MGE detailed information
MGE type: Genomic_island MGE length: 10583 bp
Accession: NZ_CP102827 Location: 3927171..3937753 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Accession: NZ_CP102827 Location: 3927171..3937753 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV345_RS19025 (3923087) | 3923087..3923542 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NV345_RS19030 (3923684) | 3923684..3924913 | + | 1230 | WP_000036841.1 | amino acid permease | - |
| NV345_RS19035 (3924944) | 3924944..3925216 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NV345_RS19040 (3925338) | 3925338..3926216 | + | 879 | WP_089541746.1 | nickel/cobalt efflux protein RcnA | - |
| NV345_RS19045 (3926426) | 3926426..3927184 | - | 759 | WP_023227731.1 | hypothetical protein | - |
| NV345_RS19050 (3927171) | 3927171..3927683 | - | 513 | WP_000336260.1 | CaiF/GrlA family transcriptional regulator | - |
| NV345_RS19055 (3927828) | 3927828..3928904 | - | 1077 | WP_023227730.1 | fimbrial OM outer membrane protein | - |
| NV345_RS19060 (3928901) | 3928901..3929644 | - | 744 | WP_000798491.1 | Chaperone protein PapD | VF |
| NV345_RS19065 (3929685) | 3929685..3932174 | - | 2490 | WP_064441659.1 | Outer membrane usher protein PapC | VF |
| NV345_RS19070 (3932294) | 3932294..3932881 | - | 588 | WP_023227728.1 | putative fimbrial-like protein YbgD | VF |
| NV345_RS19075 (3933600) | 3933600..3934232 | - | 633 | WP_023227727.1 | YfdX family protein | - |
| NV345_RS19080 (3934279) | 3934279..3934815 | - | 537 | WP_023227726.1 | Attachment invasion locus protein | VF |
| NV345_RS19085 (3935619) | 3935619..3936017 | - | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NV345_RS19090 (3936017) | 3936017..3936244 | - | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NV345_RS19095 (3936412) | 3936412..3936672 | + | 261 | WP_023227725.1 | hypothetical protein | - |
| NV345_RS19100 (3936947) | 3936947..3937753 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| NV345_RS19110 (3938038) | 3938038..3938796 | - | 759 | WP_000244318.1 | amidase activator ActS | - |
| NV345_RS19115 (3939061) | 3939061..3939606 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NV345_RS19120 (3939682) | 3939682..3941199 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|