MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 9872 bp
Accession: NZ_CP102749 Location: 3851203..3861074 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Accession: NZ_CP102749 Location: 3851203..3861074 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV347_RS17360 (NV347_17360) | 3846607..3848058 | + | 1452 | WP_039483800.1 | L-asparagine permease | - |
| NV347_RS17365 (NV347_17365) | 3848119..3850272 | - | 2154 | WP_039483798.1 | ornithine decarboxylase | - |
| NV347_RS17370 (NV347_17370) | 3850504..3850635 | - | 132 | WP_258210277.1 | hypothetical protein | - |
| NV347_RS17380 (NV347_17380) | 3851380..3852639 | + | 1260 | WP_258210278.1 | Prophage integrase IntS ; Integrase | Integrase |
| NV347_RS17385 (NV347_17385) | 3852745..3852939 | - | 195 | WP_258210279.1 | YlcI/YnfO family protein | - |
| NV347_RS17390 (NV347_17390) | 3853125..3853466 | + | 342 | WP_258210280.1 | hypothetical protein | - |
| NV347_RS17395 (NV347_17395) | 3854366..3855109 | + | 744 | WP_258210281.1 | MobC family replication-relaxation protein | - |
| NV347_RS17400 (NV347_17400) | 3855168..3855386 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NV347_RS17405 (NV347_17405) | 3855389..3855694 | + | 306 | WP_258210282.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NV347_RS17410 (NV347_17410) | 3855848..3858220 | - | 2373 | WP_258210283.1 | AAA family ATPase | - |
| NV347_RS17415 (NV347_17415) | 3858213..3858932 | - | 720 | WP_258210284.1 | hypothetical protein | - |
| NV347_RS17420 (NV347_17420) | 3858929..3860362 | - | 1434 | WP_258210285.1 | hypothetical protein | - |
| NV347_RS17425 (NV347_17425) | 3861323..3861466 | - | 144 | Protein_3395 | helix-turn-helix domain-containing protein | - |
| NV347_RS17430 (NV347_17430) | 3861473..3861721 | + | 249 | WP_039513012.1 | helix-turn-helix transcriptional regulator | - |
| NV347_RS17435 (NV347_17435) | 3861736..3861954 | + | 219 | WP_039483773.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| NV347_RS17440 (NV347_17440) | 3862075..3862368 | - | 294 | WP_039483771.1 | DUF1778 domain-containing protein | - |
| NV347_RS17445 (NV347_17445) | 3862575..3863075 | - | 501 | WP_039461785.1 | serine acetyltransferase | - |
| NV347_RS17450 (NV347_17450) | 3863102..3864496 | - | 1395 | WP_039483769.1 | DUF4832 domain-containing protein | - |
| NV347_RS17455 (NV347_17455) | 3864535..3864942 | - | 408 | WP_039483767.1 | hypothetical protein | - |
| NV347_RS17460 (NV347_17460) | 3864945..3866057 | - | 1113 | WP_039483765.1 | glycosyltransferase family 4 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|