MGE detailed information
MGE type: IS/Tn MGE length: 1329 bp
Accession: NZ_CP102749 Location: 4405110..4406438 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Accession: NZ_CP102749 Location: 4405110..4406438 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NV347_RS19820 (NV347_19820) | 4400594..4401055 | - | 462 | WP_039482099.1 | YhbP family protein | - |
NV347_RS19825 (NV347_19825) | 4401065..4401511 | - | 447 | WP_039482100.1 | helix-turn-helix domain-containing protein | - |
NV347_RS19830 (NV347_19830) | 4401665..4402978 | + | 1314 | WP_225969787.1 | MFS transporter | - |
NV347_RS19835 (NV347_19835) | 4402975..4404327 | + | 1353 | WP_039512786.1 | pyridoxal-dependent decarboxylase | - |
NV347_RS19840 (NV347_19840) | 4404421..4404879 | - | 459 | WP_010286715.1 | hypothetical protein | - |
NV347_RS19845 (NV347_19845) | 4405110..4406438 | + | 1329 | WP_161546580.1 | IS4 family transposase IS4 | Transposase |
NV347_RS19850 (NV347_19850) | 4406744..4407004 | + | 261 | WP_039482487.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
NV347_RS19855 (NV347_19855) | 4407078..4407449 | + | 372 | WP_039482489.1 | helix-turn-helix transcriptional regulator | - |
NV347_RS19860 (NV347_19860) | 4407608..4408024 | - | 417 | WP_039482106.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
NV347_RS19865 (NV347_19865) | 4408021..4408332 | - | 312 | WP_039482109.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
NV347_RS19870 (NV347_19870) | 4409761..4410054 | - | 294 | WP_102117148.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
NV347_RS19875 (NV347_19875) | 4410055..4410972 | - | 918 | WP_012822191.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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