MGE detailed information
MGE type: Prophage MGE length: 65870 bp
Accession: NZ_CP102962 Location: 1554421..1620290 Organism: Staphylococcus aureus strain 16CS0212 Replicon: chromosome
Accession: NZ_CP102962 Location: 1554421..1620290 Organism: Staphylococcus aureus strain 16CS0212 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW971_RS07470 (NW971_07470) | 1550689..1552068 | - | 1380 | WP_000902117.1 | ATP-dependent DNA helicase RecQ | - |
| NW971_RS07475 (NW971_07475) | 1552058..1553011 | - | 954 | WP_258464257.1 | helix-turn-helix domain-containing protein | - |
| NW971_RS07480 (NW971_07480) | 1553119..1553367 | + | 249 | WP_001151997.1 | ferredoxin | - |
| NW971_RS07485 (NW971_07485) | 1553473..1554018 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| NW971_RS07490 (NW971_07490) | 1554297..1554386 | - | 90 | Protein_1468 | hypothetical protein | - |
| NW971_RS07495 (NW971_07495) | 1554421..1555353 | - | 933 | WP_001813197.1 | DUF1672 domain-containing protein | - |
| NW971_RS07500 (NW971_07500) | 1555808..1556716 | - | 909 | WP_029753718.1 | DUF1672 domain-containing protein | - |
| NW971_RS07505 (NW971_07505) | 1556806..1557021 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| NW971_RS07510 (NW971_07510) | 1557743..1559197 | - | 1455 | WP_000930261.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NW971_RS07515 (NW971_07515) | 1559209..1559511 | - | 303 | WP_000339142.1 | phage holin | - |
| NW971_RS07520 (NW971_07520) | 1559647..1559946 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| NW971_RS07525 (NW971_07525) | 1559992..1560156 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| NW971_RS07530 (NW971_07530) | 1560149..1560538 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| NW971_RS07535 (NW971_07535) | 1560538..1562004 | - | 1467 | WP_000067145.1 | BppU family phage baseplate upper protein | - |
| NW971_RS07540 (NW971_07540) | 1562004..1563914 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| NW971_RS07545 (NW971_07545) | 1563930..1564220 | - | 291 | WP_000179864.1 | hypothetical protein | - |
| NW971_RS07550 (NW971_07550) | 1564220..1565803 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| NW971_RS07555 (NW971_07555) | 1565812..1566636 | - | 825 | WP_031927876.1 | phage tail family protein | - |
| NW971_RS07560 (NW971_07560) | 1566636..1572836 | - | 6201 | WP_258464258.1 | phage tail tape measure protein | - |
| NW971_RS07565 (NW971_07565) | 1572850..1573008 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| NW971_RS07570 (NW971_07570) | 1573050..1573400 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| NW971_RS07575 (NW971_07575) | 1573458..1573913 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| NW971_RS07580 (NW971_07580) | 1574005..1574646 | - | 642 | WP_000807536.1 | phage tail protein | - |
| NW971_RS07585 (NW971_07585) | 1574681..1575076 | - | 396 | WP_031927878.1 | DUF3168 domain-containing protein | - |
| NW971_RS07590 (NW971_07590) | 1575077..1575478 | - | 402 | WP_031927879.1 | hypothetical protein | - |
| NW971_RS07595 (NW971_07595) | 1575475..1575807 | - | 333 | WP_031927880.1 | hypothetical protein | - |
| NW971_RS07600 (NW971_07600) | 1575819..1576097 | - | 279 | WP_031887651.1 | head-tail connector protein | - |
| NW971_RS07605 (NW971_07605) | 1576166..1577329 | - | 1164 | WP_031920898.1 | phage major capsid protein | - |
| NW971_RS07610 (NW971_07610) | 1577341..1578114 | - | 774 | WP_258464259.1 | Clp protease ClpP | - |
| NW971_RS07615 (NW971_07615) | 1578098..1579336 | - | 1239 | WP_031776078.1 | phage portal protein | - |
| NW971_RS07620 (NW971_07620) | 1579341..1581032 | - | 1692 | WP_031927881.1 | terminase large subunit | - |
| NW971_RS07625 (NW971_07625) | 1581022..1581327 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| NW971_RS07630 (NW971_07630) | 1581438..1581752 | - | 315 | WP_015986203.1 | HNH endonuclease | - |
| NW971_RS07635 (NW971_07635) | 1581909..1582346 | - | 438 | WP_031838296.1 | transcriptional regulator | - |
| NW971_RS07640 (NW971_07640) | 1582359..1583726 | - | 1368 | WP_078098544.1 | DEAD/DEAH box helicase | - |
| NW971_RS07645 (NW971_07645) | 1583707..1583997 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| NW971_RS07650 (NW971_07650) | 1584131..1584235 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| NW971_RS07655 (NW971_07655) | 1584338..1586785 | - | 2448 | WP_031927883.1 | virulence-associated E family protein | - |
| NW971_RS07660 (NW971_07660) | 1586837..1587037 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| NW971_RS07665 (NW971_07665) | 1587105..1587257 | - | 153 | WP_031875401.1 | transcriptional regulator | - |
| NW971_RS07670 (NW971_07670) | 1587250..1587486 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| NW971_RS07675 (NW971_07675) | 1587511..1587747 | - | 237 | WP_031927884.1 | DUF1381 domain-containing protein | - |
| NW971_RS07680 (NW971_07680) | 1587784..1588320 | - | 537 | WP_015984517.1 | dUTPase | - |
| NW971_RS07685 (NW971_07685) | 1588313..1588483 | - | 171 | WP_000714413.1 | hypothetical protein | - |
| NW971_RS07690 (NW971_07690) | 1588470..1588724 | - | 255 | WP_017804684.1 | DUF1024 family protein | - |
| NW971_RS07695 (NW971_07695) | 1588717..1589082 | - | 366 | WP_001624703.1 | hypothetical protein | - |
| NW971_RS07700 (NW971_07700) | 1589079..1589528 | - | 450 | WP_000982708.1 | YopX family protein | - |
| NW971_RS07705 (NW971_07705) | 1589593..1589841 | - | 249 | WP_015986193.1 | SAV1978 family virulence-associated passenger protein | - |
| NW971_RS07710 (NW971_07710) | 1589850..1590050 | - | 201 | WP_015986192.1 | hypothetical protein | - |
| NW971_RS07715 (NW971_07715) | 1590053..1590310 | - | 258 | WP_031927885.1 | DUF3310 domain-containing protein | - |
| NW971_RS07720 (NW971_07720) | 1590310..1590711 | - | 402 | WP_031927886.1 | SA1788 family PVL leukocidin-associated protein | - |
| NW971_RS07725 (NW971_07725) | 1590711..1590896 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| NW971_RS07730 (NW971_07730) | 1590909..1592861 | - | 1953 | WP_078098546.1 | DNA polymerase | - |
| NW971_RS07735 (NW971_07735) | 1592930..1593487 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| NW971_RS07740 (NW971_07740) | 1593513..1594679 | - | 1167 | WP_000762530.1 | DUF2800 domain-containing protein | - |
| NW971_RS07745 (NW971_07745) | 1594676..1595038 | - | 363 | WP_000985986.1 | hypothetical protein | - |
| NW971_RS07750 (NW971_07750) | 1595053..1595376 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| NW971_RS07755 (NW971_07755) | 1595456..1595617 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| NW971_RS07760 (NW971_07760) | 1595630..1595893 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| NW971_RS07765 (NW971_07765) | 1595918..1596133 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| NW971_RS07770 (NW971_07770) | 1596188..1596553 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| NW971_RS07775 (NW971_07775) | 1596522..1596767 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| NW971_RS07780 (NW971_07780) | 1596834..1597214 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| NW971_RS07785 (NW971_07785) | 1597201..1597398 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| NW971_RS07790 (NW971_07790) | 1597468..1597680 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| NW971_RS07795 (NW971_07795) | 1597721..1597870 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| NW971_RS07800 (NW971_07800) | 1597885..1598328 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| NW971_RS07805 (NW971_07805) | 1598345..1598569 | - | 225 | WP_000333485.1 | DUF739 family protein | - |
| NW971_RS07810 (NW971_07810) | 1598731..1599111 | + | 381 | WP_001089477.1 | helix-turn-helix domain-containing protein | - |
| NW971_RS07815 (NW971_07815) | 1599133..1599591 | + | 459 | WP_001558059.1 | hypothetical protein | - |
| NW971_RS07820 (NW971_07820) | 1599609..1600043 | + | 435 | WP_000755718.1 | hypothetical protein | - |
| NW971_RS07825 (NW971_07825) | 1600072..1600467 | + | 396 | WP_001558060.1 | hypothetical protein | - |
| NW971_RS07830 (NW971_07830) | 1600557..1600703 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| NW971_RS07835 (NW971_07835) | 1600700..1601314 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| NW971_RS07840 (NW971_07840) | 1601440..1602645 | + | 1206 | WP_000264751.1 | site-specific integrase | - |
| NW971_RS07845 (NW971_07845) | 1602688..1604724 | - | 2037 | WP_258464260.1 | hypothetical protein | - |
| NW971_RS07850 (NW971_07850) | 1604727..1605644 | - | 918 | WP_258464261.1 | DUF1672 domain-containing protein | - |
| NW971_RS07855 (NW971_07855) | 1605896..1607647 | - | 1752 | WP_258464262.1 | two-component system sensor histidine kinase SrrB | - |
| NW971_RS07860 (NW971_07860) | 1607628..1608353 | - | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| NW971_RS07865 (NW971_07865) | 1608486..1609223 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| NW971_RS07870 (NW971_07870) | 1609216..1609758 | - | 543 | WP_000368650.1 | SMC-Scp complex subunit ScpB | - |
| NW971_RS07875 (NW971_07875) | 1609751..1610482 | - | 732 | WP_000273372.1 | segregation/condensation protein A | - |
| NW971_RS07880 (NW971_07880) | 1610574..1611080 | + | 507 | WP_258464263.1 | DUF309 domain-containing protein | - |
| NW971_RS07885 (NW971_07885) | 1611158..1612045 | - | 888 | WP_000447733.1 | site-specific tyrosine recombinase XerD | - |
| NW971_RS07890 (NW971_07890) | 1612094..1612543 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| NW971_RS07895 (NW971_07895) | 1612648..1613190 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| NW971_RS07900 (NW971_07900) | 1613272..1614180 | + | 909 | WP_001171341.1 | aldo/keto reductase | - |
| NW971_RS07905 (NW971_07905) | 1614396..1614644 | - | 249 | WP_111762322.1 | hypothetical protein | - |
| NW971_RS07910 (NW971_07910) | 1614660..1615415 | - | 756 | WP_111762323.1 | SDR family oxidoreductase | - |
| NW971_RS07915 (NW971_07915) | 1615557..1616372 | + | 816 | WP_000779746.1 | pyrroline-5-carboxylate reductase | - |
| NW971_RS07920 (NW971_07920) | 1616477..1617397 | - | 921 | WP_111762324.1 | ribonuclease Z | - |
| NW971_RS07925 (NW971_07925) | 1617710..1619194 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| NW971_RS07930 (NW971_07930) | 1619424..1620290 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| NW971_RS07935 (NW971_07935) | 1620373..1622022 | - | 1650 | WP_001041927.1 | alpha-glucosidase | - |
| NW971_RS07940 (NW971_07940) | 1622038..1623057 | - | 1020 | WP_258464265.1 | LacI family DNA-binding transcriptional regulator | - |
| NW971_RS07945 (NW971_07945) | 1623058..1623312 | - | 255 | WP_111762326.1 | hypothetical protein | - |
| NW971_RS07950 (NW971_07950) | 1623251..1623622 | - | 372 | WP_000413439.1 | VOC family protein | - |
| NW971_RS07955 (NW971_07955) | 1623841..1625247 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|