MGE detailed information
MGE type: Genomic_island MGE length: 149616 bp
Accession: NZ_CP102384 Location: 3151980..3301595 Organism: Sphingopyxis sp. DBS4 Replicon: chromosome
Accession: NZ_CP102384 Location: 3151980..3301595 Organism: Sphingopyxis sp. DBS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP825_RS15085 | 3148409..3149629 | + | 1221 | WP_257545042.1 | methionine adenosyltransferase | - |
| NP825_RS15090 | 3149698..3150429 | + | 732 | WP_257545044.1 | tRNA (guanine(46)-N(7))-methyltransferase TrmB | - |
| NP825_RS15095 | 3150475..3151788 | + | 1314 | WP_231729164.1 | site-specific integrase | - |
| NP825_RS15100 | 3151980..3152633 | + | 654 | WP_161786582.1 | GntR family transcriptional regulator | - |
| NP825_RS15105 | 3152708..3153913 | - | 1206 | WP_037557658.1 | CaiB/BaiF CoA-transferase family protein | - |
| NP825_RS15110 | 3153972..3155057 | + | 1086 | WP_235211618.1 | DMT family transporter | - |
| NP825_RS15115 | 3155277..3156146 | + | 870 | WP_152567708.1 | IclR family transcriptional regulator | - |
| NP825_RS15120 | 3156219..3156752 | + | 534 | WP_058456271.1 | TIGR02444 family protein | - |
| NP825_RS15125 | 3156718..3157059 | - | 342 | WP_037557657.1 | cytochrome c | - |
| NP825_RS15130 | 3157083..3158543 | - | 1461 | WP_037557721.1 | FAD-binding oxidoreductase | - |
| NP825_RS15135 | 3158556..3158795 | - | 240 | WP_037557656.1 | non-oxidative hydroxyarylic acid decarboxylases subunit D | - |
| NP825_RS15140 | 3158792..3160270 | - | 1479 | WP_052182498.1 | non-oxidative hydroxyarylic acid decarboxylases subunit C | - |
| NP825_RS15145 | 3160270..3161730 | - | 1461 | WP_037557719.1 | aldehyde dehydrogenase family protein | - |
| NP825_RS15150 | 3161764..3163317 | - | 1554 | WP_037557655.1 | FAD-linked oxidase C-terminal domain-containing protein | - |
| NP825_RS15155 | 3163314..3163886 | - | 573 | WP_052182497.1 | hypothetical protein | - |
| NP825_RS15160 | 3163886..3164509 | - | 624 | WP_231732769.1 | UbiX family flavin prenyltransferase | - |
| NP825_RS15165 | 3164643..3165353 | - | 711 | WP_231732770.1 | aldolase/citrate lyase family protein | - |
| NP825_RS15170 | 3165415..3166215 | - | 801 | WP_037557653.1 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | - |
| NP825_RS15175 | 3166384..3167250 | + | 867 | WP_037557652.1 | alpha/beta hydrolase | - |
| NP825_RS15180 | 3167319..3167816 | - | 498 | WP_037557651.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| NP825_RS15185 | 3167813..3168988 | - | 1176 | WP_037557650.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| NP825_RS15190 | 3168985..3170001 | - | 1017 | WP_037557715.1 | dihydrodipicolinate synthase family protein | - |
| NP825_RS15195 | 3170175..3170960 | + | 786 | WP_037557649.1 | Short-chain reductase protein NovJ | VF |
| NP825_RS15200 | 3170972..3172204 | - | 1233 | WP_231732771.1 | FAD-dependent oxidoreductase | - |
| NP825_RS15205 | 3172216..3173721 | - | 1506 | WP_037557648.1 | aldehyde dehydrogenase family protein | - |
| NP825_RS15210 | 3173736..3174014 | - | 279 | WP_037557647.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| NP825_RS15215 | 3174020..3174226 | - | 207 | WP_037557646.1 | 2-hydroxymuconate tautomerase | - |
| NP825_RS15220 | 3174226..3174996 | - | 771 | WP_037557645.1 | fumarylacetoacetate hydrolase family protein | - |
| NP825_RS15225 | 3174993..3176036 | - | 1044 | WP_037557643.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| NP825_RS15230 | 3176033..3176968 | - | 936 | WP_037557641.1 | acetaldehyde dehydrogenase (acetylating) | - |
| NP825_RS15235 | 3176996..3177799 | - | 804 | WP_037557713.1 | fumarylacetoacetate hydrolase family protein | - |
| NP825_RS15240 | 3177802..3179313 | - | 1512 | WP_052182496.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| NP825_RS15245 | 3179314..3179700 | - | 387 | WP_231740077.1 | heme-binding protein | - |
| NP825_RS15250 | 3179749..3180672 | - | 924 | WP_037557638.1 | catechol 2,3-dioxygenase | - |
| NP825_RS15255 | 3180692..3181522 | - | 831 | WP_231732772.1 | alpha/beta hydrolase | - |
| NP825_RS15260 | 3181711..3182316 | - | 606 | WP_037557634.1 | glutathione transferase GstA | - |
| NP825_RS15265 | 3182389..3183345 | - | 957 | WP_037557633.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| NP825_RS15270 | 3183395..3183889 | - | 495 | WP_037557632.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| NP825_RS15275 | 3183886..3185298 | - | 1413 | WP_052182494.1 | Rieske 2Fe-2S domain-containing protein | - |
| NP825_RS15280 | 3185546..3186445 | + | 900 | WP_257545107.1 | biphenyl-2,3-diol 1,2-dioxygenase | - |
| NP825_RS15285 | 3186483..3186809 | + | 327 | WP_037557710.1 | non-heme iron oxygenase ferredoxin subunit | - |
| NP825_RS15290 | 3186814..3187302 | + | 489 | WP_037557630.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| NP825_RS15295 | 3187322..3188593 | + | 1272 | WP_052182493.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| NP825_RS15300 | 3188590..3189180 | + | 591 | WP_037557628.1 | 2-hydroxychromene-2-carboxylate isomerase | - |
| NP825_RS15305 | 3189205..3191394 | + | 2190 | WP_231733416.1 | Vitamin B12 transporter BtuB | VF |
| NP825_RS15310 | 3191555..3193180 | + | 1626 | WP_197411510.1 | long-chain fatty acid--CoA ligase | - |
| NP825_RS15315 | 3193244..3193912 | - | 669 | WP_161786581.1 | TetR/AcrR family transcriptional regulator | - |
| NP825_RS15320 | 3194067..3194849 | - | 783 | WP_197411509.1 | (S)-1-Phenylethanol dehydrogenase | VF |
| NP825_RS15325 | 3194917..3195618 | - | 702 | WP_037557627.1 | class II aldolase/adducin family protein | - |
| NP825_RS15330 | 3195602..3196612 | - | 1011 | WP_052182491.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| NP825_RS15335 | 3196609..3197157 | - | 549 | WP_052182490.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| NP825_RS15340 | 3197159..3198607 | - | 1449 | WP_197411508.1 | Rieske 2Fe-2S domain-containing protein | - |
| NP825_RS15345 | 3198614..3199990 | - | 1377 | WP_197411507.1 | Sialic acid transporter NanT | VF |
| NP825_RS15350 | 3200011..3201468 | - | 1458 | WP_037557626.1 | aldehyde dehydrogenase family protein | - |
| NP825_RS15355 | 3201519..3203723 | - | 2205 | WP_081933247.1 | Vitamin B12 transporter BtuB | VF |
| NP825_RS15360 | 3203781..3204275 | - | 495 | WP_037557625.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| NP825_RS15365 | 3204272..3205462 | - | 1191 | WP_037557624.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| NP825_RS15370 | 3205555..3206412 | - | 858 | WP_037557623.1 | VOC family protein | - |
| NP825_RS15375 | 3206409..3207269 | - | 861 | WP_052182489.1 | hypothetical protein | - |
| NP825_RS15380 | 3208088..3208315 | - | 228 | WP_037557622.1 | hypothetical protein | - |
| NP825_RS15385 | 3208312..3208581 | - | 270 | WP_058539116.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NP825_RS15390 | 3208656..3209531 | + | 876 | WP_037557620.1 | alpha/beta hydrolase | - |
| NP825_RS15395 | 3209528..3209941 | + | 414 | WP_037557619.1 | hotdog fold thioesterase | - |
| NP825_RS15400 | 3210331..3211569 | - | 1239 | WP_058539115.1 | serine hydrolase domain-containing protein | - |
| NP825_RS15405 | 3211629..3213176 | - | 1548 | WP_037557617.1 | carboxylesterase family protein | - |
| NP825_RS15410 | 3213232..3215334 | - | 2103 | WP_161786579.1 | Vitamin B12 transporter BtuB | VF |
| NP825_RS15415 | 3215577..3216881 | - | 1305 | WP_037557615.1 | hypothetical protein | - |
| NP825_RS15420 | 3216878..3217555 | - | 678 | WP_197411506.1 | GntR family transcriptional regulator | - |
| NP825_RS15425 | 3217752..3218765 | + | 1014 | WP_037557614.1 | serine hydrolase domain-containing protein | - |
| NP825_RS15430 | 3219243..3220595 | + | 1353 | WP_231732773.1 | AMP-binding protein | - |
| NP825_RS15435 | 3220763..3221440 | + | 678 | WP_037557613.1 | TetR/AcrR family transcriptional regulator | - |
| NP825_RS15440 | 3221500..3222111 | - | 612 | WP_058801017.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| NP825_RS15445 | 3222108..3223016 | - | 909 | WP_037557611.1 | MlaD family protein | - |
| NP825_RS15450 | 3223016..3223753 | - | 738 | WP_257545149.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| NP825_RS15455 | 3223780..3224928 | - | 1149 | WP_161786578.1 | ABC transporter permease | - |
| NP825_RS15460 | 3225236..3226699 | - | 1464 | WP_037557608.1 | Outer membrane protein OprM | VF |
| NP825_RS15465 | 3226707..3228278 | - | 1572 | WP_137752007.1 | MDR family MFS transporter | - |
| NP825_RS15470 | 3228275..3229402 | - | 1128 | WP_037557697.1 | Colistin resistance protein EmrA | VF |
| NP825_RS15475 | 3229534..3230022 | + | 489 | WP_052182484.1 | MarR family transcriptional regulator | - |
| NP825_RS15480 | 3230028..3231617 | + | 1590 | WP_037557607.1 | AarF/UbiB family protein | - |
| NP825_RS15485 | 3231681..3232451 | + | 771 | WP_037557695.1 | NUDIX domain-containing protein | - |
| NP825_RS15490 | 3232623..3232979 | - | 357 | WP_231729244.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| NP825_RS15495 | 3232980..3234242 | - | 1263 | WP_037557605.1 | cytochrome P450 | - |
| NP825_RS15500 | 3234429..3235169 | + | 741 | WP_037557604.1 | FCD domain-containing protein | - |
| NP825_RS15505 | 3235212..3236354 | + | 1143 | WP_037557602.1 | nitronate monooxygenase | - |
| NP825_RS15510 | 3236380..3237570 | + | 1191 | WP_037557601.1 | transporter | - |
| NP825_RS15515 | 3237567..3238028 | + | 462 | WP_037557599.1 | OB-fold domain-containing protein | - |
| NP825_RS15520 | 3238036..3239286 | + | 1251 | WP_037557597.1 | acyl-CoA dehydrogenase family protein | - |
| NP825_RS15525 | 3239286..3240377 | + | 1092 | WP_037557595.1 | acyl-CoA dehydrogenase family protein | - |
| NP825_RS15530 | 3240435..3242048 | + | 1614 | WP_037557593.1 | acyl-CoA synthetase | - |
| NP825_RS15535 | 3242045..3243682 | + | 1638 | WP_052182483.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| NP825_RS15540 | 3243679..3244656 | + | 978 | WP_037557592.1 | alpha/beta hydrolase | - |
| NP825_RS15545 | 3245327..3248263 | + | 2937 | WP_137752008.1 | TonB-dependent receptor | - |
| NP825_RS15550 | 3248663..3248896 | - | 234 | WP_152567707.1 | hypothetical protein | - |
| NP825_RS15555 | 3249088..3250122 | - | 1035 | WP_161786577.1 | VacJ family lipoprotein | - |
| NP825_RS15560 | 3251053..3251865 | + | 813 | WP_037557590.1 | alpha/beta hydrolase | - |
| NP825_RS15565 | 3252222..3252443 | - | 222 | WP_037557589.1 | DUF2274 domain-containing protein | - |
| NP825_RS15570 | 3252440..3253633 | - | 1194 | WP_231732775.1 | hypothetical protein | VF |
| NP825_RS15575 | 3253669..3254523 | - | 855 | WP_081933240.1 | P-type conjugative transfer protein TrbG | - |
| NP825_RS15580 | 3254520..3255203 | - | 684 | WP_037557588.1 | conjugal transfer protein TrbF | - |
| NP825_RS15585 | 3255208..3256488 | - | 1281 | WP_037557587.1 | P-type conjugative transfer protein TrbL | - |
| NP825_RS15590 | 3256493..3256735 | - | 243 | WP_037557586.1 | putative entry exclusion protein TrbK-alt | - |
| NP825_RS15595 | 3256737..3257453 | - | 717 | WP_037557585.1 | P-type conjugative transfer protein TrbJ | - |
| NP825_RS15600 | 3257450..3259903 | - | 2454 | WP_037557584.1 | conjugal transfer protein TrbE | - |
| NP825_RS15605 | 3259900..3260169 | - | 270 | WP_037557583.1 | VirB3 family type IV secretion system protein | - |
| NP825_RS15610 | 3260169..3260501 | - | 333 | WP_037557582.1 | TrbC/VirB2 family protein | - |
| NP825_RS15615 | 3260498..3261481 | - | 984 | WP_037557689.1 | hypothetical protein | VF |
| NP825_RS15620 | 3261690..3262205 | + | 516 | WP_081933239.1 | hypothetical protein | VF |
| NP825_RS15625 | 3262265..3262597 | + | 333 | WP_037557580.1 | hypothetical protein | - |
| NP825_RS15630 | 3262639..3263112 | + | 474 | WP_037557579.1 | hypothetical protein | - |
| NP825_RS15635 | 3263250..3264050 | + | 801 | WP_197412336.1 | JAB domain-containing protein | - |
| NP825_RS15640 | 3264026..3264463 | - | 438 | WP_037557578.1 | hypothetical protein | - |
| NP825_RS15645 | 3264460..3266472 | - | 2013 | WP_037557577.1 | Conjugal transfer protein TraG | VF |
| NP825_RS15650 | 3266499..3268244 | - | 1746 | WP_037557686.1 | DUF3363 domain-containing protein | - |
| NP825_RS15655 | 3268464..3269090 | - | 627 | WP_081933254.1 | lytic transglycosylase domain-containing protein | - |
| NP825_RS15660 | 3269175..3269507 | - | 333 | WP_037557576.1 | DUF736 domain-containing protein | - |
| NP825_RS15665 | 3269504..3270091 | - | 588 | WP_037557575.1 | S26 family signal peptidase | - |
| NP825_RS15670 | 3270088..3270606 | - | 519 | WP_037557683.1 | DUF2840 domain-containing protein | - |
| NP825_RS15675 | 3270633..3270875 | - | 243 | WP_037557574.1 | helix-turn-helix domain-containing protein | - |
| NP825_RS15680 | 3270978..3271505 | - | 528 | WP_052182480.1 | DUF2285 domain-containing protein | - |
| NP825_RS15685 | 3271468..3271755 | - | 288 | WP_197411505.1 | DUF6499 domain-containing protein | - |
| NP825_RS15690 | 3271878..3272192 | - | 315 | WP_037557681.1 | DUF736 domain-containing protein | - |
| NP825_RS15695 | 3272502..3272933 | - | 432 | WP_058539111.1 | hypothetical protein | - |
| NP825_RS15700 | 3273057..3273221 | - | 165 | WP_167919412.1 | hypothetical protein | - |
| NP825_RS15705 | 3273694..3274014 | - | 321 | WP_037557208.1 | DUF736 family protein | - |
| NP825_RS15710 | 3274271..3274702 | - | 432 | WP_037557225.1 | hypothetical protein | - |
| NP825_RS15715 | 3275405..3275611 | + | 207 | WP_037557209.1 | hypothetical protein | - |
| NP825_RS15720 | 3275682..3276851 | - | 1170 | WP_037557210.1 | three-Cys-motif partner protein TcmP | - |
| NP825_RS15725 | 3276852..3277589 | - | 738 | WP_037557212.1 | phage Gp37/Gp68 family protein | - |
| NP825_RS15730 | 3277886..3278557 | + | 672 | WP_037557226.1 | DUF6088 family protein | - |
| NP825_RS15735 | 3278554..3279594 | + | 1041 | WP_052182450.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NP825_RS15740 | 3279591..3279983 | + | 393 | WP_137752010.1 | hypothetical protein | - |
| NP825_RS15745 | 3280002..3281681 | + | 1680 | WP_052182451.1 | hypothetical protein | - |
| NP825_RS15750 | 3281655..3282563 | - | 909 | WP_081933209.1 | ThiF family adenylyltransferase | - |
| NP825_RS15755 | 3282560..3283069 | - | 510 | WP_037557217.1 | hypothetical protein | - |
| NP825_RS15760 | 3283066..3283395 | - | 330 | WP_037557218.1 | hypothetical protein | - |
| NP825_RS15765 | 3283392..3284051 | - | 660 | WP_052182452.1 | multiubiquitin domain-containing protein | - |
| NP825_RS15770 | 3284189..3284539 | + | 351 | WP_037557219.1 | helix-turn-helix transcriptional regulator | - |
| NP825_RS15775 | 3284612..3286261 | - | 1650 | WP_037557220.1 | hypothetical protein | - |
| NP825_RS15780 | 3286261..3287220 | - | 960 | WP_257545233.1 | DUF2971 domain-containing protein | - |
| NP825_RS15785 | 3287257..3287601 | - | 345 | WP_197411479.1 | DMT family transporter | - |
| NP825_RS15790 | 3287611..3288540 | - | 930 | WP_037557222.1 | HEPN domain-containing protein | - |
| NP825_RS15795 | 3288603..3289472 | - | 870 | WP_257551493.1 | DUF2493 domain-containing protein | - |
| NP825_RS15800 | 3289460..3290920 | - | 1461 | Protein_3112 | ParB N-terminal domain-containing protein | - |
| NP825_RS15805 | 3291045..3291446 | - | 402 | WP_037556205.1 | DUF2958 domain-containing protein | - |
| NP825_RS15810 | 3291681..3291872 | + | 192 | WP_037556207.1 | hypothetical protein | - |
| NP825_RS15815 | 3291874..3292203 | + | 330 | WP_037556209.1 | hypothetical protein | - |
| NP825_RS15820 | 3292215..3292727 | + | 513 | WP_037556211.1 | hypothetical protein | - |
| NP825_RS15825 | 3292756..3293403 | + | 648 | WP_037556213.1 | SOS response-associated peptidase family protein | - |
| NP825_RS15830 | 3293426..3293551 | - | 126 | WP_257545241.1 | hypothetical protein | - |
| NP825_RS15835 | 3293681..3294298 | + | 618 | WP_037556215.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NP825_RS15840 | 3294291..3295196 | + | 906 | WP_037556217.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NP825_RS15845 | 3295475..3296230 | + | 756 | WP_231729159.1 | LuxR family transcriptional regulator | - |
| NP825_RS15850 | 3296330..3296908 | + | 579 | WP_257545246.1 | 4-coumaroyl-homoserine lactone synthase | VF |
| NP825_RS15855 | 3296892..3299039 | + | 2148 | WP_197412310.1 | prolyl oligopeptidase family serine peptidase | - |
| NP825_RS15860 | 3299042..3300586 | - | 1545 | WP_167919483.1 | asparagine synthetase B family protein | - |
| NP825_RS15865 | 3300763..3301407 | - | 645 | WP_082656048.1 | lasso peptide biosynthesis B2 protein | - |
| NP825_RS15870 | 3301464..3301595 | - | 132 | WP_257545256.1 | hypothetical protein | - |
| NP825_RS15875 | 3302459..3303478 | - | 1020 | WP_257545258.1 | AraC family transcriptional regulator | - |
| NP825_RS15880 | 3303590..3304567 | + | 978 | WP_257545260.1 | quinone oxidoreductase | - |
| NP825_RS15885 | 3304580..3305428 | + | 849 | WP_257545262.1 | TauD/TfdA family dioxygenase | - |
| NP825_RS15890 | 3305450..3306514 | + | 1065 | WP_257545264.1 | 3-keto-5-aminohexanoate cleavage protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|