MGE detailed information
MGE type: Genomic_island MGE length: 67452 bp
Accession: NZ_CP102947 Location: 802555..870006 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: chromosome
Accession: NZ_CP102947 Location: 802555..870006 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW339_RS03905 (798314) | 798314..799492 | + | 1179 | WP_032152727.1 | type II secretion system protein GspL | - |
| NW339_RS03910 (799494) | 799494..800030 | + | 537 | WP_032152726.1 | GspM family type II secretion system protein YghD | - |
| NW339_RS03915 (801092) | 801092..801868 | + | 777 | WP_000124291.1 | ABC transporter permease | - |
| NW339_RS03920 (801865) | 801865..802533 | + | 669 | WP_001604847.1 | ABC transporter ATP-binding protein | - |
| NW339_RS03925 (802555) | 802555..803573 | + | 1019 | Protein_771 | UDP-glucose 4-epimerase | VF |
| NW339_RS03930 (803665) | 803665..804702 | + | 1038 | WP_258390136.1 | hypothetical protein | - |
| NW339_RS03935 (804708) | 804708..805946 | + | 1239 | WP_258390137.1 | hypothetical protein | - |
| NW339_RS03940 (805943) | 805943..806572 | + | 630 | WP_021521026.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| NW339_RS03945 (807064) | 807064..808311 | - | 1248 | WP_032152724.1 | hypothetical protein | VF |
| NW339_RS03950 (808346) | 808346..810373 | - | 2028 | WP_072649095.1 | hypothetical protein | VF |
| NW339_RS03955 (810370) | 810370..811110 | - | 741 | WP_163436372.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| NW339_RS03960 (811120) | 811120..812796 | - | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| NW339_RS03965 (812820) | 812820..813968 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| NW339_RS03970 (814040) | 814040..815023 | - | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| NW339_RS03975 (815834) | 815834..816004 | - | 171 | Protein_781 | IS110 family transposase ISEc32 | Transposase |
| NW339_RS03980 (816421) | 816421..817354 | - | 934 | Protein_782 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NW339_RS03985 (817347) | 817347..817742 | - | 396 | WP_000208384.1 | DUF6088 family protein | - |
| NW339_RS03990 (817811) | 817811..818656 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| NW339_RS03995 (818741) | 818741..818938 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| NW339_RS04000 (818955) | 818955..819443 | - | 489 | WP_000761699.1 | DUF5983 family protein | - |
| NW339_RS04005 (819440) | 819440..819817 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| NW339_RS04010 (819906) | 819906..820274 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NW339_RS04015 (820324) | 820324..820968 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| NW339_RS04020 (820987) | 820987..821208 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| NW339_RS04025 (821271) | 821271..821747 | - | 477 | WP_001186726.1 | RadC family protein | - |
| NW339_RS04030 (821763) | 821763..822248 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| NW339_RS04035 (822303) | 822303..823121 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| NW339_RS04040 (823222) | 823222..823455 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| NW339_RS04045 (823534) | 823534..823989 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| NW339_RS04050 (824065) | 824065..825192 | - | 1128 | Protein_796 | hypothetical protein | - |
| NW339_RS04055 (825287) | 825287..828409 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| NW339_RS04060 (828743) | 828743..829615 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| NW339_RS04065 (830947) | 830947..832437 | + | 1491 | WP_001305029.1 | YfjI family protein | - |
| NW339_RS04070 (832558) | 832558..833130 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| NW339_RS04075 (833216) | 833216..833422 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| NW339_RS04080 (834340) | 834340..834519 | + | 180 | Protein_802 | hemolysin expression modulator Hha | - |
| NW339_RS04085 (834852) | 834852..835049 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| NW339_RS04090 (835248) | 835248..835817 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| NW339_RS04095 (836135) | 836135..837262 | + | 1128 | WP_258390105.1 | IS110 family transposase ISSso6 | Transposase |
| NW339_RS04100 (837555) | 837555..839168 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS04105 (839199) | 839199..839549 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS04110 (839546) | 839546..839971 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS04115 (840086) | 840086..840427 | + | 342 | WP_042012683.1 | putative zinc ribbon protein | - |
| NW339_RS04120 (840424) | 840424..840609 | + | 186 | Protein_810 | zinc-ribbon domain-containing protein | - |
| NW339_RS04125 (840648) | 840648..842186 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| NW339_RS04130 (842186) | 842186..843283 | - | 1098 | Protein_812 | IS66 family transposase IS682 | Transposase |
| NW339_RS04135 (843314) | 843314..843664 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| NW339_RS04140 (843661) | 843661..844086 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| NW339_RS04145 (844232) | 844232..844629 | - | 398 | Protein_815 | transposase domain-containing protein | - |
| NW339_RS04150 (844747) | 844747..845664 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| NW339_RS04155 (845698) | 845698..846573 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| NW339_RS04160 (846622) | 846622..848094 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| NW339_RS04165 (848098) | 848098..848928 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| NW339_RS04170 (848974) | 848974..849684 | + | 711 | WP_001296386.1 | oligogalacturonate-specific porin KdgM family protein | - |
| NW339_RS04175 (849697) | 849697..850806 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| NW339_RS04180 (850868) | 850868..851791 | + | 924 | WP_001030790.1 | alpha/beta hydrolase | - |
| NW339_RS04185 (851827) | 851827..852561 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| NW339_RS04190 (852661) | 852661..853647 | + | 987 | WP_000274668.1 | sialate O-acetylesterase | - |
| NW339_RS04195 (853799) | 853799..855027 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| NW339_RS04200 (855527) | 855527..857617 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| NW339_RS04205 (857835) | 857835..857994 | - | 160 | Protein_827 | transposase domain-containing protein | - |
| NW339_RS04210 (858479) | 858479..858721 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| NW339_RS04215 (859012) | 859012..859371 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| NW339_RS04220 (859375) | 859375..859590 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| NW339_RS04225 (860168) | 860168..860490 | - | 323 | Protein_831 | transposase | - |
| NW339_RS04230 (860510) | 860510..861019 | + | 510 | Protein_832 | L-lactate permease | - |
| NW339_RS04235 (861053) | 861053..862585 | - | 1533 | Protein_833 | IS3 family transposase | - |
| NW339_RS04240 (863001) | 863001..863450 | - | 450 | WP_225469291.1 | hypothetical protein | - |
| NW339_RS04245 (863468) | 863468..864295 | - | 828 | WP_257721408.1 | IS3 family transposase ISSd1 | Transposase |
| NW339_RS04250 (864371) | 864371..865522 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| NW339_RS04255 (865519) | 865519..865605 | - | 87 | Protein_837 | IS3 family transposase ISSfl10 | Transposase |
| NW339_RS04260 (865587) | 865587..865847 | - | 261 | Protein_838 | IS3 family transposase ISSfl10 | Transposase |
| NW339_RS04265 (866119) | 866119..870006 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| NW339_RS04270 (870256) | 870256..870399 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| NW339_RS04275 (870950) | 870950..873151 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| NW339_RS04280 (873177) | 873177..874510 | - | 1334 | Protein_842 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|