MGE detailed information
MGE type: Prophage MGE length: 60003 bp
Accession: NZ_CP103465 Location: 2786900..2846902 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Accession: NZ_CP103465 Location: 2786900..2846902 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T42_RS13435 (2781984) | 2781984..2783354 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| M5T42_RS13440 (2783523) | 2783523..2784194 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| M5T42_RS13445 (2784194) | 2784194..2785654 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| M5T42_RS13450 (2785730) | 2785730..2786851 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| M5T42_RS13455 (2786900) | 2786900..2788126 | - | 1227 | WP_001545930.1 | peptidase T | - |
| M5T42_RS13460 (2788376) | 2788376..2789512 | + | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| M5T42_RS13465 (2789496) | 2789496..2790359 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| M5T42_RS13470 (2790591) | 2790591..2790764 | - | 174 | Protein_2643 | tail fiber assembly protein | - |
| M5T42_RS13475 (2790914) | 2790914..2791582 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| M5T42_RS13480 (2791637) | 2791637..2792221 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| M5T42_RS13485 (2792221) | 2792221..2795247 | - | 3027 | WP_000216487.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5T42_RS13490 (2795399) | 2795399..2795998 | - | 600 | WP_001610945.1 | Outer membrane protein X | VF |
| M5T42_RS13495 (2796066) | 2796066..2799758 | - | 3693 | WP_001610944.1 | phage tail protein | - |
| M5T42_RS13500 (2800102) | 2800102..2800683 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| M5T42_RS13505 (2800680) | 2800680..2801423 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| M5T42_RS13510 (2801434) | 2801434..2802132 | - | 699 | WP_001309428.1 | phage minor tail protein L | - |
| M5T42_RS13515 (2802132) | 2802132..2802461 | - | 330 | WP_000847298.1 | phage tail protein | - |
| M5T42_RS13520 (2802458) | 2802458..2805019 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| M5T42_RS13525 (2805000) | 2805000..2805413 | - | 414 | WP_000533401.1 | phage tail assembly protein T | - |
| M5T42_RS13530 (2805440) | 2805440..2805871 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| M5T42_RS13535 (2805890) | 2805890..2806639 | - | 750 | WP_000235047.1 | phage tail protein | - |
| M5T42_RS13540 (2806647) | 2806647..2807042 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| M5T42_RS13545 (2807039) | 2807039..2807572 | - | 534 | WP_000974996.1 | phage tail protein | - |
| M5T42_RS13550 (2807588) | 2807588..2807941 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| M5T42_RS13555 (2807934) | 2807934..2808308 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| M5T42_RS13560 (2808360) | 2808360..2809388 | - | 1029 | WP_000522603.1 | major capsid protein | - |
| M5T42_RS13565 (2809446) | 2809446..2809793 | - | 348 | WP_000256814.1 | head decoration protein | - |
| M5T42_RS13570 (2809830) | 2809830..2811335 | - | 1506 | WP_001611311.1 | S49 family peptidase | - |
| M5T42_RS13575 (2811325) | 2811325..2812917 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| M5T42_RS13580 (2812914) | 2812914..2813120 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| M5T42_RS13585 (2813104) | 2813104..2815032 | - | 1929 | WP_001610650.1 | phage terminase large subunit family protein | - |
| M5T42_RS13590 (2815004) | 2815004..2815513 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| M5T42_RS13595 (2816128) | 2816128..2816265 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| M5T42_RS13600 (2816472) | 2816472..2816798 | - | 327 | WP_000830178.1 | TonB family protein | - |
| M5T42_RS13605 (2817109) | 2817109..2817576 | - | 468 | WP_032142285.1 | lysis protein | - |
| M5T42_RS13610 (2817579) | 2817579..2817710 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| M5T42_RS13615 (2817725) | 2817725..2817907 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| M5T42_RS13620 (2818064) | 2818064..2818597 | - | 534 | WP_001092866.1 | lysozyme | - |
| M5T42_RS13625 (2819189) | 2819189..2819524 | - | 336 | Protein_2674 | YdfR family protein | - |
| M5T42_RS13630 (2819529) | 2819529..2819744 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| M5T42_RS13635 (2819821) | 2819821..2820066 | - | 246 | WP_001538590.1 | DUF826 domain-containing protein | - |
| M5T42_RS13640 (2820104) | 2820104..2820286 | - | 183 | WP_023143432.1 | DUF1378 family protein | - |
| M5T42_RS13645 (2820423) | 2820423..2822384 | - | 1962 | WP_001610646.1 | SASA family carbohydrate esterase | - |
| M5T42_RS13650 (2822645) | 2822645..2822980 | + | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| M5T42_RS13655 (2822986) | 2822986..2823393 | - | 408 | WP_259409824.1 | hypothetical protein | - |
| M5T42_RS13660 (2823365) | 2823365..2823562 | - | 198 | WP_000917765.1 | hypothetical protein | - |
| M5T42_RS13665 (2823787) | 2823787..2824341 | - | 555 | WP_000640021.1 | DUF1133 family protein | - |
| M5T42_RS13670 (2824350) | 2824350..2824709 | - | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M5T42_RS13675 (2824722) | 2824722..2825768 | - | 1047 | WP_001610645.1 | DUF968 domain-containing protein | - |
| M5T42_RS13680 (2825770) | 2825770..2826048 | - | 279 | WP_032141837.1 | hypothetical protein | - |
| M5T42_RS13685 (2826215) | 2826215..2826370 | - | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| M5T42_RS13690 (2827054) | 2827054..2827443 | - | 390 | WP_001556926.1 | hypothetical protein | - |
| M5T42_RS13695 (2827440) | 2827440..2827616 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| M5T42_RS13700 (2827609) | 2827609..2827791 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| M5T42_RS13705 (2827885) | 2827885..2828241 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| M5T42_RS13710 (2828219) | 2828219..2828362 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| M5T42_RS13715 (2828373) | 2828373..2828636 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| M5T42_RS13720 (2828638) | 2828638..2828856 | - | 219 | WP_001610644.1 | DUF4014 family protein | - |
| M5T42_RS13725 (2828889) | 2828889..2829101 | - | 213 | WP_000072553.1 | hypothetical protein | - |
| M5T42_RS13730 (2829207) | 2829207..2829629 | - | 423 | Protein_2695 | DUF977 family protein | - |
| M5T42_RS13735 (2829645) | 2829645..2830415 | - | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| M5T42_RS13740 (2830437) | 2830437..2831183 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| M5T42_RS13745 (2831190) | 2831190..2832152 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| M5T42_RS13750 (2832175) | 2832175..2832600 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| M5T42_RS13755 (2832597) | 2832597..2832899 | - | 303 | WP_001556930.1 | transcriptional regulator | - |
| M5T42_RS13760 (2832997) | 2832997..2833368 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| M5T42_RS13765 (2833389) | 2833389..2833580 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| M5T42_RS13770 (2833582) | 2833582..2833860 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5T42_RS13775 (2834151) | 2834151..2834303 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| M5T42_RS13780 (2834315) | 2834315..2834653 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| M5T42_RS13785 (2834642) | 2834642..2834836 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| M5T42_RS13790 (2835412) | 2835412..2835600 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| M5T42_RS13795 (2835597) | 2835597..2835785 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| M5T42_RS13800 (2835878) | 2835878..2838316 | + | 2439 | WP_000102132.1 | exonuclease | - |
| M5T42_RS13805 (2838378) | 2838378..2838647 | + | 270 | WP_000003742.1 | excisionase | - |
| M5T42_RS13810 (2838616) | 2838616..2839734 | + | 1119 | WP_259409811.1 | hypothetical protein ; Integrase | Integrase |
| M5T42_RS13815 (2839901) | 2839901..2840695 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| M5T42_RS13820 (2840692) | 2840692..2841738 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| M5T42_RS13825 (2841796) | 2841796..2842257 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| M5T42_RS13830 (2842254) | 2842254..2843042 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| M5T42_RS13835 (2843180) | 2843180..2844001 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| M5T42_RS13840 (2844017) | 2844017..2844928 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| M5T42_RS13845 (2844957) | 2844957..2846201 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| M5T42_RS13850 (2846201) | 2846201..2846902 | - | 702 | WP_001033695.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| M5T42_RS13855 (2846895) | 2846895..2848094 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| M5T42_RS13860 (2848355) | 2848355..2849428 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|