MGE detailed information
MGE type: Genomic_island MGE length: 50759 bp
Accession: NZ_CP103468 Location: 4544486..4595244 Organism: Escherichia coli strain 4973 Replicon: chromosome
Accession: NZ_CP103468 Location: 4544486..4595244 Organism: Escherichia coli strain 4973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S50_RS22040 (4541267) | 4541267..4542766 | - | 1500 | WP_073544108.1 | phosphoethanolamine transferase | - |
| M5S50_RS22045 (4542941) | 4542941..4543687 | - | 747 | WP_077900207.1 | invasion outer membrane protein Tia | - |
| M5S50_RS22050 (4543910) | 4543910..4544095 | + | 186 | Protein_4319 | integrase | - |
| M5S50_RS22055 (4544486) | 4544486..4546075 | + | 1590 | WP_073544106.1 | SIR2 family protein | - |
| M5S50_RS22060 (4546200) | 4546200..4547270 | - | 1071 | WP_001438891.1 | restriction endonuclease subunit S | - |
| M5S50_RS22065 (4547279) | 4547279..4548913 | - | 1635 | WP_000627731.1 | class I SAM-dependent DNA methyltransferase | - |
| M5S50_RS22070 (4548977) | 4548977..4552390 | - | 3414 | WP_073544105.1 | DEAD/DEAH box helicase family protein | - |
| M5S50_RS22075 (4553013) | 4553013..4554175 | + | 1163 | WP_114143995.1 | IS3 family transposase ISEc17 | Transposase |
| M5S50_RS22080 (4554201) | 4554201..4554320 | + | 120 | Protein_4325 | IS1 family transposase | - |
| M5S50_RS22085 (4554336) | 4554336..4554626 | + | 291 | Protein_4326 | hypothetical protein | - |
| M5S50_RS22090 (4555053) | 4555053..4555397 | + | 345 | WP_230139588.1 | CPBP family intramembrane metalloprotease | - |
| M5S50_RS22095 (4555708) | 4555708..4556673 | - | 966 | WP_073544102.1 | hypothetical protein | - |
| M5S50_RS22100 (4556781) | 4556781..4559015 | - | 2235 | WP_259423571.1 | exopolygalacturonate lyase | - |
| M5S50_RS22105 (4559017) | 4559017..4560531 | - | 1515 | WP_000134159.1 | MFS transporter | - |
| M5S50_RS22110 (4560897) | 4560897..4561220 | - | 324 | WP_000497518.1 | cupin domain-containing protein | - |
| M5S50_RS22115 (4561275) | 4561275..4562075 | - | 801 | WP_000345753.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| M5S50_RS22120 (4562108) | 4562108..4563277 | - | 1170 | WP_001051736.1 | oligogalacturonate lyase family protein | - |
| M5S50_RS22125 (4563519) | 4563519..4564157 | + | 639 | WP_000684813.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| M5S50_RS22130 (4564408) | 4564408..4564656 | - | 249 | WP_000958093.1 | AlpA family transcriptional regulator | - |
| M5S50_RS22135 (4564725) | 4564725..4565297 | - | 573 | WP_000991605.1 | hypothetical protein | - |
| M5S50_RS22140 (4565557) | 4565557..4566123 | - | 567 | WP_073544099.1 | inovirus-type Gp2 protein | - |
| M5S50_RS22145 (4567460) | 4567460..4568554 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| M5S50_RS22150 (4568573) | 4568573..4569823 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| M5S50_RS22155 (4569907) | 4569907..4570842 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| M5S50_RS22160 (4570835) | 4570835..4571770 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| M5S50_RS22165 (4572306) | 4572306..4572758 | - | 453 | WP_000558152.1 | acyltransferase | - |
| M5S50_RS22170 (4573279) | 4573279..4574010 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| M5S50_RS22175 (4574680) | 4574680..4575210 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| M5S50_RS22180 (4576373) | 4576373..4577596 | - | 1224 | WP_001107215.1 | hypothetical protein | - |
| M5S50_RS22185 (4577697) | 4577697..4578581 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| M5S50_RS22190 (4578784) | 4578784..4579464 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| M5S50_RS22195 (4579612) | 4579612..4580289 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| M5S50_RS22200 (4580295) | 4580295..4580528 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| M5S50_RS22205 (4580618) | 4580618..4581436 | + | 819 | WP_023909075.1 | DUF932 domain-containing protein | - |
| M5S50_RS22210 (4581528) | 4581528..4582013 | + | 486 | WP_001586019.1 | antirestriction protein | - |
| M5S50_RS22215 (4582029) | 4582029..4582505 | + | 477 | WP_001186773.1 | RadC family protein | - |
| M5S50_RS22220 (4582568) | 4582568..4582789 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| M5S50_RS22225 (4582952) | 4582952..4583320 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5S50_RS22230 (4583410) | 4583410..4583784 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5S50_RS22235 (4583781) | 4583781..4584269 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| M5S50_RS22240 (4584281) | 4584281..4584478 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| M5S50_RS22245 (4584575) | 4584575..4585144 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| M5S50_RS22250 (4585893) | 4585893..4587431 | + | 1539 | WP_023908864.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5S50_RS22255 (4587797) | 4587797..4589131 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| M5S50_RS22260 (4589211) | 4589211..4591358 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| M5S50_RS22265 (4591417) | 4591417..4592874 | + | 1458 | WP_022646457.1 | dipeptide/tripeptide permease DtpC | - |
| M5S50_RS22270 (4593111) | 4593111..4594628 | + | 1518 | WP_022646456.1 | lysine--tRNA ligase | - |
| M5S50_RS22275 (4594747) | 4594747..4594920 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5S50_RS22280 (4594948) | 4594948..4595244 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5S50_RS22285 (4595473) | 4595473..4595745 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| M5S50_RS22290 (4595757) | 4595757..4595986 | - | 230 | Protein_4367 | (4Fe-4S)-binding protein | - |
| M5S50_RS22295 (4596167) | 4596167..4597798 | + | 1632 | WP_022646455.1 | sensor histidine kinase | - |
| M5S50_RS22300 (4597795) | 4597795..4598514 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|