MGE detailed information
MGE type: Genomic_island MGE length: 47430 bp
Accession: NZ_CP102500 Location: 3904807..3952236 Organism: Citrobacter youngae strain CF10 Replicon: chromosome
Accession: NZ_CP102500 Location: 3904807..3952236 Organism: Citrobacter youngae strain CF10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUG39_RS18845 (3901670) | 3901670..3902653 | - | 984 | WP_048212515.1 | AraC family transcriptional regulator | - |
| NUG39_RS18850 (3902769) | 3902769..3903674 | - | 906 | WP_048212516.1 | LysR substrate-binding domain-containing protein | - |
| NUG39_RS18855 (3903784) | 3903784..3904401 | + | 618 | WP_101742733.1 | LysE family translocator | - |
| NUG39_RS18860 (3904807) | 3904807..3905436 | - | 630 | WP_257748249.1 | DUF2913 family protein | - |
| NUG39_RS18865 (3905743) | 3905743..3907104 | - | 1362 | WP_061067362.1 | C4-dicarboxylate transporter DcuC | - |
| NUG39_RS18870 (3907101) | 3907101..3908357 | - | 1257 | WP_061067361.1 | peptidase T | - |
| NUG39_RS18875 (3909674) | 3909674..3909931 | + | 258 | WP_048212521.1 | YjhX family toxin | - |
| NUG39_RS18880 (3909942) | 3909942..3910688 | + | 747 | WP_061067359.1 | class I SAM-dependent methyltransferase | - |
| NUG39_RS18885 (3910745) | 3910745..3911314 | - | 570 | WP_048212523.1 | DJ-1/PfpI family protein | - |
| NUG39_RS18890 (3911712) | 3911712..3912824 | + | 1113 | WP_257748250.1 | agmatine deiminase family protein | - |
| NUG39_RS18895 (3912965) | 3912965..3913501 | + | 537 | WP_061067356.1 | tetratricopeptide repeat protein | - |
| NUG39_RS18900 (3913710) | 3913710..3915362 | + | 1653 | WP_257749325.1 | Sensor histidine kinase CitA | VF |
| NUG39_RS18905 (3915355) | 3915355..3916050 | + | 696 | WP_115600901.1 | Transcriptional regulatory protein DpiA | VF |
| NUG39_RS18910 (3916311) | 3916311..3917399 | + | 1089 | WP_061067354.1 | ABC transporter substrate-binding protein | - |
| NUG39_RS18915 (3917476) | 3917476..3919245 | + | 1770 | WP_005133551.1 | iron ABC transporter permease | - |
| NUG39_RS18920 (3919238) | 3919238..3920308 | + | 1071 | WP_101742737.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NUG39_RS18925 (3920657) | 3920657..3921025 | - | 369 | WP_257748251.1 | toxin | Toxin Detail |
| NUG39_RS18930 (3921046) | 3921046..3921363 | - | 318 | WP_257748253.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NUG39_RS18935 (3921382) | 3921382..3921603 | - | 222 | WP_257748254.1 | DUF987 domain-containing protein | - |
| NUG39_RS18940 (3921612) | 3921612..3922088 | - | 477 | WP_257748255.1 | RadC family protein | - |
| NUG39_RS18945 (3922104) | 3922104..3922562 | - | 459 | WP_257748256.1 | antirestriction protein | - |
| NUG39_RS18950 (3922648) | 3922648..3922884 | - | 237 | WP_257748257.1 | DUF905 domain-containing protein | - |
| NUG39_RS18955 (3922962) | 3922962..3923372 | - | 411 | WP_257748258.1 | hypothetical protein | - |
| NUG39_RS18960 (3923439) | 3923439..3923876 | - | 438 | WP_047028252.1 | hypothetical protein | - |
| NUG39_RS18965 (3923918) | 3923918..3924454 | - | 537 | WP_257748259.1 | DUF4339 domain-containing protein | - |
| NUG39_RS18970 (3924480) | 3924480..3925187 | - | 708 | WP_257748260.1 | DeoR family transcriptional regulator | - |
| NUG39_RS18975 (3925396) | 3925396..3926220 | - | 825 | WP_257748261.1 | DUF932 domain-containing protein | - |
| NUG39_RS18980 (3926314) | 3926314..3927177 | - | 864 | WP_257748262.1 | GTPase family protein | - |
| NUG39_RS18985 (3927276) | 3927276..3928187 | - | 912 | WP_257748263.1 | hypothetical protein | - |
| NUG39_RS18990 (3928624) | 3928624..3929211 | + | 588 | WP_257748264.1 | inovirus Gp2 family protein | - |
| NUG39_RS18995 (3929310) | 3929310..3929516 | + | 207 | WP_023233126.1 | helix-turn-helix domain-containing protein | - |
| NUG39_RS19000 (3929619) | 3929619..3930194 | + | 576 | WP_057067453.1 | hypothetical protein | - |
| NUG39_RS19005 (3930263) | 3930263..3930466 | + | 204 | Protein_3729 | IS3 family transposase | - |
| NUG39_RS19010 (3931220) | 3931220..3932026 | + | 807 | WP_130942411.1 | hypothetical protein | - |
| NUG39_RS19015 (3932038) | 3932038..3932901 | + | 864 | WP_130945907.1 | hypothetical protein | - |
| NUG39_RS19020 (3933194) | 3933194..3933619 | - | 426 | WP_257748265.1 | glutaredoxin-dependent arsenate reductase | - |
| NUG39_RS19025 (3933632) | 3933632..3934921 | - | 1290 | WP_257748266.1 | arsenite efflux transporter membrane subunit ArsB | - |
| NUG39_RS19030 (3934969) | 3934969..3936720 | - | 1752 | WP_257748267.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| NUG39_RS19035 (3936738) | 3936738..3937100 | - | 363 | WP_257748268.1 | arsenite efflux transporter metallochaperone ArsD | - |
| NUG39_RS19040 (3937149) | 3937149..3937499 | - | 351 | WP_135409589.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| NUG39_RS19045 (3937695) | 3937695..3940403 | + | 2709 | WP_257748269.1 | hypothetical protein | - |
| NUG39_RS19050 (3940672) | 3940672..3943812 | - | 3141 | WP_257748270.1 | DEAD/DEAH box helicase | - |
| NUG39_RS19055 (3943809) | 3943809..3944618 | - | 810 | WP_038423320.1 | hypothetical protein | - |
| NUG39_RS19060 (3945044) | 3945044..3946155 | + | 1112 | WP_103848104.1 | IS3 family transposase | - |
| NUG39_RS19065 (3946167) | 3946167..3946706 | - | 540 | WP_257748271.1 | hypothetical protein | - |
| NUG39_RS19070 (3947009) | 3947009..3948205 | - | 1197 | WP_257748272.1 | Prophage integrase IntS ; Integrase | Integrase |
| NUG39_RS19080 (3948610) | 3948610..3948918 | - | 309 | WP_233606058.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| NUG39_RS19085 (3949267) | 3949267..3950715 | - | 1449 | WP_172742660.1 | hypothetical protein | VF |
| NUG39_RS19090 (3951057) | 3951057..3951530 | - | 474 | WP_121584245.1 | hypothetical protein | - |
| NUG39_RS19095 (3951505) | 3951505..3952236 | - | 732 | WP_061067348.1 | winged helix-turn-helix domain-containing protein | - |
| NUG39_RS19100 (3952381) | 3952381..3953076 | - | 696 | WP_043015294.1 | fimbria/pilus periplasmic chaperone | - |
| NUG39_RS19105 (3953073) | 3953073..3954689 | - | 1617 | WP_257748273.1 | fimbrial protein | - |
| NUG39_RS19110 (3954694) | 3954694..3957185 | - | 2492 | Protein_3749 | CS1-pili formation C-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|