MGE detailed information
MGE type: Conjugative plasmid MGE length: 130974 bp
Accession: NZ_CP102834 Location: 1..130974 Organism: Klebsiella pneumoniae strain KP4962 Replicon: plasmid pKP4962-1
Accession: NZ_CP102834 Location: 1..130974 Organism: Klebsiella pneumoniae strain KP4962 Replicon: plasmid pKP4962-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV394_RS26530 (NV394_26530) | 276..848 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| NV394_RS26535 (NV394_26535) | 985..1530 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| NV394_RS26540 (NV394_26540) | 1668..2201 | + | 534 | Protein_3 | DUF4113 domain-containing protein | - |
| NV394_RS26545 (NV394_26545) | 2348..2629 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| NV394_RS26550 (NV394_26550) | 2610..2939 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NV394_RS26555 (NV394_26555) | 3175..3432 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| NV394_RS26560 (NV394_26560) | 3466..4170 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NV394_RS26565 (NV394_26565) | 4207..4746 | - | 540 | WP_124743167.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NV394_RS26570 (NV394_26570) | 4910..6982 | + | 2073 | Protein_9 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NV394_RS26575 (NV394_26575) | 7034..7738 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NV394_RS26580 (NV394_26580) | 7926..8234 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| NV394_RS26585 (NV394_26585) | 8231..8881 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| NV394_RS26590 (NV394_26590) | 8937..9581 | - | 645 | WP_014343481.1 | hypothetical protein | - |
| NV394_RS26595 (NV394_26595) | 9631..10233 | - | 603 | WP_013023836.1 | PIN domain-containing protein | - |
| NV394_RS26600 (NV394_26600) | 10394..10987 | - | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| NV394_RS26605 (NV394_26605) | 11059..11784 | - | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NV394_RS26610 (NV394_26610) | 11865..17126 | - | 5262 | WP_258291262.1 | Multifunctional conjugation protein TraI | Relaxase |
| NV394_RS26615 (NV394_26615) | 17126..19438 | - | 2313 | WP_013023832.1 | type IV conjugative transfer system coupling protein TraD | - |
| NV394_RS26620 (NV394_26620) | 19565..20254 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| NV394_RS26625 (NV394_26625) | 20447..21178 | - | 732 | WP_013023830.1 | conjugal transfer complement resistance protein TraT | - |
| NV394_RS26630 (NV394_26630) | 21364..21897 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| NV394_RS26635 (NV394_26635) | 21900..24749 | - | 2850 | WP_013609534.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NV394_RS26640 (NV394_26640) | 24749..26128 | - | 1380 | WP_014343487.1 | conjugal transfer pilus assembly protein TraH | - |
| NV394_RS26645 (NV394_26645) | 26106..26549 | - | 444 | WP_013023828.1 | F-type conjugal transfer protein TrbF | - |
| NV394_RS26650 (NV394_26650) | 26595..27152 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NV394_RS26655 (NV394_26655) | 27124..27363 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NV394_RS26660 (NV394_26660) | 27374..28126 | - | 753 | WP_048337413.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NV394_RS26665 (NV394_26665) | 28147..28473 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| NV394_RS26670 (NV394_26670) | 28486..28734 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| NV394_RS26675 (NV394_26675) | 28712..28966 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NV394_RS26680 (NV394_26680) | 28998..30953 | - | 1956 | WP_013023827.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NV394_RS26685 (NV394_26685) | 31012..31650 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NV394_RS26690 (NV394_26690) | 31663..32652 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| NV394_RS26695 (NV394_26695) | 32649..33038 | - | 390 | WP_004194992.1 | hypothetical protein | - |
| NV394_RS26700 (NV394_26700) | 33080..33706 | - | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| NV394_RS26705 (NV394_26705) | 33706..34095 | - | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| NV394_RS26710 (NV394_26710) | 34095..36734 | - | 2640 | WP_013023824.1 | type IV secretion system protein TraC | - |
| NV394_RS26715 (NV394_26715) | 36806..37204 | - | 399 | WP_013609531.1 | hypothetical protein | - |
| NV394_RS26720 (NV394_26720) | 37580..37984 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| NV394_RS26725 (NV394_26725) | 38051..38362 | - | 312 | WP_015344986.1 | hypothetical protein | - |
| NV394_RS26730 (NV394_26730) | 38363..38581 | - | 219 | WP_015344987.1 | hypothetical protein | - |
| NV394_RS26735 (NV394_26735) | 38687..39097 | - | 411 | WP_009309869.1 | hypothetical protein | - |
| NV394_RS26740 (NV394_26740) | 39229..39813 | - | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NV394_RS26745 (NV394_26745) | 39927..41351 | - | 1425 | WP_004194260.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NV394_RS26750 (NV394_26750) | 41351..42091 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| NV394_RS26755 (NV394_26755) | 42078..42644 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NV394_RS26760 (NV394_26760) | 42664..42969 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NV394_RS26765 (NV394_26765) | 42983..43351 | - | 369 | WP_243206609.1 | type IV conjugative transfer system pilin TraA | - |
| NV394_RS26770 (NV394_26770) | 43420..43620 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| NV394_RS26775 (NV394_26775) | 43706..44407 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| NV394_RS26780 (NV394_26780) | 44637..45029 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NV394_RS26785 (NV394_26785) | 45461..45946 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| NV394_RS26790 (NV394_26790) | 45979..46308 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| NV394_RS26795 (NV394_26795) | 46341..47162 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NV394_RS26800 (NV394_26800) | 47970..49178 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| NV394_RS26805 (NV394_26805) | 49314..49727 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| NV394_RS26810 (NV394_26810) | 49728..50006 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| NV394_RS26815 (NV394_26815) | 49996..50316 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NV394_RS26820 (NV394_26820) | 50397..50621 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| NV394_RS26825 (NV394_26825) | 50632..50844 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| NV394_RS26830 (NV394_26830) | 50905..51261 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| NV394_RS26835 (NV394_26835) | 52103..52420 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| NV394_RS26840 (NV394_26840) | 52435..52785 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| NV394_RS26845 (NV394_26845) | 52782..53054 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| NV394_RS26850 (NV394_26850) | 53747..53863 | - | 117 | WP_055313929.1 | type I toxin-antitoxin system Hok family toxin | - |
| NV394_RS26855 (NV394_26855) | 53814..53963 | - | 150 | Protein_66 | FlmC family protein | - |
| NV394_RS26860 (NV394_26860) | 54133..54507 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| NV394_RS26865 (NV394_26865) | 54563..54889 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| NV394_RS26870 (NV394_26870) | 54886..55614 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| NV394_RS26875 (NV394_26875) | 55611..56042 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| NV394_RS26880 (NV394_26880) | 56087..58144 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| NV394_RS26885 (NV394_26885) | 58214..58462 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| NV394_RS26890 (NV394_26890) | 58511..59053 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| NV394_RS26895 (NV394_26895) | 59885..60448 | - | 564 | WP_004152756.1 | methyltransferase | - |
| NV394_RS26900 (NV394_26900) | 60496..61851 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| NV394_RS26905 (NV394_26905) | 61903..62133 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NV394_RS26910 (NV394_26910) | 62225..62452 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| NV394_RS26915 (NV394_26915) | 63132..63452 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| NV394_RS26920 (NV394_26920) | 63487..63741 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| NV394_RS26925 (NV394_26925) | 63929..64120 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| NV394_RS26930 (NV394_26930) | 64163..64669 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| NV394_RS26935 (NV394_26935) | 64712..65140 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| NV394_RS26940 (NV394_26940) | 65821..66588 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| NV394_RS26945 (NV394_26945) | 66642..67061 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NV394_RS26950 (NV394_26950) | 67071..67292 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NV394_RS26955 (NV394_26955) | 67292..67993 | - | 702 | WP_001568041.1 | DNA methylase | - |
| NV394_RS26960 (NV394_26960) | 68065..68234 | - | 170 | Protein_87 | hypothetical protein | - |
| NV394_RS26965 (NV394_26965) | 68430..68660 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| NV394_RS26970 (NV394_26970) | 68724..69395 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| NV394_RS26975 (NV394_26975) | 69398..70369 | - | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| NV394_RS26980 (NV394_26980) | 70618..72105 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| NV394_RS26985 (NV394_26985) | 72512..72943 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NV394_RS26990 (NV394_26990) | 72943..74214 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| NV394_RS26995 (NV394_26995) | 74626..75501 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| NV394_RS27000 (NV394_27000) | 76174..76800 | + | 627 | WP_004197649.1 | hypothetical protein | VF |
| NV394_RS27005 (NV394_27005) | 76797..77099 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| NV394_RS27010 (NV394_27010) | 77539..78333 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| NV394_RS27015 (NV394_27015) | 78531..79547 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| NV394_RS27020 (NV394_27020) | 79558..79872 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| NV394_RS27025 (NV394_27025) | 79899..80294 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| NV394_RS27030 (NV394_27030) | 80463..80768 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NV394_RS27035 (NV394_27035) | 80770..80988 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NV394_RS27040 (NV394_27040) | 81806..82096 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| NV394_RS27045 (NV394_27045) | 82093..83220 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| NV394_RS27050 (NV394_27050) | 83254..84846 | - | 1593 | WP_015344964.1 | hypothetical protein | - |
| NV394_RS27055 (NV394_27055) | 85053..85832 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| NV394_RS27060 (NV394_27060) | 85845..86345 | - | 501 | WP_013023779.1 | HEPN family nuclease | - |
| NV394_RS27065 (NV394_27065) | 86620..86883 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| NV394_RS27070 (NV394_27070) | 86880..87446 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| NV394_RS27075 (NV394_27075) | 87477..87971 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| NV394_RS27080 (NV394_27080) | 88015..88383 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| NV394_RS27085 (NV394_27085) | 88417..88620 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| NV394_RS27090 (NV394_27090) | 88669..88926 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| NV394_RS27095 (NV394_27095) | 89002..89256 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| NV394_RS27100 (NV394_27100) | 89392..90168 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| NV394_RS27105 (NV394_27105) | 90409..90732 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| NV394_RS27110 (NV394_27110) | 90911..91180 | - | 270 | Protein_117 | SOS response-associated peptidase family protein | - |
| NV394_RS27115 (NV394_27115) | 91316..91483 | + | 168 | Protein_118 | IS5 family transposase IS903 | Transposase |
| NV394_RS27120 (NV394_27120) | 91539..91688 | + | 150 | Protein_119 | IS110 family transposase | - |
| NV394_RS27125 (NV394_27125) | 91971..93152 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| NV394_RS27130 (NV394_27130) | 94344..95201 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| NV394_RS27135 (NV394_27135) | 95214..95388 | - | 175 | Protein_122 | protein CopA/IncA | - |
| NV394_RS27140 (NV394_27140) | 95503..95772 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| NV394_RS27145 (NV394_27145) | 95890..96399 | - | 510 | WP_052145515.1 | Phospholipase D | VF |
| NV394_RS27150 (NV394_27150) | 96950..98491 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| NV394_RS27155 (NV394_27155) | 98896..99735 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| NV394_RS27160 (NV394_27160) | 99729..100076 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| NV394_RS27165 (NV394_27165) | 100193..101038 | - | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| NV394_RS27170 (NV394_27170) | 101219..101692 | - | 474 | WP_001749985.1 | IS1595 family transposase ISSsu9 | ARG |
| NV394_RS27175 (NV394_27175) | 101825..102277 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| NV394_RS27180 (NV394_27180) | 102374..102928 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| NV394_RS27185 (NV394_27185) | 103220..104233 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NV394_RS27190 (NV394_27190) | 104704..105408 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NV394_RS27195 (NV394_27195) | 105473..105727 | + | 255 | Protein_134 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NV394_RS27200 (NV394_27200) | 105785..106027 | + | 243 | WP_000844627.1 | transposase | - |
| NV394_RS27205 (NV394_27205) | 106059..106709 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NV394_RS27210 (NV394_27210) | 106815..108014 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| NV394_RS27215 (NV394_27215) | 107981..108169 | - | 189 | Protein_138 | IS91 family transposase | - |
| NV394_RS27220 (NV394_27220) | 108281..108586 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| NV394_RS27225 (NV394_27225) | 108614..109828 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| NV394_RS27230 (NV394_27230) | 110045..110680 | - | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| NV394_RS27235 (NV394_27235) | 110775..111722 | - | 948 | Protein_142 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NV394_RS27240 (NV394_27240) | 111780..112484 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NV394_RS27245 (NV394_27245) | 112772..113632 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NV394_RS27250 (NV394_27250) | 113892..114368 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| NV394_RS27255 (NV394_27255) | 114415..115290 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| NV394_RS27260 (NV394_27260) | 115625..115819 | - | 195 | Protein_147 | IS1380 family transposase | - |
| NV394_RS27265 (NV394_27265) | 115876..116573 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| NV394_RS27270 (NV394_27270) | 116589..117494 | - | 906 | Protein_149 | IS1380 family transposase ISEcp1 | Transposase |
| NV394_RS27275 (NV394_27275) | 117733..118475 | + | 743 | Protein_150 | ISKra4 family transposase ISKpn19 | Transposase |
| NV394_RS27280 (NV394_27280) | 118508..118936 | + | 429 | Protein_151 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NV394_RS27285 (NV394_27285) | 119255..119911 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NV394_RS27290 (NV394_27290) | 120193..121344 | - | 1152 | Protein_153 | ISKra4 family transposase ISKpn19 | Transposase |
| NV394_RS27295 (NV394_27295) | 121409..122113 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NV394_RS27300 (NV394_27300) | 122401..123261 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NV394_RS27305 (NV394_27305) | 123521..123997 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| NV394_RS27310 (NV394_27310) | 124044..124919 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| NV394_RS27315 (NV394_27315) | 125254..125448 | - | 195 | Protein_158 | IS1380 family transposase | - |
| NV394_RS27320 (NV394_27320) | 125505..126202 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| NV394_RS27325 (NV394_27325) | 126218..127123 | - | 906 | Protein_160 | IS1380 family transposase ISEcp1 | Transposase |
| NV394_RS27330 (NV394_27330) | 127362..128104 | + | 743 | Protein_161 | ISKra4 family transposase ISKpn19 | Transposase |
| NV394_RS27335 (NV394_27335) | 128137..128565 | + | 429 | Protein_162 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NV394_RS27340 (NV394_27340) | 128884..129540 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|