MGE detailed information
MGE type: Genomic_island MGE length: 43562 bp
Accession: NZ_CP102827 Location: 1094039..1137600 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Accession: NZ_CP102827 Location: 1094039..1137600 Organism: Salmonella enterica subsp. enterica serovar Indiana strain XZ14C1328 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV345_RS04995 () | 1090284..1090829 | + | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
| NV345_RS05000 () | 1090853..1092361 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NV345_RS05005 () | 1092424..1092534 | + | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| NV345_RS05010 () | 1092661..1092993 | + | 333 | WP_077907151.1 | hypothetical protein | - |
| NV345_RS05015 () | 1093249..1093734 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| NV345_RS05020 () | 1093802..1093996 | + | 195 | Protein_960 | type VI secretion system lipoprotein TssJ | - |
| NV345_RS05025 () | 1094039..1094524 | + | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| NV345_RS05030 () | 1094509..1094892 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NV345_RS05035 () | 1095035..1095520 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NV345_RS05040 () | 1095587..1096123 | + | 537 | WP_023227772.1 | hypothetical protein | VF |
| NV345_RS05045 () | 1096127..1097470 | + | 1344 | WP_023227773.1 | hypothetical protein | VF |
| NV345_RS05050 () | 1097467..1098771 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NV345_RS05055 () | 1098776..1099549 | + | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| NV345_RS05060 () | 1099751..1100182 | + | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| NV345_RS05065 () | 1100216..1104085 | + | 3870 | WP_023227775.1 | hypothetical protein | VF |
| NV345_RS05070 () | 1104085..1104852 | + | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| NV345_RS05075 () | 1104895..1105365 | + | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| NV345_RS05080 () | 1105350..1105811 | + | 462 | WP_001668725.1 | hypothetical protein | - |
| NV345_RS05085 () | 1105847..1105941 | + | 95 | Protein_973 | cytoplasmic protein | - |
| NV345_RS05090 () | 1105938..1106354 | + | 417 | WP_023227777.1 | DUF2195 family protein | - |
| NV345_RS05095 () | 1106378..1106899 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| NV345_RS05100 () | 1107296..1109485 | + | 2190 | WP_023227778.1 | hypothetical protein | VF |
| NV345_RS05105 () | 1109509..1109955 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| NV345_RS05110 () | 1109974..1114098 | + | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| NV345_RS05115 () | 1114099..1114707 | + | 609 | WP_053505599.1 | hypothetical protein | - |
| NV345_RS05120 () | 1114850..1114987 | - | 138 | WP_023227287.1 | hypothetical protein | - |
| NV345_RS05125 () | 1115007..1115852 | + | 846 | Protein_981 | hypothetical protein | VF |
| NV345_RS05130 () | 1116233..1116697 | + | 465 | WP_127201574.1 | hypothetical protein | - |
| NV345_RS05135 () | 1116743..1116994 | - | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1116753..1116978 | + | 226 | - | - | Antitoxin Detail |
| NV345_RS05140 () | 1117058..1117759 | + | 702 | Protein_984 | integrase core domain-containing protein | - |
| NV345_RS05145 () | 1118527..1119021 | + | 495 | WP_051129373.1 | hypothetical protein | - |
| NV345_RS05150 () | 1119154..1119651 | + | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| NV345_RS05155 () | 1119726..1120466 | + | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| NV345_RS05160 () | 1120490..1123000 | + | 2511 | WP_053505593.1 | F1 capsule-anchoring protein | VF |
| NV345_RS05165 () | 1123022..1123492 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| NV345_RS05170 () | 1123900..1124721 | + | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| NV345_RS05175 () | 1124804..1125044 | + | 241 | Protein_991 | PerC family transcriptional regulator | - |
| NV345_RS05180 () | 1125538..1126485 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NV345_RS05185 () | 1126605..1126724 | + | 120 | Protein_993 | hypothetical protein | - |
| NV345_RS05190 () | 1126805..1126991 | + | 187 | Protein_994 | IS3 family transposase IS1351 | Transposase |
| NV345_RS05195 () | 1127031..1127715 | - | 685 | Protein_995 | IS21 family transposase ISEc62 | Transposase |
| NV345_RS05200 () | 1128622..1129332 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| NV345_RS05205 () | 1129440..1129958 | + | 519 | WP_001056552.1 | CFA/I fimbrial subunit B | VF |
| NV345_RS05210 () | 1130067..1132754 | + | 2688 | WP_023226795.1 | hypothetical protein | VF |
| NV345_RS05215 () | 1132789..1133835 | + | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| NV345_RS05220 () | 1133968..1134423 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NV345_RS05225 () | 1134563..1135180 | + | 618 | WP_023226793.1 | protein TioA | - |
| NV345_RS05230 () | 1135782..1135915 | - | 134 | Protein_1002 | transposase | - |
| NV345_RS05235 () | 1135951..1136139 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| NV345_RS05240 () | 1136143..1136862 | - | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| NV345_RS05245 () | 1137193..1137600 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NV345_RS05250 () | 1137971..1138738 | - | 768 | WP_023226791.1 | amidohydrolase | - |
| NV345_RS05255 () | 1138847..1141291 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NV345_RS05260 () | 1141531..1142109 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|