_RS22715 (4695060) | 4695060..4695308 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| M5S50_RS22720 (4695305) | 4695305..4695376 | - | 72 | Protein_4453 | capsid protein | - |
| M5S50_RS22725 (4695551) | 4695551..4696720 | + | 1170 | WP_157915790.1 | acyltransferase | - |
| M5S50_RS22730 (4696732) | 4696732..4697331 | - | 600 | WP_069904755.1 | tail fiber assembly protein | - |
| M5S50_RS22735 (4697331) | 4697331..4698035 | - | 705 | WP_089438600.1 | tail fiber protein | - |
| M5S50_RS22740 (4698039) | 4698039..4698623 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| M5S50_RS22745 (4698614) | 4698614..4699672 | - | 1059 | WP_089438601.1 | baseplate J/gp47 family protein | - |
| M5S50_RS22750 (4699659) | 4699659..4700084 | - | 426 | WP_000424747.1 | phage GP46 family protein | - |
| M5S50_RS22755 (4700084) | 4700084..4700632 | - | 549 | WP_001259084.1 | phage baseplate assembly protein V | - |
| M5S50_RS22760 (4700632) | 4700632..4701711 | - | 1080 | WP_000999518.1 | baseplate protein | - |
| M5S50_RS22765 (4701708) | 4701708..4703036 | - | 1329 | WP_124939316.1 | DNA circularization N-terminal domain-containing protein | - |
| M5S50_RS22770 (4703097) | 4703097..4704932 | - | 1836 | WP_089438603.1 | phage tail tape measure protein | - |
| M5S50_RS22775 (4705074) | 4705074..4705343 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| M5S50_RS22780 (4705343) | 4705343..4705699 | - | 357 | WP_000090997.1 | phage tail tube protein | - |
| M5S50_RS22785 (4705699) | 4705699..4707195 | - | 1497 | WP_000155710.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M5S50_RS22790 (4707179) | 4707179..4707349 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| M5S50_RS22795 (4707358) | 4707358..4707918 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| M5S50_RS22800 (4707915) | 4707915..4708421 | - | 507 | WP_073461653.1 | hypothetical protein | - |
| M5S50_RS22805 (4708396) | 4708396..4708806 | - | 411 | WP_089438605.1 | phage head closure protein | - |
| M5S50_RS22810 (4708803) | 4708803..4709126 | - | 324 | WP_000924829.1 | head-tail connector protein | - |
| M5S50_RS22815 (4709205) | 4709205..4710434 | - | 1230 | WP_000766100.1 | phage major capsid protein | - |
| M5S50_RS22820 (4710445) | 4710445..4711047 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| M5S50_RS22825 (4711040) | 4711040..4712266 | - | 1227 | WP_113914540.1 | phage portal protein | - |
| M5S50_RS22830 (4712256) | 4712256..4712417 | - | 162 | WP_000838374.1 | hypothetical protein | - |
| M5S50_RS22835 (4712414) | 4712414..4714147 | - | 1734 | WP_000088158.1 | terminase large subunit | - |
| M5S50_RS22840 (4714161) | 4714161..4714646 | - | 486 | WP_000929174.1 | phage terminase small subunit P27 family | - |
| M5S50_RS22845 (4714772) | 4714772..4715122 | - | 351 | WP_001135093.1 | HNH endonuclease signature motif containing protein | - |
| M5S50_RS22850 (4715346) | 4715346..4715498 | - | 153 | WP_001139680.1 | hypothetical protein | - |
| M5S50_RS22855 (4715486) | 4715486..4715953 | - | 468 | WP_001393971.1 | lysis protein | - |
| M5S50_RS22860 (4715950) | 4715950..4716426 | - | 477 | WP_001393970.1 | glycoside hydrolase family protein | - |
| M5S50_RS22865 (4716430) | 4716430..4716771 | - | 342 | WP_000781785.1 | phage holin, lambda family | - |
| M5S50_RS22870 (4716903) | 4716903..4717145 | - | 243 | WP_089438607.1 | hypothetical protein | - |
| M5S50_RS22875 (4717434) | 4717434..4718186 | - | 753 | WP_015967852.1 | antitermination protein | - |
| M5S50_RS22880 (4718200) | 4718200..4719189 | - | 990 | WP_032176009.1 | DUF968 domain-containing protein | - |
| M5S50_RS22885 (4719197) | 4719197..4720006 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| M5S50_RS22890 (4720026) | 4720026..4720415 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M5S50_RS22895 (4720412) | 4720412..4720738 | - | 327 | WP_021513308.1 | LexA repressor | - |
| M5S50_RS22900 (4720735) | 4720735..4721388 | - | 654 | WP_001343335.1 | phage N-6-adenine-methyltransferase | - |
| M5S50_RS22905 (4721388) | 4721388..4721882 | - | 495 | WP_072178178.1 | PerC family transcriptional regulator | - |
| M5S50_RS22910 (4721879) | 4721879..4722871 | - | 993 | WP_016241752.1 | hypothetical protein | - |
| M5S50_RS22915 (4722828) | 4722828..4723040 | - | 213 | WP_089438608.1 | DUF4222 domain-containing protein | - |
| M5S50_RS22920 (4723216) | 4723216..4723800 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| M5S50_RS22925 (4723828) | 4723828..4724025 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| M5S50_RS22930 (4724121) | 4724121..4724774 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| M5S50_RS22935 (4725201) | 4725201..4725446 | - | 246 | WP_000141753.1 | hypothetical protein | - |
| M5S50_RS22940 (4725559) | 4725559..4725869 | + | 311 | Protein_4497 | hypothetical protein | - |
| M5S50_RS22945 (4725884) | 4725884..4726246 | + | 363 | WP_000135682.1 | protein YfdP | - |
| M5S50_RS22950 (4726312) | 4726312..4727136 | + | 825 | WP_089438609.1 | DUF2303 family protein | - |
| M5S50_RS22955 (4727264) | 4727264..4727800 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| M5S50_RS22960 (4727791) | 4727791..4728153 | + | 363 | WP_001565177.1 | phage protein | - |
| M5S50_RS22965 (4728153) | 4728153..4728962 | + | 810 | WP_000206745.1 | hypothetical protein | - |
| M5S50_RS22970 (4728962) | 4728962..4729534 | + | 573 | WP_001061348.1 | 3'-5' exonuclease | - |
| M5S50_RS22975 (4729571) | 4729571..4729852 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| M5S50_RS22980 (4729900) | 4729900..4730073 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| M5S50_RS22985 (4730113) | 4730113..4730499 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| M5S50_RS22990 (4730529) | 4730529..4731038 | - | 510 | WP_001339382.1 | Panacea domain-containing protein | Antitoxin Detail |
| M5S50_RS22995 (4731355) | 4731355..4731459 | - | 105 | Protein_4508 | tRNA-dihydrouridine synthase | - |
| M5S50_RS23000 (4731821) | 4731821..4732825 | - | 1005 | WP_022646425.1 | DUF2713 family protein | - |
| M5S50_RS23005 (4733143) | 4733143..4733658 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| M5S50_RS23010 (4733700) | 4733700..4733909 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| M5S50_RS23015 (4734025) | 4734025..4735350 | - | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| M5S50_RS23020 (4735423) | 4735423..4736031 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| M5S50_RS23025 (4736141) | 4736141..4736509 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| M5S50_RS23030 (4736680) | 4736680..4739103 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| M5S50_RS23035 (4739258) | 4739258..4740130 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| M5S50_RS23040 (4740143) | 4740143..4740640 | - | 498 | WP_001308201.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|