MGE detailed information
MGE type: IScluster/Tn MGE length: 6770 bp
Accession: NZ_CP102698 Location: 29094..35863 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-4
Accession: NZ_CP102698 Location: 29094..35863 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV952_RS24210 (24571) | 24571..25641 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| NV952_RS24215 (25660) | 25660..26868 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| NV952_RS24220 (27175) | 27175..27957 | - | 783 | WP_023063753.1 | protein FinQ | - |
| NV952_RS24225 (28153) | 28153..28470 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NV952_RS24230 (28467) | 28467..29000 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| NV952_RS24235 (29094) | 29094..30239 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| NV952_RS24245 (31444) | 31444..31542 | + | 99 | Protein_31 | ethanolamine utilization protein EutE | - |
| NV952_RS24250 (31614) | 31614..31823 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NV952_RS24255 (32215) | 32215..32391 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| NV952_RS24260 (32456) | 32456..32551 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| NV952_RS24265 (33052) | 33052..33303 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| NV952_RS24270 (33375) | 33375..33527 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| NV952_RS24275 (33848) | 33848..34222 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| NV952_RS24280 (34375) | 34375..35532 | + | 1158 | Protein_38 | IS1380 family transposase ISEcp1 | Transposase |
| NV952_RS24285 (35588) | 35588..36285 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| NV952_RS24290 (36296) | 36296..36604 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| NV952_RS24295 (37046) | 37046..37333 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NV952_RS24300 (37371) | 37371..37529 | - | 159 | Protein_42 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|