MGE detailed information
MGE type: Genomic_island MGE length: 44357 bp
Accession: NZ_CP102947 Location: 3759474..3803830 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: chromosome
Accession: NZ_CP102947 Location: 3759474..3803830 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW339_RS18510 (3754691) | 3754691..3754966 | - | 276 | WP_000691951.1 | DUF1471 family periplasmic protein YahO | - |
| NW339_RS18515 (3755113) | 3755113..3755784 | + | 672 | WP_000976972.1 | LysE family transporter | - |
| NW339_RS18520 (3755801) | 3755801..3756045 | - | 245 | Protein_3633 | hypothetical protein | - |
| NW339_RS18530 (3757368) | 3757368..3759290 | + | 1923 | Protein_3635 | outer membrane autotransporter HyxB | - |
| NW339_RS18535 (3759474) | 3759474..3760142 | + | 669 | WP_001005267.1 | protein YkgH | - |
| NW339_RS18540 (3760385) | 3760385..3761080 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| NW339_RS18545 (3761073) | 3761073..3762500 | - | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NW339_RS18550 (3762511) | 3762511..3763230 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| NW339_RS18560 (3764530) | 3764530..3765384 | - | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NW339_RS18565 (3765611) | 3765611..3766936 | + | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NW339_RS18570 (3767045) | 3767045..3767281 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NW339_RS18575 (3767293) | 3767293..3767886 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| NW339_RS18580 (3768046) | 3768046..3768915 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| NW339_RS18585 (3769163) | 3769163..3770020 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| NW339_RS18590 (3770145) | 3770145..3774392 | - | 4248 | WP_000092552.1 | hypothetical protein | VF |
| NW339_RS18595 (3774958) | 3774958..3775809 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| NW339_RS18600 (3775836) | 3775836..3776825 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| NW339_RS18605 (3776856) | 3776856..3777749 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| NW339_RS18610 (3778005) | 3778005..3778702 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| NW339_RS18615 (3778725) | 3778725..3779651 | - | 927 | WP_258390093.1 | HTH-type transcriptional regulator PgrR | VF |
| NW339_RS18620 (3779808) | 3779808..3780728 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| NW339_RS18625 (3780901) | 3780901..3782043 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| NW339_RS18630 (3782516) | 3782516..3782617 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| NW339_RS18635 (3782982) | 3782982..3783245 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NW339_RS18640 (3783245) | 3783245..3783385 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NW339_RS18645 (3783455) | 3783455..3783645 | - | 191 | Protein_3658 | hypothetical protein | - |
| NW339_RS18650 (3784469) | 3784469..3785011 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| NW339_RS18655 (3785086) | 3785086..3785673 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NW339_RS18660 (3785730) | 3785730..3786398 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| NW339_RS18665 (3786424) | 3786424..3788949 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| NW339_RS18670 (3788939) | 3788939..3790582 | + | 1644 | WP_021520542.1 | Fimbria adhesin EcpD | VF |
| NW339_RS18675 (3790551) | 3790551..3791261 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| NW339_RS18680 (3791568) | 3791568..3791897 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| NW339_RS18685 (3791909) | 3791909..3792075 | - | 167 | Protein_3666 | tail fiber assembly protein | - |
| NW339_RS18690 (3792146) | 3792146..3792760 | - | 615 | WP_001019923.1 | YagU family protein | - |
| NW339_RS18695 (3792975) | 3792975..3793160 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| NW339_RS18700 (3793209) | 3793209..3793367 | + | 159 | Protein_3669 | integrase | - |
| NW339_RS18705 (3793594) | 3793594..3793929 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| NW339_RS18710 (3794137) | 3794137..3794913 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| NW339_RS18715 (3795078) | 3795078..3795998 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NW339_RS18720 (3795985) | 3795985..3796767 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NW339_RS18725 (3797051) | 3797051..3800149 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| NW339_RS18730 (3800143) | 3800143..3801780 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| NW339_RS18735 (3801770) | 3801770..3803017 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| NW339_RS18740 (3803224) | 3803224..3803382 | + | 159 | WP_071550417.1 | ash family protein | - |
| NW339_RS18745 (3803360) | 3803360..3803830 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| NW339_RS18750 (3803976) | 3803976..3804179 | + | 204 | Protein_3679 | integrase | - |
| NW339_RS18760 (3804384) | 3804384..3805637 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NW339_RS18765 (3805649) | 3805649..3806752 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NW339_RS18770 (3807041) | 3807041..3808096 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| NW339_RS18775 (3808135) | 3808135..3808536 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|