MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 102829 bp
Accession: NZ_CP102946 Location: 5226330..5329158 Organism: Pseudomonas aeruginosa strain SCAID WND1-2022 (148) Replicon: chromosome
Accession: NZ_CP102946 Location: 5226330..5329158 Organism: Pseudomonas aeruginosa strain SCAID WND1-2022 (148) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW341_RS24235 (NW341_24235) | 5221956..5226101 | + | 4146 | WP_019681376.1 | two-partner secretion system exoprotein TpsA4 | - |
| NW341_RS24240 (NW341_24240) | 5226467..5227327 | + | 861 | WP_003158180.1 | ParA family protein | - |
| NW341_RS24245 (NW341_24245) | 5227329..5228054 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| NW341_RS24250 (NW341_24250) | 5228051..5228548 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| NW341_RS24255 (NW341_24255) | 5228554..5229300 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| NW341_RS24260 (NW341_24260) | 5229297..5229983 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| NW341_RS24265 (NW341_24265) | 5229983..5230684 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| NW341_RS24270 (NW341_24270) | 5230681..5231388 | + | 708 | WP_003103848.1 | HNH endonuclease signature motif containing protein | - |
| NW341_RS24275 (NW341_24275) | 5231372..5231590 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| NW341_RS24280 (NW341_24280) | 5231587..5232930 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| NW341_RS24285 (NW341_24285) | 5233369..5233815 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| NW341_RS24290 (NW341_24290) | 5233993..5234178 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| NW341_RS24295 (NW341_24295) | 5234168..5234695 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| NW341_RS24300 (NW341_24300) | 5234692..5234949 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| NW341_RS24305 (NW341_24305) | 5234942..5235439 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| NW341_RS24310 (NW341_24310) | 5235432..5235665 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| NW341_RS24315 (NW341_24315) | 5235665..5236681 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| NW341_RS24320 (NW341_24320) | 5236684..5236932 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| NW341_RS24325 (NW341_24325) | 5236929..5238662 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| NW341_RS24330 (NW341_24330) | 5238690..5239445 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| NW341_RS24335 (NW341_24335) | 5239448..5240773 | + | 1326 | WP_071534719.1 | STY4528 family pathogenicity island replication protein | - |
| NW341_RS24340 (NW341_24340) | 5241770..5241940 | + | 171 | WP_003159716.1 | hypothetical protein | - |
| NW341_RS24345 (NW341_24345) | 5242096..5242824 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| NW341_RS24350 (NW341_24350) | 5242830..5243378 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| NW341_RS24355 (NW341_24355) | 5243425..5244264 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| NW341_RS24360 (NW341_24360) | 5244294..5244782 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| NW341_RS24365 (NW341_24365) | 5244938..5245135 | + | 198 | WP_003109353.1 | CrpP family ICE-associated protein | - |
| NW341_RS24370 (NW341_24370) | 5245201..5245419 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| NW341_RS24375 (NW341_24375) | 5245619..5245879 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| NW341_RS24380 (NW341_24380) | 5245901..5246311 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NW341_RS24385 (NW341_24385) | 5246311..5246541 | - | 231 | WP_003158175.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NW341_RS24390 (NW341_24390) | 5246797..5248716 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| NW341_RS24395 (NW341_24395) | 5249024..5249233 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| NW341_RS24400 (NW341_24400) | 5249454..5251343 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| NW341_RS24405 (NW341_24405) | 5251340..5253313 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| NW341_RS24410 (NW341_24410) | 5253435..5254217 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| NW341_RS24415 (NW341_24415) | 5254250..5255503 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| NW341_RS24420 (NW341_24420) | 5255677..5256801 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| NW341_RS24425 (NW341_24425) | 5256801..5258510 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| NW341_RS24430 (NW341_24430) | 5258514..5259839 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| NW341_RS24435 (NW341_24435) | 5259829..5260362 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| NW341_RS24440 (NW341_24440) | 5260371..5261951 | + | 1581 | WP_015060168.1 | hypothetical protein | VF |
| NW341_RS24445 (NW341_24445) | 5261951..5263030 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NW341_RS24450 (NW341_24450) | 5263052..5263582 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| NW341_RS24455 (NW341_24455) | 5263579..5264520 | + | 942 | WP_003109361.1 | ATPase, T2SS/T4P/T4SS family | - |
| NW341_RS24460 (NW341_24460) | 5264525..5265853 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| NW341_RS24465 (NW341_24465) | 5265882..5266319 | + | 438 | WP_003109363.1 | hypothetical protein | VF |
| NW341_RS24470 (NW341_24470) | 5267241..5267630 | + | 390 | WP_003109365.1 | hypothetical protein | - |
| NW341_RS24475 (NW341_24475) | 5267703..5267882 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| NW341_RS24480 (NW341_24480) | 5267884..5268018 | + | 135 | WP_003109366.1 | hypothetical protein | - |
| NW341_RS24485 (NW341_24485) | 5268342..5268821 | + | 480 | WP_003109367.1 | STY4534 family ICE replication protein | - |
| NW341_RS24490 (NW341_24490) | 5268959..5269117 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| NW341_RS24495 (NW341_24495) | 5269191..5269388 | + | 198 | WP_003109369.1 | hypothetical protein | - |
| NW341_RS24500 (NW341_24500) | 5269874..5270581 | + | 708 | WP_003456317.1 | hypothetical protein | - |
| NW341_RS24505 (NW341_24505) | 5270817..5271167 | + | 351 | WP_003109371.1 | hypothetical protein | - |
| NW341_RS24510 (NW341_24510) | 5271224..5271835 | + | 612 | Protein_4846 | DUF3275 family protein | - |
| NW341_RS24515 (NW341_24515) | 5272118..5272480 | + | 363 | WP_003159706.1 | hypothetical protein | - |
| NW341_RS24520 (NW341_24520) | 5272548..5272802 | + | 255 | WP_003125295.1 | hypothetical protein | - |
| NW341_RS24525 (NW341_24525) | 5272894..5273499 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| NW341_RS24530 (NW341_24530) | 5273529..5274878 | + | 1350 | WP_258383228.1 | class I SAM-dependent methyltransferase | - |
| NW341_RS24535 (NW341_24535) | 5274901..5275257 | - | 357 | Protein_4851 | alkene reductase | - |
| NW341_RS24540 (NW341_24540) | 5275299..5275853 | - | 555 | WP_003125306.1 | OsmC family protein | - |
| NW341_RS24545 (NW341_24545) | 5275921..5276592 | - | 672 | WP_016561615.1 | DsbA family oxidoreductase | - |
| NW341_RS24550 (NW341_24550) | 5276645..5276986 | - | 342 | WP_003125308.1 | carboxymuconolactone decarboxylase family protein | - |
| NW341_RS24555 (NW341_24555) | 5277081..5277641 | - | 561 | WP_015060170.1 | TetR/AcrR family transcriptional regulator | - |
| NW341_RS24560 (NW341_24560) | 5277704..5278489 | - | 786 | WP_003125309.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| NW341_RS24565 (NW341_24565) | 5278645..5279058 | - | 414 | WP_015060171.1 | hypothetical protein | - |
| NW341_RS24570 (NW341_24570) | 5279192..5280354 | + | 1163 | WP_121412922.1 | IS3 family transposase IS222 | Transposase |
| NW341_RS24575 (NW341_24575) | 5280329..5281141 | - | 813 | WP_016561613.1 | hypothetical protein ; Integrase | Integrase |
| NW341_RS24580 (NW341_24580) | 5281422..5281694 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| NW341_RS24585 (NW341_24585) | 5281912..5282604 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| NW341_RS24590 (NW341_24590) | 5282615..5283370 | + | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| NW341_RS24595 (NW341_24595) | 5283355..5283936 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| NW341_RS24600 (NW341_24600) | 5283933..5284433 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| NW341_RS24605 (NW341_24605) | 5284442..5284711 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| NW341_RS24610 (NW341_24610) | 5284715..5286946 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| NW341_RS24615 (NW341_24615) | 5286946..5287692 | + | 747 | WP_003159693.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| NW341_RS24620 (NW341_24620) | 5287703..5289184 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| NW341_RS24625 (NW341_24625) | 5289316..5290425 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| NW341_RS24630 (NW341_24630) | 5290470..5290736 | - | 267 | WP_223703940.1 | DUF2845 domain-containing protein | - |
| NW341_RS24635 (NW341_24635) | 5290954..5291253 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| NW341_RS24640 (NW341_24640) | 5291347..5291685 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| NW341_RS24645 (NW341_24645) | 5291682..5291921 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| NW341_RS24650 (NW341_24650) | 5291939..5292295 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| NW341_RS24655 (NW341_24655) | 5292306..5292692 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| NW341_RS24660 (NW341_24660) | 5292689..5293348 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| NW341_RS24665 (NW341_24665) | 5293345..5294229 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| NW341_RS24670 (NW341_24670) | 5294213..5295718 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| NW341_RS24675 (NW341_24675) | 5295696..5296139 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| NW341_RS24680 (NW341_24680) | 5296277..5299081 | + | 2805 | WP_226342062.1 | conjugative transfer ATPase | - |
| NW341_RS24685 (NW341_24685) | 5299078..5299362 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| NW341_RS24690 (NW341_24690) | 5299359..5300015 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| NW341_RS24695 (NW341_24695) | 5300012..5300230 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| NW341_RS24700 (NW341_24700) | 5300789..5301976 | + | 1188 | WP_003159689.1 | FAD/NAD(P)-binding oxidoreductase | - |
| NW341_RS24705 (NW341_24705) | 5301999..5302421 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| NW341_RS24710 (NW341_24710) | 5302411..5303277 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| NW341_RS24715 (NW341_24715) | 5303415..5303846 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| NW341_RS24720 (NW341_24720) | 5303846..5304784 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| NW341_RS24725 (NW341_24725) | 5304802..5306184 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| NW341_RS24730 (NW341_24730) | 5306184..5306531 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| NW341_RS24735 (NW341_24735) | 5306528..5308063 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NW341_RS24740 (NW341_24740) | 5308093..5308446 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| NW341_RS24745 (NW341_24745) | 5308565..5308837 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NW341_RS24750 (NW341_24750) | 5308841..5309191 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NW341_RS24755 (NW341_24755) | 5309569..5318082 | - | 8514 | WP_016561608.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| NW341_RS24760 (NW341_24760) | 5318647..5318910 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| NW341_RS24765 (NW341_24765) | 5318924..5319148 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| NW341_RS24770 (NW341_24770) | 5319354..5320082 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| NW341_RS24775 (NW341_24775) | 5320153..5320515 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| NW341_RS24780 (NW341_24780) | 5320619..5321113 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| NW341_RS24785 (NW341_24785) | 5321222..5323240 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| NW341_RS24790 (NW341_24790) | 5323396..5324589 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| NW341_RS24795 (NW341_24795) | 5324977..5325333 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| NW341_RS24800 (NW341_24800) | 5325394..5325546 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| NW341_RS24805 (NW341_24805) | 5325545..5327464 | + | 1920 | WP_003158138.1 | MobH family relaxase | - |
| NW341_RS24810 (NW341_24810) | 5327461..5328744 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NW341_RS24830 (NW341_24830) | 5329596..5332160 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| NW341_RS24835 (NW341_24835) | 5332316..5333044 | - | 729 | WP_014603307.1 | peptidoglycan editing factor PgeF | - |
| NW341_RS24840 (NW341_24840) | 5333041..5334003 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|