MGE detailed information
MGE type: Genomic_island MGE length: 8823 bp
Accession: NZ_CP102749 Location: 326486..335308 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Accession: NZ_CP102749 Location: 326486..335308 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV347_RS01375 (NV347_01375) | 321674..322084 | - | 411 | WP_225969814.1 | DUF596 domain-containing protein | - |
| NV347_RS01380 (NV347_01380) | 322068..322454 | - | 387 | WP_192828429.1 | hypothetical protein | - |
| NV347_RS01385 (NV347_01385) | 322570..323115 | + | 546 | WP_039513372.1 | hypothetical protein | - |
| NV347_RS01390 (NV347_01390) | 323158..323715 | - | 558 | WP_039513374.1 | hypothetical protein | - |
| NV347_RS01395 (NV347_01395) | 323750..324187 | - | 438 | WP_052012046.1 | type II toxin-antitoxin system VapC family toxin | - |
| NV347_RS01400 (NV347_01400) | 324190..324429 | - | 240 | WP_039483142.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| NV347_RS01405 (NV347_01405) | 324882..326300 | - | 1419 | WP_039483139.1 | Fic family protein | - |
| NV347_RS01410 (NV347_01410) | 326486..326812 | - | 327 | WP_111778839.1 | helix-turn-helix transcriptional regulator | - |
| NV347_RS01415 (NV347_01415) | 326910..327167 | + | 258 | WP_111778840.1 | helix-turn-helix transcriptional regulator | - |
| NV347_RS01420 (NV347_01420) | 327183..327500 | - | 318 | WP_039513379.1 | helix-turn-helix transcriptional regulator | - |
| NV347_RS01425 (NV347_01425) | 328025..329863 | + | 1839 | WP_161546754.1 | DUF3578 domain-containing protein | - |
| NV347_RS01430 (NV347_01430) | 329882..332371 | + | 2490 | WP_161546755.1 | restriction endonuclease-like protein | - |
| NV347_RS01435 (NV347_01435) | 332557..333381 | - | 825 | WP_249642132.1 | DNA damage-inducible protein D | - |
| NV347_RS01440 (NV347_01440) | 333577..333663 | + | 87 | Protein_281 | integrase | - |
| NV347_RS01445 (NV347_01445) | 333672..333758 | - | 87 | Protein_282 | hypothetical protein | - |
| NV347_RS01450 (NV347_01450) | 333868..334392 | + | 525 | WP_039483130.1 | hypothetical protein | Antitoxin Detail |
| NV347_RS01455 (NV347_01455) | 334421..335308 | + | 888 | WP_161546756.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NV347_RS01460 (NV347_01460) | 335414..336277 | - | 864 | WP_039483124.1 | YicC/YloC family endoribonuclease | - |
| NV347_RS01465 (NV347_01465) | 336376..337284 | - | 909 | WP_039483122.1 | LysR family transcriptional regulator | - |
| NV347_RS01470 (NV347_01470) | 337498..338445 | - | 948 | WP_258210313.1 | isoaspartyl peptidase/L-asparaginase | - |
| NV347_RS01475 (NV347_01475) | 338505..339326 | - | 822 | WP_039483117.1 | M55 family metallopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|