MGE detailed information
MGE type: Prophage MGE length: 38567 bp
Accession: NZ_CP102675 Location: 3440698..3479264 Organism: Escherichia coli strain XH987 Replicon: chromosome
Accession: NZ_CP102675 Location: 3440698..3479264 Organism: Escherichia coli strain XH987 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NU950_RS18705 (3436292) | 3436292..3439132 | - | 2841 | WP_001298736.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| NU950_RS18710 (3439155) | 3439155..3440456 | - | 1302 | WP_000046272.1 | inorganic triphosphatase | - |
| NU950_RS18715 (3440698) | 3440698..3441318 | + | 621 | WP_001125332.1 | TIGR04211 family SH3 domain-containing protein | - |
| NU950_RS18720 (3441382) | 3441382..3442620 | + | 1239 | WP_000708501.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| NU950_RS18725 (3442783) | 3442783..3443604 | - | 822 | WP_001305111.1 | undecaprenyl-diphosphate phosphatase | - |
| NU950_RS18730 (3443695) | 3443695..3444063 | - | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| NU950_RS18735 (3444168) | 3444168..3444785 | + | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| NU950_RS18740 (3444798) | 3444798..3445730 | - | 933 | WP_000935209.1 | DNA-binding transcriptional activator TtdR | - |
| NU950_RS18745 (3445937) | 3445937..3446848 | + | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| NU950_RS18750 (3446845) | 3446845..3447450 | + | 606 | WP_000722962.1 | L(+)-tartrate dehydratase subunit beta | - |
| NU950_RS18755 (3447499) | 3447499..3448962 | + | 1464 | WP_000804911.1 | L-tartrate/succinate antiporter | - |
| NU950_RS18760 (3449005) | 3449005..3450018 | - | 1014 | WP_001264365.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| NU950_RS18765 (3450255) | 3450255..3450470 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| NU950_RS18770 (3450581) | 3450581..3452326 | + | 1746 | WP_000918827.1 | DNA primase | - |
| NU950_RS18775 (3452521) | 3452521..3454362 | + | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| NU950_RS18780 (3454440) | 3454440..3454946 | - | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| NU950_RS18790 (3455245) | 3455245..3456090 | - | 846 | WP_040234917.1 | DUF4942 domain-containing protein | - |
| NU950_RS18795 (3456187) | 3456187..3456384 | - | 198 | WP_000839263.1 | DUF957 domain-containing protein | - |
| NU950_RS18800 (3456396) | 3456396..3456884 | - | 489 | WP_001177592.1 | DUF5983 family protein | - |
| NU950_RS18805 (3456875) | 3456875..3457258 | - | 384 | WP_000854822.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| NU950_RS18810 (3457348) | 3457348..3457716 | - | 369 | WP_053271974.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NU950_RS18815 (3457796) | 3457796..3458017 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| NU950_RS18820 (3458086) | 3458086..3458562 | - | 477 | WP_001186747.1 | RadC family protein | - |
| NU950_RS18825 (3458577) | 3458577..3459062 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| NU950_RS18830 (3459153) | 3459153..3459971 | - | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| NU950_RS18835 (3460298) | 3460298..3462055 | - | 1758 | Protein_3294 | Ag43/Cah family autotransporter adhesin | - |
| NU950_RS18840 (3462108) | 3462108..3462812 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NU950_RS18845 (3462881) | 3462881..3464059 | - | 1179 | WP_001065546.1 | GIY-YIG nuclease family protein | - |
| NU950_RS18850 (3464052) | 3464052..3465596 | - | 1545 | WP_258383316.1 | DEAD/DEAH box helicase | - |
| NU950_RS18855 (3465696) | 3465696..3465998 | + | 303 | Protein_3298 | autotransporter adhesin family protein | - |
| NU950_RS18860 (3466055) | 3466055..3466759 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NU950_RS18865 (3466814) | 3466814..3467239 | + | 426 | Protein_3300 | TetR/AcrR family transcriptional regulator | - |
| NU950_RS18870 (3467259) | 3467259..3468047 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| NU950_RS18875 (3468047) | 3468047..3468565 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| NU950_RS18880 (3468518) | 3468518..3468985 | - | 468 | WP_096637040.1 | Glutathione transferase FosA | ARG |
| NU950_RS18885 (3469370) | 3469370..3470074 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NU950_RS18890 (3470154) | 3470154..3471140 | + | 987 | WP_001354443.1 | IS3 family transposase IS2 | Transposase |
| NU950_RS18895 (3471152) | 3471152..3471229 | - | 78 | Protein_3306 | transposase domain-containing protein | - |
| NU950_RS18900 (3471347) | 3471347..3471913 | - | 567 | WP_000287905.1 | inovirus-type Gp2 protein | - |
| NU950_RS18905 (3471941) | 3471941..3472555 | - | 615 | WP_000628304.1 | inovirus Gp2 family protein | - |
| NU950_RS18910 (3472937) | 3472937..3473497 | - | 561 | WP_000135718.1 | hypothetical protein | - |
| NU950_RS18915 (3473719) | 3473719..3474465 | - | 747 | WP_024201514.1 | hypothetical protein | - |
| NU950_RS18920 (3474528) | 3474528..3474755 | - | 228 | WP_000265818.1 | AlpA family phage regulatory protein | - |
| NU950_RS18925 (3475535) | 3475535..3477139 | + | 1605 | WP_000256688.1 | hypothetical protein | - |
| NU950_RS18930 (3477222) | 3477222..3477818 | - | 597 | WP_000268404.1 | hypothetical protein | - |
| NU950_RS18935 (3477948) | 3477948..3479264 | - | 1317 | WP_000290290.1 | Prophage integrase IntA ; Integrase | Integrase |
| NU950_RS18940 (3479561) | 3479561..3480325 | - | 765 | WP_001065895.1 | NADPH-dependent ferric chelate reductase NfeF | - |
| NU950_RS18945 (3480602) | 3480602..3481225 | + | 624 | WP_000018003.1 | DNA-binding transcriptional regulator NfeR | - |
| NU950_RS18950 (3481379) | 3481379..3482899 | - | 1521 | WP_000094682.1 | aerotaxis sensor receptor Aer | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|