MGE detailed information
MGE type: Genomic_island MGE length: 53333 bp
Accession: NZ_CP102756 Location: 1248547..1301879 Organism: Salmonella enterica subsp. enterica serovar Kentucky isolate AH19MCS11 Replicon: chromosome
Accession: NZ_CP102756 Location: 1248547..1301879 Organism: Salmonella enterica subsp. enterica serovar Kentucky isolate AH19MCS11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NWA04_RS05945 () | 1244798..1245340 | + | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| NWA04_RS05950 () | 1245364..1246872 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NWA04_RS05955 () | 1246887..1247045 | + | 159 | WP_223228256.1 | BPSL0067 family protein | - |
| NWA04_RS05960 () | 1247172..1247504 | + | 333 | WP_077944511.1 | hypothetical protein | - |
| NWA04_RS05965 () | 1247758..1248243 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| NWA04_RS05970 () | 1248310..1248504 | + | 195 | Protein_1151 | type VI secretion system lipoprotein TssJ | - |
| NWA04_RS05975 () | 1248547..1249032 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| NWA04_RS05980 () | 1249017..1249400 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NWA04_RS05985 () | 1249543..1250027 | + | 485 | Protein_1154 | hypothetical protein | VF |
| NWA04_RS05990 () | 1250094..1250630 | + | 537 | WP_023202967.1 | hypothetical protein | VF |
| NWA04_RS05995 () | 1250634..1251977 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| NWA04_RS06000 () | 1251974..1253278 | + | 1305 | WP_023224021.1 | Peptidoglycan-associated lipoprotein | VF |
| NWA04_RS06005 () | 1253283..1254056 | + | 774 | WP_023224022.1 | Rap1a/Tai family immunity protein | - |
| NWA04_RS06010 () | 1254259..1254690 | + | 432 | WP_077905250.1 | Shiga toxin A subunit | - |
| NWA04_RS06015 () | 1254724..1258617 | + | 3894 | WP_058654875.1 | hypothetical protein | VF |
| NWA04_RS06020 () | 1258617..1259384 | + | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| NWA04_RS06025 () | 1259427..1259897 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| NWA04_RS06030 () | 1259882..1260343 | + | 462 | WP_023240609.1 | hypothetical protein | - |
| NWA04_RS06035 () | 1260379..1260459 | + | 81 | Protein_1164 | hypothetical protein | - |
| NWA04_RS06040 () | 1260470..1261171 | + | 702 | WP_023181852.1 | hypothetical protein | - |
| NWA04_RS06045 () | 1261185..1261634 | + | 450 | WP_223152164.1 | hypothetical protein | - |
| NWA04_RS06050 () | 1261666..1263888 | + | 2223 | WP_052939575.1 | Actin cross-linking toxin VgrG1 | VF |
| NWA04_RS06055 () | 1263903..1264334 | + | 432 | WP_001199685.1 | DcrB-related protein | - |
| NWA04_RS06060 () | 1264365..1268903 | + | 4539 | WP_223163370.1 | RHS repeat-associated core domain-containing protein | - |
| NWA04_RS06065 () | 1268900..1269448 | + | 549 | WP_023236940.1 | hypothetical protein | - |
| NWA04_RS06070 () | 1269494..1270063 | - | 570 | WP_052939574.1 | DUF4291 domain-containing protein | - |
| NWA04_RS06075 () | 1270777..1271193 | + | 417 | WP_001596567.1 | DUF2195 family protein | - |
| NWA04_RS06080 () | 1271217..1271738 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| NWA04_RS06085 () | 1272135..1274324 | + | 2190 | WP_052939573.1 | hypothetical protein | VF |
| NWA04_RS06090 () | 1274348..1274794 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| NWA04_RS06095 () | 1274813..1278946 | + | 4134 | WP_072106084.1 | RHS repeat-associated core domain-containing protein | - |
| NWA04_RS06100 () | 1278960..1279481 | + | 522 | WP_023203424.1 | SMI1/KNR4 family protein | - |
| NWA04_RS06105 () | 1279842..1280249 | + | 408 | WP_024146273.1 | DUF4329 domain-containing protein | - |
| NWA04_RS06110 () | 1280268..1280576 | + | 309 | WP_023203423.1 | hypothetical protein | - |
| NWA04_RS06115 () | 1280635..1280892 | - | 258 | WP_023203422.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1280717..1281049 | + | 333 | - | - | Antitoxin Detail |
| NWA04_RS06120 () | 1281965..1282240 | + | 276 | WP_223163371.1 | hypothetical protein | - |
| NWA04_RS06125 () | 1282333..1282800 | + | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| NWA04_RS06130 () | 1283118..1283396 | + | 279 | WP_012664366.1 | hypothetical protein | - |
| NWA04_RS06135 () | 1283541..1283777 | - | 237 | Protein_1184 | type I toxin-antitoxin system SymE family toxin | - |
| NWA04_RS06140 () | 1283830..1284534 | + | 705 | Protein_1185 | integrase core domain-containing protein | - |
| NWA04_RS06145 () | 1285295..1285792 | + | 498 | WP_058654878.1 | Saf-pilin pilus formation protein SafA | - |
| NWA04_RS06150 () | 1285867..1286607 | + | 741 | WP_052939572.1 | Chaperone protein caf1M | VF |
| NWA04_RS06155 () | 1286631..1289141 | + | 2511 | WP_023223985.1 | F1 capsule-anchoring protein | VF |
| NWA04_RS06160 () | 1289163..1289633 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| NWA04_RS06165 () | 1290041..1290862 | + | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| NWA04_RS06170 () | 1290945..1291185 | + | 241 | Protein_1191 | PerC family transcriptional regulator | - |
| NWA04_RS06175 () | 1291678..1292625 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NWA04_RS06180 () | 1292745..1292864 | + | 120 | Protein_1193 | hypothetical protein | - |
| NWA04_RS06185 () | 1292945..1293131 | + | 187 | Protein_1194 | IS3 family transposase IS1351 | Transposase |
| NWA04_RS06190 () | 1293171..1293728 | - | 558 | Protein_1195 | IS21 family transposase ISEc62 | Transposase |
| NWA04_RS06195 () | 1294764..1295474 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| NWA04_RS06200 () | 1295525..1296100 | + | 576 | WP_023223987.1 | CFA/I fimbrial subunit B | VF |
| NWA04_RS06205 () | 1296209..1298896 | + | 2688 | WP_052939571.1 | hypothetical protein | VF |
| NWA04_RS06210 () | 1298919..1299998 | + | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| NWA04_RS06215 () | 1300131..1300586 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NWA04_RS06220 () | 1300726..1301343 | + | 618 | WP_000241747.1 | protein TioA | - |
| NWA04_RS06225 () | 1301945..1302078 | - | 134 | Protein_1202 | transposase | - |
| NWA04_RS06230 () | 1302114..1302302 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| NWA04_RS06235 () | 1302306..1303025 | - | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| NWA04_RS06240 () | 1303356..1303763 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NWA04_RS06245 () | 1304073..1304840 | - | 768 | WP_000015789.1 | amidohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|