MGE detailed information
MGE type: Prophage MGE length: 24121 bp
Accession: NZ_CP102827 Location: 2711754..2735874 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Accession: NZ_CP102827 Location: 2711754..2735874 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV345_RS13120 () | 2707406..2707827 | + | 422 | Protein_2548 | tyrosine-type recombinase/integrase | - |
| NV345_RS13125 () | 2708767..2709567 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| NV345_RS13130 () | 2709596..2709724 | - | 129 | Protein_2550 | helix-turn-helix domain-containing protein | - |
| NV345_RS13135 () | 2710047..2710151 | - | 105 | Protein_2551 | DUF4113 domain-containing protein | - |
| NV345_RS13140 () | 2710214..2710984 | + | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| NV345_RS13145 () | 2710980..2711168 | + | 189 | Protein_2553 | tail fiber assembly protein | - |
| NV345_RS13150 () | 2711420..2711605 | + | 186 | WP_071787785.1 | PagK family vesicle-borne virulence factor | - |
| NV345_RS13155 () | 2711696..2711805 | - | 110 | Protein_2555 | tail fiber assembly protein | - |
| NV345_RS13160 () | 2711854..2712185 | - | 332 | Protein_2556 | DUF1353 domain-containing protein | - |
| NV345_RS13165 () | 2712291..2712824 | - | 534 | Protein_2557 | DUF4376 domain-containing protein | - |
| NV345_RS13170 () | 2713094..2713744 | + | 651 | Protein_2558 | hypothetical protein ; Integrase | Integrase |
| - | 2713863..2714008 | + | 146 | - | - | Antitoxin Detail |
| - | 2713865..2713968 | - | 104 | - | - | Toxin Detail |
| NV345_RS13175 () | 2714108..2714461 | - | 354 | WP_000722368.1 | YebY family protein | - |
| NV345_RS13180 () | 2714478..2715353 | - | 876 | WP_001579467.1 | copper homeostasis membrane protein CopD | - |
| NV345_RS13185 () | 2715354..2715728 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NV345_RS13190 () | 2715866..2716096 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NV345_RS13195 () | 2716204..2716860 | + | 657 | WP_023227121.1 | carbon-nitrogen hydrolase family protein | - |
| NV345_RS13200 () | 2716884..2717582 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NV345_RS13205 () | 2717617..2719668 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| NV345_RS13210 () | 2719881..2720540 | - | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| NV345_RS13215 () | 2720634..2720987 | - | 354 | WP_001042123.1 | protein YebF | - |
| NV345_RS13220 () | 2721055..2721345 | - | 291 | WP_001579458.1 | DNA damage-inducible protein YebG | - |
| NV345_RS13225 () | 2721476..2722654 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NV345_RS13230 () | 2722754..2723395 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NV345_RS13235 () | 2723433..2725244 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NV345_RS13240 () | 2725479..2726954 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NV345_RS13245 () | 2727296..2728165 | + | 870 | WP_020898861.1 | MurR/RpiR family transcriptional regulator | - |
| NV345_RS13250 () | 2728289..2729731 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NV345_RS13255 () | 2729804..2730775 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NV345_RS13260 () | 2730892..2732211 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NV345_RS13265 () | 2732227..2733169 | - | 943 | Protein_2577 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NV345_RS13270 () | 2733248..2734003 | + | 756 | WP_023227119.1 | Zinc import ATP-binding protein ZnuC | VF |
| NV345_RS13275 () | 2734000..2734785 | + | 786 | WP_023227118.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NV345_RS13280 () | 2734864..2735874 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NV345_RS13285 () | 2735883..2736494 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NV345_RS13290 () | 2736914..2737810 | + | 897 | WP_077909983.1 | DUF4034 domain-containing protein | - |
| NV345_RS13295 () | 2738436..2739035 | + | 600 | WP_023227115.1 | YebB family permuted papain-like enzyme | - |
| NV345_RS13300 () | 2739037..2739558 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NV345_RS13305 () | 2739595..2740335 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NV345_RS13310 () | 2740365..2740817 | - | 453 | WP_000653694.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|