MGE detailed information
MGE type: Mobilizable plasmid MGE length: 104605 bp
Accession: NZ_CP102628 Location: 1..104605 Organism: Listeria innocua strain F4078 Replicon: plasmid unnamed
Accession: NZ_CP102628 Location: 1..104605 Organism: Listeria innocua strain F4078 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NVV61_RS13890 (NVV61_13890) | 1..756 | + | 756 | WP_013315180.1 | IS21 family transposase IS712 | Transposase |
| NVV61_RS13895 (NVV61_13895) | 834..1127 | - | 294 | WP_011011055.1 | DUF3116 family protein | - |
| NVV61_RS13900 (NVV61_13900) | 1144..2298 | - | 1155 | WP_061385306.1 | cation:proton antiporter | - |
| NVV61_RS13905 (NVV61_13905) | 2445..3659 | - | 1215 | WP_064659124.1 | phosphopyruvate hydratase | - |
| NVV61_RS13910 (NVV61_13910) | 3708..4852 | + | 1145 | WP_227665701.1 | IS3 family transposase IS-LL6 | Transposase |
| NVV61_RS13915 (NVV61_13915) | 5024..5266 | - | 243 | WP_023559417.1 | hypothetical protein | - |
| NVV61_RS13920 (NVV61_13920) | 5410..5685 | + | 276 | WP_223196600.1 | hypothetical protein | - |
| NVV61_RS13925 (NVV61_13925) | 5670..6164 | + | 495 | WP_031644351.1 | hypothetical protein | - |
| NVV61_RS13930 (NVV61_13930) | 6183..6560 | + | 378 | WP_031670069.1 | hypothetical protein | - |
| NVV61_RS13935 (NVV61_13935) | 6788..7333 | + | 546 | WP_011011051.1 | hypothetical protein | - |
| NVV61_RS13940 (NVV61_13940) | 7467..7703 | + | 237 | WP_003725271.1 | helix-turn-helix transcriptional regulator | - |
| NVV61_RS13945 (NVV61_13945) | 7710..8699 | + | 990 | WP_187983847.1 | hypothetical protein | - |
| NVV61_RS13955 (NVV61_13955) | 10566..10685 | + | 120 | Protein_13 | plasmid replication protein | - |
| NVV61_RS13960 (NVV61_13960) | 10823..14017 | + | 3195 | WP_187983846.1 | helicase-related protein | - |
| NVV61_RS13965 (NVV61_13965) | 14018..14575 | + | 558 | WP_187997211.1 | hypothetical protein | - |
| NVV61_RS13970 (NVV61_13970) | 14578..16419 | + | 1842 | WP_058831732.1 | site-specific DNA-methyltransferase | - |
| NVV61_RS13975 (NVV61_13975) | 16454..19570 | + | 3117 | WP_058831733.1 | DEAD/DEAH box helicase family protein | - |
| NVV61_RS13980 (NVV61_13980) | 19684..19855 | - | 172 | Protein_18 | type II toxin-antitoxin system YafQ family toxin | - |
| NVV61_RS13985 (NVV61_13985) | 19850..19984 | - | 135 | Protein_19 | IS5 family transposase ISCARN82 | Transposase |
| NVV61_RS13990 (NVV61_13990) | 20265..20696 | + | 432 | WP_002816262.1 | CopY/TcrY family copper transport repressor | - |
| NVV61_RS13995 (NVV61_13995) | 20947..23193 | + | 2247 | WP_058831734.1 | heavy metal translocating P-type ATPase | - |
| NVV61_RS14000 (NVV61_14000) | 23330..26245 | - | 2916 | WP_003728469.1 | Tn3 family transposase Tn4430 | Transposase |
| NVV61_RS14005 (NVV61_14005) | 26249..26803 | - | 555 | WP_003728468.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NVV61_RS14010 (NVV61_14010) | 27083..27442 | + | 360 | WP_003728467.1 | Cd(II)-sensing metalloregulatory transcriptional repressor CadC | - |
| NVV61_RS14015 (NVV61_14015) | 27442..29577 | + | 2136 | WP_003728466.1 | putative cadmium-transporting ATPase | VF |
| NVV61_RS14020 (NVV61_14020) | 29955..30269 | + | 315 | WP_068995972.1 | hypothetical protein | - |
| NVV61_RS14025 (NVV61_14025) | 30294..30980 | + | 687 | WP_068995971.1 | hypothetical protein | VF |
| NVV61_RS14030 (NVV61_14030) | 31093..31329 | + | 237 | WP_068995970.1 | hypothetical protein | - |
| NVV61_RS14035 (NVV61_14035) | 31347..31631 | + | 285 | WP_068995969.1 | TrbC/VirB2 family protein | - |
| NVV61_RS14040 (NVV61_14040) | 31682..33826 | + | 2145 | WP_068995968.1 | hypothetical protein | - |
| NVV61_RS14045 (NVV61_14045) | 33869..34420 | + | 552 | WP_031642452.1 | hypothetical protein | - |
| NVV61_RS14050 (NVV61_14050) | 34424..36694 | + | 2271 | WP_068995967.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NVV61_RS14055 (NVV61_14055) | 36713..37393 | - | 681 | WP_002389568.1 | IS6 family transposase IS1216E | Transposase |
| NVV61_RS14060 (NVV61_14060) | 37469..37825 | - | 357 | Protein_34 | IS6 family transposase IS1216E | Transposase |
| NVV61_RS14065 (NVV61_14065) | 38017..39381 | + | 1365 | WP_003728481.1 | FAD-dependent oxidoreductase | - |
| NVV61_RS14070 (NVV61_14070) | 39627..40496 | - | 870 | WP_003728480.1 | glycine betaine ABC transporter substrate-binding protein | - |
| NVV61_RS14075 (NVV61_14075) | 40617..40856 | + | 240 | WP_003728479.1 | DUF6339 family protein | - |
| NVV61_RS14080 (NVV61_14080) | 40805..41176 | + | 372 | WP_003728478.1 | DUF6339 family protein | - |
| NVV61_RS14085 (NVV61_14085) | 41406..42131 | + | 726 | WP_245394439.1 | ISLre2 family transposase ISAot1 | Transposase |
| NVV61_RS14090 (NVV61_14090) | 42594..44477 | + | 1884 | Protein_40 | cation-translocating P-type ATPase | - |
| NVV61_RS14095 (NVV61_14095) | 44548..45099 | - | 552 | Protein_41 | CadD family cadmium resistance transporter | - |
| NVV61_RS14100 (NVV61_14100) | 45279..45960 | - | 682 | Protein_42 | IS6 family transposase | - |
| NVV61_RS14105 (NVV61_14105) | 46022..46555 | + | 534 | WP_096816752.1 | site-specific integrase | - |
| NVV61_RS14110 (NVV61_14110) | 47099..47464 | + | 366 | WP_003131442.1 | hypothetical protein | Relaxase |
| NVV61_RS14115 (NVV61_14115) | 47443..48675 | + | 1233 | WP_068995964.1 | hypothetical protein | Relaxase |
| NVV61_RS14120 (NVV61_14120) | 48672..49295 | + | 624 | WP_068995963.1 | mobilization protein | - |
| NVV61_RS14125 (NVV61_14125) | 49312..49914 | + | 603 | WP_003131447.1 | Fic family protein | - |
| NVV61_RS14130 (NVV61_14130) | 50252..51409 | + | 1158 | WP_039115947.1 | RepB family plasmid replication initiator protein | - |
| NVV61_RS14135 (NVV61_14135) | 51409..52038 | + | 630 | WP_226319492.1 | DNA-binding protein | - |
| NVV61_RS14140 (NVV61_14140) | 52049..53437 | + | 1389 | Protein_50 | DEAD/DEAH box helicase family protein | - |
| NVV61_RS14145 (NVV61_14145) | 53492..54172 | - | 681 | WP_005875647.1 | IS6 family transposase ISEnfa1 | Transposase |
| NVV61_RS14150 (NVV61_14150) | 54236..54439 | + | 204 | WP_068995962.1 | hypothetical protein | - |
| NVV61_RS14155 (NVV61_14155) | 54665..55015 | - | 351 | WP_068995961.1 | DUF2178 domain-containing protein | - |
| NVV61_RS14160 (NVV61_14160) | 55005..55244 | - | 240 | WP_068995960.1 | hypothetical protein | VF |
| NVV61_RS14165 (NVV61_14165) | 55691..55990 | + | 300 | WP_258210441.1 | hypothetical protein | - |
| NVV61_RS14170 (NVV61_14170) | 55992..56501 | + | 510 | WP_068995958.1 | hypothetical protein | VF |
| NVV61_RS14175 (NVV61_14175) | 56498..57058 | + | 561 | WP_068995957.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NVV61_RS14180 (NVV61_14180) | 57609..58760 | + | 1152 | WP_068995956.1 | RepB family plasmid replication initiator protein | - |
| NVV61_RS14185 (NVV61_14185) | 58771..58983 | + | 213 | WP_068995955.1 | hypothetical protein | - |
| NVV61_RS14190 (NVV61_14190) | 58976..59511 | + | 536 | Protein_60 | helix-turn-helix domain-containing protein | - |
| NVV61_RS14195 (NVV61_14195) | 59502..59705 | + | 204 | WP_258210442.1 | hypothetical protein | - |
| NVV61_RS14200 (NVV61_14200) | 59827..60432 | + | 606 | WP_077316131.1 | ISNCY family transposase ISH7A | Transposase |
| NVV61_RS14205 (NVV61_14205) | 60576..60920 | + | 345 | WP_002375364.1 | PadR family transcriptional regulator | - |
| NVV61_RS14210 (NVV61_14210) | 60910..61566 | + | 657 | WP_258210443.1 | DUF1129 domain-containing protein | - |
| NVV61_RS14215 (NVV61_14215) | 61836..62422 | + | 587 | Protein_65 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NVV61_RS14220 (NVV61_14220) | 62403..62729 | + | 327 | WP_068995953.1 | hypothetical protein | - |
| NVV61_RS14225 (NVV61_14225) | 62810..63490 | + | 681 | WP_176714219.1 | IS6 family transposase ISEnfa1 | Transposase |
| NVV61_RS14230 (NVV61_14230) | 63725..63946 | + | 222 | WP_068995951.1 | DUF6290 family protein | Antitoxin Detail |
| NVV61_RS14235 (NVV61_14235) | 63943..64218 | + | 276 | WP_068995950.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NVV61_RS14240 (NVV61_14240) | 64228..64419 | + | 192 | WP_226325631.1 | hypothetical protein | - |
| NVV61_RS14245 (NVV61_14245) | 64453..66357 | + | 1905 | WP_070232215.1 | hypothetical protein | - |
| NVV61_RS14250 (NVV61_14250) | 66373..66645 | + | 273 | WP_068995947.1 | DUF5592 family protein | - |
| NVV61_RS14255 (NVV61_14255) | 66647..67186 | + | 540 | WP_077316130.1 | hypothetical protein | - |
| NVV61_RS14260 (NVV61_14260) | 67183..69141 | + | 1959 | WP_187983845.1 | ATP-binding protein | - |
| NVV61_RS14265 (NVV61_14265) | 69142..70218 | + | 1077 | WP_077316128.1 | M23 family metallopeptidase | - |
| NVV61_RS14270 (NVV61_14270) | 70237..70839 | + | 603 | WP_068995944.1 | hypothetical protein | - |
| NVV61_RS14275 (NVV61_14275) | 70839..71624 | + | 786 | WP_077316127.1 | hypothetical protein | - |
| NVV61_RS14280 (NVV61_14280) | 71642..72772 | + | 1131 | WP_258210444.1 | hypothetical protein | - |
| NVV61_RS14285 (NVV61_14285) | 72823..73083 | + | 261 | WP_242225557.1 | PcfJ domain-containing protein | - |
| NVV61_RS14290 (NVV61_14290) | 73256..73561 | + | 306 | WP_077316125.1 | hypothetical protein | - |
| NVV61_RS14295 (NVV61_14295) | 73530..73937 | + | 408 | WP_068995940.1 | hypothetical protein | - |
| NVV61_RS14300 (NVV61_14300) | 73955..75301 | + | 1347 | WP_077316124.1 | hypothetical protein | Relaxase |
| NVV61_RS14305 (NVV61_14305) | 75303..75770 | + | 468 | WP_077316123.1 | CPBP family intramembrane metalloprotease | - |
| NVV61_RS14310 (NVV61_14310) | 75797..76162 | + | 366 | WP_070232219.1 | hypothetical protein | - |
| NVV61_RS14315 (NVV61_14315) | 76184..78325 | + | 2142 | WP_077316122.1 | type IA DNA topoisomerase | - |
| NVV61_RS14320 (NVV61_14320) | 78377..78577 | + | 201 | WP_068995935.1 | hypothetical protein | - |
| NVV61_RS14325 (NVV61_14325) | 78597..79679 | + | 1083 | WP_077316121.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| NVV61_RS14330 (NVV61_14330) | 79771..81249 | + | 1479 | WP_077316120.1 | toprim domain-containing protein | - |
| NVV61_RS14335 (NVV61_14335) | 81506..81778 | + | 273 | WP_068995931.1 | hypothetical protein | - |
| NVV61_RS14340 (NVV61_14340) | 82021..82302 | + | 282 | Protein_90 | hypothetical protein | VF |
| NVV61_RS14345 (NVV61_14345) | 82421..82825 | + | 405 | WP_258210445.1 | hypothetical protein | - |
| NVV61_RS14350 (NVV61_14350) | 83442..84047 | + | 606 | WP_068995980.1 | Tyrosine recombinase XerD | VF |
| NVV61_RS14355 (NVV61_14355) | 84188..84577 | + | 390 | WP_068995979.1 | hypothetical protein | - |
| NVV61_RS14360 (NVV61_14360) | 84702..84962 | + | 261 | WP_226319491.1 | YolD-like family protein | - |
| NVV61_RS14365 (NVV61_14365) | 84968..85315 | + | 348 | WP_068995978.1 | hypothetical protein | - |
| NVV61_RS14370 (NVV61_14370) | 85303..86583 | + | 1281 | WP_068995977.1 | Y-family DNA polymerase | - |
| NVV61_RS14375 (NVV61_14375) | 86634..86930 | - | 297 | WP_068995976.1 | replication and copy control-associated protein | - |
| NVV61_RS14380 (NVV61_14380) | 86908..87882 | - | 975 | WP_003728501.1 | ParA superfamily DNA segregation protein PrgP | - |
| NVV61_RS14385 (NVV61_14385) | 88622..90256 | + | 1635 | WP_003728500.1 | primase C-terminal domain-containing protein | - |
| NVV61_RS14390 (NVV61_14390) | 90531..91286 | + | 756 | WP_003728499.1 | hypothetical protein | - |
| NVV61_RS14395 (NVV61_14395) | 91320..91907 | - | 588 | WP_023553716.1 | IS3 family transposase IS-LL6 | Transposase |
| NVV61_RS14400 (NVV61_14400) | 91999..92754 | - | 756 | Protein_102 | IS21 family transposase IS712 | Transposase |
| NVV61_RS14405 (NVV61_14405) | 92765..93991 | - | 1227 | WP_187984146.1 | IS21 family transposase IS712 | Transposase |
| NVV61_RS14410 (NVV61_14410) | 94161..94319 | + | 159 | Protein_104 | NlpC/P60 family protein | - |
| NVV61_RS14415 (NVV61_14415) | 94335..94571 | + | 237 | WP_003728495.1 | hypothetical protein | - |
| NVV61_RS14420 (NVV61_14420) | 94534..94923 | + | 390 | WP_003731844.1 | hypothetical protein | - |
| NVV61_RS14425 (NVV61_14425) | 94926..95843 | + | 918 | WP_003728493.1 | hypothetical protein | - |
| NVV61_RS14430 (NVV61_14430) | 96242..96481 | + | 240 | WP_011011016.1 | hypothetical protein | - |
| NVV61_RS14435 (NVV61_14435) | 96493..96933 | + | 441 | WP_011011015.1 | hypothetical protein | - |
| NVV61_RS14440 (NVV61_14440) | 96926..98266 | + | 1341 | WP_025370664.1 | hypothetical protein | Relaxase |
| NVV61_RS14445 (NVV61_14445) | 98277..98639 | + | 363 | WP_031641939.1 | hypothetical protein | - |
| NVV61_RS14450 (NVV61_14450) | 98659..99423 | + | 765 | WP_025370662.1 | Fic family protein | - |
| NVV61_RS14455 (NVV61_14455) | 99537..100067 | + | 531 | WP_003728487.1 | hypothetical protein | - |
| NVV61_RS14460 (NVV61_14460) | 100103..100438 | - | 336 | WP_003728486.1 | helix-turn-helix transcriptional regulator | - |
| NVV61_RS14465 (NVV61_14465) | 100612..101010 | + | 399 | WP_011011011.1 | hypothetical protein | - |
| NVV61_RS14470 (NVV61_14470) | 101014..103197 | + | 2184 | WP_223196601.1 | class I SAM-dependent methyltransferase | - |
| NVV61_RS14475 (NVV61_14475) | 103369..104595 | + | 1227 | WP_227665703.1 | IS21 family transposase IS712 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|