MGE detailed information
MGE type: Prophage MGE length: 33395 bp
Accession: NZ_CP102749 Location: 3699946..3733340 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Accession: NZ_CP102749 Location: 3699946..3733340 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV347_RS16560 (NV347_16560) | 3695937..3696653 | + | 717 | WP_010306189.1 | two-component system response regulator BtsR | - |
| NV347_RS16565 (NV347_16565) | 3696700..3697050 | + | 351 | WP_039488078.1 | DUF2799 domain-containing protein | - |
| NV347_RS16570 (NV347_16570) | 3697111..3698318 | + | 1208 | Protein_3232 | IS256 family transposase | - |
| NV347_RS16575 (NV347_16575) | 3698632..3699570 | + | 939 | WP_039483930.1 | class I SAM-dependent methyltransferase | - |
| NV347_RS16580 (NV347_16580) | 3699946..3700977 | - | 1032 | WP_116238125.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NV347_RS16585 (NV347_16585) | 3700996..3701859 | - | 864 | WP_116238126.1 | helix-turn-helix domain-containing protein | - |
| NV347_RS16590 (NV347_16590) | 3701980..3702204 | + | 225 | WP_039465155.1 | hypothetical protein | - |
| NV347_RS16595 (NV347_16595) | 3702243..3702752 | + | 510 | WP_116238128.1 | phage regulatory CII family protein | - |
| NV347_RS16600 (NV347_16600) | 3702765..3703181 | + | 417 | WP_258210260.1 | hypothetical protein | - |
| NV347_RS16605 (NV347_16605) | 3703146..3703346 | - | 201 | WP_125233400.1 | hypothetical protein | - |
| NV347_RS16610 (NV347_16610) | 3703479..3703655 | + | 177 | WP_189645145.1 | hypothetical protein | - |
| NV347_RS16615 (NV347_16615) | 3703652..3704152 | + | 501 | WP_212768925.1 | replication protein B | - |
| NV347_RS16620 (NV347_16620) | 3704221..3704463 | + | 243 | WP_256736986.1 | DUF2732 family protein | - |
| NV347_RS16625 (NV347_16625) | 3704463..3704774 | + | 312 | WP_130622829.1 | DUF5405 family protein | - |
| NV347_RS16630 (NV347_16630) | 3704771..3704980 | + | 210 | WP_116237748.1 | hypothetical protein | - |
| NV347_RS16635 (NV347_16635) | 3704977..3707283 | + | 2307 | WP_258210261.1 | replication endonuclease | - |
| NV347_RS16640 (NV347_16640) | 3707280..3707588 | + | 309 | WP_044208967.1 | hypothetical protein | - |
| NV347_RS16645 (NV347_16645) | 3707588..3707770 | + | 183 | WP_072014151.1 | hypothetical protein | - |
| NV347_RS16650 (NV347_16650) | 3708432..3709250 | + | 819 | WP_044208971.1 | hypothetical protein | - |
| NV347_RS16655 (NV347_16655) | 3709252..3709998 | + | 747 | WP_052510498.1 | hypothetical protein | - |
| NV347_RS16660 (NV347_16660) | 3710055..3711065 | - | 1011 | WP_044208974.1 | phage portal protein | - |
| NV347_RS16665 (NV347_16665) | 3711062..3712831 | - | 1770 | WP_044208977.1 | terminase ATPase subunit family protein | - |
| NV347_RS16670 (NV347_16670) | 3712971..3713825 | + | 855 | WP_258210262.1 | GPO family capsid scaffolding protein | - |
| NV347_RS16675 (NV347_16675) | 3713877..3715061 | + | 1185 | WP_044208982.1 | phage major capsid protein, P2 family | - |
| NV347_RS16680 (NV347_16680) | 3715065..3715724 | + | 660 | WP_258210263.1 | terminase endonuclease subunit | - |
| NV347_RS16685 (NV347_16685) | 3715816..3716319 | + | 504 | WP_258210264.1 | head completion/stabilization protein | - |
| NV347_RS16690 (NV347_16690) | 3716319..3716522 | + | 204 | WP_005967821.1 | tail protein X | - |
| NV347_RS16695 (NV347_16695) | 3716513..3716734 | + | 222 | WP_033071244.1 | HP1 family phage holin | - |
| NV347_RS16700 (NV347_16700) | 3716718..3717227 | + | 510 | WP_230242423.1 | lysozyme | - |
| NV347_RS16705 (NV347_16705) | 3717224..3717667 | + | 444 | WP_039512490.1 | Rz-like lysis system protein LysB | - |
| NV347_RS16710 (NV347_16710) | 3717552..3717794 | + | 243 | WP_225969782.1 | Rz1-like lysis system protein LysC | - |
| NV347_RS16715 (NV347_16715) | 3717757..3718212 | + | 456 | WP_039512489.1 | phage tail protein | - |
| NV347_RS16720 (NV347_16720) | 3718205..3718654 | + | 450 | WP_039512488.1 | phage virion morphogenesis protein | - |
| NV347_RS16725 (NV347_16725) | 3718683..3719024 | - | 342 | WP_039512487.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| NV347_RS16730 (NV347_16730) | 3719103..3719417 | - | 315 | WP_015841346.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NV347_RS16735 (NV347_16735) | 3719969..3720580 | + | 612 | WP_258210265.1 | KilA-N domain-containing protein | - |
| NV347_RS16740 (NV347_16740) | 3720625..3721692 | - | 1068 | WP_258210266.1 | hypothetical protein | - |
| NV347_RS16745 (NV347_16745) | 3721785..3722420 | + | 636 | WP_258210267.1 | phage baseplate assembly protein V | - |
| NV347_RS16750 (NV347_16750) | 3722417..3722761 | + | 345 | WP_239768151.1 | GPW/gp25 family protein | - |
| NV347_RS16755 (NV347_16755) | 3722765..3723673 | + | 909 | WP_258210268.1 | baseplate assembly protein | - |
| NV347_RS16760 (NV347_16760) | 3723666..3724277 | + | 612 | WP_258210269.1 | phage tail protein I | - |
| NV347_RS16765 (NV347_16765) | 3724274..3726502 | + | 2229 | WP_258210270.1 | phage tail protein | - |
| NV347_RS16770 (NV347_16770) | 3726816..3727985 | + | 1170 | WP_258210271.1 | phage tail sheath protein | - |
| NV347_RS16775 (NV347_16775) | 3728000..3728521 | + | 522 | WP_010310782.1 | phage major tail tube protein | - |
| NV347_RS16780 (NV347_16780) | 3728589..3728885 | + | 297 | WP_258210272.1 | phage tail assembly protein | - |
| NV347_RS16785 (NV347_16785) | 3728900..3729022 | + | 123 | WP_010310409.1 | GpE family phage tail protein | - |
| NV347_RS16790 (NV347_16790) | 3729015..3731693 | + | 2679 | WP_258210273.1 | phage tail tape measure protein | - |
| NV347_RS16795 (NV347_16795) | 3731695..3732180 | + | 486 | WP_103161057.1 | phage tail protein | - |
| NV347_RS16800 (NV347_16800) | 3732177..3733340 | + | 1164 | WP_258210274.1 | phage late control D family protein | - |
| NV347_RS16805 (NV347_16805) | 3733423..3733641 | + | 219 | WP_010308353.1 | DNA-binding transcriptional regulator | - |
| NV347_RS16810 (NV347_16810) | 3733815..3734162 | - | 348 | WP_039483928.1 | 50S ribosomal protein L19 | - |
| NV347_RS16815 (NV347_16815) | 3734226..3734981 | - | 756 | WP_039483926.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| NV347_RS16820 (NV347_16820) | 3735020..3735568 | - | 549 | WP_039483924.1 | ribosome maturation factor RimM | - |
| NV347_RS16825 (NV347_16825) | 3735587..3735835 | - | 249 | WP_010285998.1 | 30S ribosomal protein S16 | - |
| NV347_RS16830 (NV347_16830) | 3735993..3737354 | - | 1362 | WP_039483922.1 | signal recognition particle protein | - |
| NV347_RS16835 (NV347_16835) | 3737525..3738319 | + | 795 | WP_039483921.1 | inner membrane protein YpjD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|