MGE detailed information
MGE type: Genomic_island MGE length: 24036 bp
Accession: NZ_CP102951 Location: 3154440..3178475 Organism: Pseudomonas sp. LS1212 Replicon: chromosome
Accession: NZ_CP102951 Location: 3154440..3178475 Organism: Pseudomonas sp. LS1212 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NVV94_RS14665 (NVV94_14665) | 3150476..3150958 | - | 483 | WP_258443120.1 | lytic transglycosylase domain-containing protein | - |
| NVV94_RS14670 (NVV94_14670) | 3151024..3151962 | - | 939 | WP_258443121.1 | site-specific integrase | - |
| NVV94_RS14675 (NVV94_14675) | 3152138..3153139 | + | 1002 | WP_258443122.1 | DNA-binding protein | - |
| NVV94_RS14680 (NVV94_14680) | 3153178..3153399 | + | 222 | WP_258443123.1 | BPSL0761 family protein | - |
| NVV94_RS14685 (NVV94_14685) | 3153450..3153836 | - | 387 | WP_258443124.1 | DUF2384 domain-containing protein | - |
| NVV94_RS14690 (NVV94_14690) | 3153900..3154209 | - | 310 | Protein_2880 | hypothetical protein | - |
| NVV94_RS14695 (NVV94_14695) | 3154440..3154976 | - | 537 | WP_258443125.1 | reverse transcriptase N-terminal domain-containing protein | - |
| NVV94_RS14700 (NVV94_14700) | 3156401..3159523 | - | 3123 | WP_258443126.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| NVV94_RS14705 (NVV94_14705) | 3159535..3159876 | - | 342 | WP_258443127.1 | P-II family nitrogen regulator | - |
| NVV94_RS14710 (NVV94_14710) | 3159891..3161549 | - | 1659 | WP_258443128.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NVV94_RS14715 (NVV94_14715) | 3161591..3162823 | - | 1233 | WP_258443129.1 | TolC family protein | - |
| NVV94_RS14720 (NVV94_14720) | 3163285..3163956 | + | 672 | WP_258443131.1 | Transcriptional activator protein CzcR | VF |
| NVV94_RS14725 (NVV94_14725) | 3163956..3165350 | + | 1395 | WP_258443132.1 | Sensor protein CzcS | VF |
| NVV94_RS14730 (NVV94_14730) | 3165588..3166913 | - | 1326 | WP_258443133.1 | OprD family porin | - |
| NVV94_RS14735 (NVV94_14735) | 3167446..3167667 | - | 222 | WP_258443134.1 | hypothetical protein | - |
| NVV94_RS14740 (NVV94_14740) | 3167881..3169206 | - | 1326 | WP_258443135.1 | OprD family porin | - |
| NVV94_RS14745 (NVV94_14745) | 3169634..3171148 | + | 1515 | WP_258443136.1 | IS21 family transposase ISPre4 | Transposase |
| NVV94_RS14750 (NVV94_14750) | 3171166..3171921 | + | 756 | WP_258443137.1 | IS21 family transposase ISPsy41 | Transposase |
| NVV94_RS14755 (NVV94_14755) | 3172309..3172564 | - | 256 | Protein_2893 | hypothetical protein | - |
| NVV94_RS14760 (NVV94_14760) | 3172605..3172898 | - | 294 | WP_258443138.1 | hypothetical protein | - |
| NVV94_RS14765 (NVV94_14765) | 3172921..3173322 | - | 402 | WP_258443140.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| NVV94_RS14770 (NVV94_14770) | 3173325..3173621 | - | 297 | WP_258443141.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| NVV94_RS14775 (NVV94_14775) | 3173813..3174262 | + | 450 | WP_258443142.1 | VOC family protein | - |
| NVV94_RS14780 (NVV94_14780) | 3174609..3176093 | - | 1485 | WP_258443143.1 | group II intron reverse transcriptase/maturase | - |
| NVV94_RS14785 (NVV94_14785) | 3176720..3177270 | - | 551 | Protein_2899 | OprD family porin | - |
| NVV94_RS14790 (NVV94_14790) | 3177443..3177724 | - | 282 | WP_258447711.1 | DUF2790 domain-containing protein | - |
| NVV94_RS14795 (NVV94_14795) | 3178002..3178274 | - | 273 | WP_258443144.1 | hypothetical protein | - |
| NVV94_RS14800 (NVV94_14800) | 3178275..3178475 | - | 201 | WP_258443145.1 | hypothetical protein | - |
| NVV94_RS14805 (NVV94_14805) | 3178472..3178906 | - | 435 | WP_258443146.1 | hypothetical protein | - |
| NVV94_RS14810 (NVV94_14810) | 3179034..3179384 | - | 351 | WP_258443147.1 | copper-binding protein | - |
| NVV94_RS14815 (NVV94_14815) | 3179381..3182539 | - | 3159 | WP_258443149.1 | efflux RND transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|