MGE detailed information
MGE type: Genomic_island MGE length: 26199 bp
Accession: NZ_CP103465 Location: 3615455..3641653 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Accession: NZ_CP103465 Location: 3615455..3641653 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T42_RS17555 (3613290) | 3613290..3613502 | + | 213 | Protein_3441 | MFS transporter | - |
| M5T42_RS17565 (3614271) | 3614271..3614408 | + | 138 | Protein_3443 | aldo/keto reductase | - |
| M5T42_RS17570 (3614435) | 3614435..3615424 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| M5T42_RS17575 (3615455) | 3615455..3616348 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| M5T42_RS17580 (3616548) | 3616548..3617474 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| M5T42_RS17585 (3617631) | 3617631..3618551 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| M5T42_RS17590 (3618724) | 3618724..3619866 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| M5T42_RS17595 (3620339) | 3620339..3620440 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| M5T42_RS17600 (3620805) | 3620805..3621068 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| M5T42_RS17605 (3621068) | 3621068..3621208 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| M5T42_RS17610 (3621278) | 3621278..3621468 | - | 191 | Protein_3452 | hypothetical protein | - |
| M5T42_RS17615 (3622292) | 3622292..3622834 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| M5T42_RS17620 (3622909) | 3622909..3623496 | + | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| M5T42_RS17625 (3623553) | 3623553..3624221 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| M5T42_RS17630 (3624247) | 3624247..3626772 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| M5T42_RS17635 (3626762) | 3626762..3628405 | + | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| M5T42_RS17640 (3628374) | 3628374..3629084 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| M5T42_RS17645 (3629391) | 3629391..3629720 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| M5T42_RS17650 (3629732) | 3629732..3629898 | - | 167 | Protein_3460 | tail fiber assembly protein | - |
| M5T42_RS17655 (3629969) | 3629969..3630583 | - | 615 | WP_001019923.1 | YagU family protein | - |
| M5T42_RS17660 (3630798) | 3630798..3630983 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| M5T42_RS17665 (3631032) | 3631032..3631190 | + | 159 | Protein_3463 | integrase | - |
| M5T42_RS17670 (3631417) | 3631417..3631752 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| M5T42_RS17675 (3631960) | 3631960..3632736 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| M5T42_RS17680 (3632901) | 3632901..3633821 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| M5T42_RS17685 (3633808) | 3633808..3634590 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| M5T42_RS17690 (3634874) | 3634874..3637972 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| M5T42_RS17695 (3637966) | 3637966..3639603 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| M5T42_RS17700 (3639593) | 3639593..3640840 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| M5T42_RS17705 (3641047) | 3641047..3641205 | + | 159 | WP_071550417.1 | ash family protein | - |
| M5T42_RS17710 (3641183) | 3641183..3641653 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| M5T42_RS17715 (3641799) | 3641799..3642002 | + | 204 | Protein_3473 | integrase | - |
| M5T42_RS17725 (3642207) | 3642207..3643460 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| M5T42_RS17730 (3643472) | 3643472..3644575 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| M5T42_RS17735 (3644864) | 3644864..3645919 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| M5T42_RS17740 (3645958) | 3645958..3646359 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|