MGE detailed information
MGE type: Mobilizable plasmid MGE length: 38440 bp
Accession: NZ_CP102698 Location: 1..38440 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-4
Accession: NZ_CP102698 Location: 1..38440 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV952_RS24090 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| NV952_RS24095 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| NV952_RS24100 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| NV952_RS24105 (3667) | 3667..5013 | + | 1347 | WP_039052405.1 | protein YagA | - |
| NV952_RS24110 (5544) | 5544..5846 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| NV952_RS24115 (5843) | 5843..6469 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| NV952_RS24120 (6657) | 6657..7928 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| NV952_RS24125 (7928) | 7928..8347 | - | 420 | WP_057109540.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NV952_RS24130 (8705) | 8705..10606 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| NV952_RS24135 (10789) | 10789..11682 | + | 894 | Protein_9 | hypothetical protein | - |
| NV952_RS24140 (11677) | 11677..12030 | + | 354 | Protein_10 | plasmid SOS inhibition protein A | - |
| NV952_RS24145 (12027) | 12027..12623 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| NV952_RS24150 (13085) | 13085..13585 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| NV952_RS24155 (14314) | 14314..14748 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| NV952_RS24160 (14842) | 14842..15108 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| NV952_RS24165 (15285) | 15285..15674 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| NV952_RS24170 (15671) | 15671..16573 | + | 903 | WP_011264057.1 | ISNCY family transposase ISRor2 | VF |
| NV952_RS24175 (16635) | 16635..16841 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| NV952_RS24180 (16872) | 16872..17123 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NV952_RS24185 (17703) | 17703..18551 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| NV952_RS24190 (18638) | 18638..18973 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| NV952_RS24195 (19207) | 19207..19539 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NV952_RS24200 (19550) | 19550..22249 | + | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| NV952_RS24205 (22287) | 22287..24578 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| NV952_RS24210 (24571) | 24571..25641 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| NV952_RS24215 (25660) | 25660..26868 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| - (27048) | 27048..27105 | - | 58 | NuclAT_1 | - | - |
| NV952_RS24220 (27175) | 27175..27957 | - | 783 | WP_023063753.1 | protein FinQ | - |
| NV952_RS24225 (28153) | 28153..28470 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NV952_RS24230 (28467) | 28467..29000 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| NV952_RS24235 (29094) | 29094..30239 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| NV952_RS24245 (31444) | 31444..31542 | + | 99 | Protein_31 | ethanolamine utilization protein EutE | - |
| NV952_RS24250 (31614) | 31614..31823 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NV952_RS24255 (32215) | 32215..32391 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| NV952_RS24260 (32456) | 32456..32551 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| NV952_RS24265 (33052) | 33052..33303 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| NV952_RS24270 (33375) | 33375..33527 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (33579) | 33579..33639 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| NV952_RS24275 (33848) | 33848..34222 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| NV952_RS24280 (34375) | 34375..35532 | + | 1158 | Protein_38 | IS1380 family transposase ISEcp1 | Transposase |
| NV952_RS24285 (35588) | 35588..36285 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| NV952_RS24290 (36296) | 36296..36604 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| NV952_RS24295 (37046) | 37046..37333 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NV952_RS24300 (37371) | 37371..37529 | - | 159 | Protein_42 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|