MGE detailed information
MGE type: Genomic_island MGE length: 47291 bp
Accession: NZ_CP102380 Location: 234024..281314 Organism: Escherichia coli strain BM28 Replicon: chromosome
Accession: NZ_CP102380 Location: 234024..281314 Organism: Escherichia coli strain BM28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NR349_RS01045 (229165) | 229165..229968 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| NR349_RS01050 (229965) | 229965..230879 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| NR349_RS01055 (231120) | 231120..231920 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NR349_RS01060 (231951) | 231951..232547 | + | 597 | Protein_205 | methyltransferase domain-containing protein | - |
| NR349_RS01065 (232595) | 232595..233952 | - | 1358 | Protein_206 | murein transglycosylase D | - |
| NR349_RS01070 (234024) | 234024..234779 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| NR349_RS01075 (234813) | 234813..235535 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| NR349_RS01080 (235532) | 235532..235999 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| NR349_RS01085 (236064) | 236064..236795 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| NR349_RS01095 (237332) | 237332..238117 | + | 786 | WP_001086141.1 | lipoprotein | - |
| NR349_RS01100 (238254) | 238254..238733 | - | 480 | WP_001236645.1 | protein YkfM | - |
| NR349_RS01105 (238743) | 238743..239099 | - | 357 | Protein_213 | hypothetical protein | - |
| NR349_RS01110 (239097) | 239097..239375 | + | 279 | Protein_214 | ISAs1 family transposase | - |
| NR349_RS01115 (239416) | 239416..240186 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| NR349_RS01120 (240367) | 240367..240813 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NR349_RS01125 (240856) | 240856..243299 | - | 2444 | Protein_217 | Acyl-coenzyme A dehydrogenase | VF |
| NR349_RS01130 (243539) | 243539..244117 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NR349_RS01135 (244323) | 244323..245090 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NR349_RS01140 (245061) | 245061..245801 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NR349_RS01145 (245957) | 245957..246235 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NR349_RS01150 (246238) | 246238..246498 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NR349_RS01155 (246708) | 246708..247457 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| NR349_RS01160 (247633) | 247633..248130 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NR349_RS01165 (248354) | 248354..250066 | - | 1713 | Protein_225 | Flagellar biosynthesis protein FlhA | VF |
| NR349_RS01170 (250038) | 250038..250823 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NR349_RS01175 (250894) | 250894..252114 | + | 1221 | WP_262515329.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| NR349_RS01180 (252490) | 252490..253701 | + | 1212 | WP_000107627.1 | 3-(3-hydroxy-phenyl)propionate transporter | - |
| NR349_RS01185 (253803) | 253803..254342 | + | 540 | WP_001096705.1 | DUF2058 domain-containing protein | - |
| NR349_RS01190 (254566) | 254566..255399 | - | 834 | WP_000419081.1 | S-formylglutathione hydrolase | - |
| NR349_RS01195 (255493) | 255493..256602 | - | 1110 | WP_000842106.1 | S-(hydroxymethyl)glutathione dehydrogenase | ARG |
| NR349_RS01200 (256637) | 256637..256912 | - | 276 | WP_001141271.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| NR349_RS01205 (257098) | 257098..257871 | - | 774 | WP_000596084.1 | YaiO family outer membrane beta-barrel protein | - |
| NR349_RS01210 (257873) | 257873..258316 | - | 444 | WP_000012218.1 | transferase | - |
| NR349_RS01215 (258380) | 258380..259608 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| NR349_RS01220 (259617) | 259617..259880 | - | 264 | Protein_236 | acetyltransferase | - |
| NR349_RS01225 (259768) | 259768..260964 | - | 1197 | WP_000860444.1 | glycosyltransferase family 2 protein | - |
| NR349_RS01230 (260974) | 260974..261645 | - | 672 | Protein_238 | PIG-L family deacetylase | - |
| NR349_RS01235 (262261) | 262261..263223 | + | 963 | WP_262515362.1 | taurine ABC transporter substrate-binding protein | - |
| NR349_RS01240 (263236) | 263236..264003 | + | 768 | WP_000939375.1 | Taurine import ATP-binding protein TauB | VF |
| NR349_RS01245 (264000) | 264000..264827 | + | 828 | WP_000114620.1 | taurine ABC transporter permease TauC | - |
| NR349_RS01250 (264824) | 264824..265675 | + | 852 | WP_000004027.1 | taurine dioxygenase | - |
| NR349_RS01255 (265782) | 265782..266756 | - | 975 | WP_001295337.1 | porphobilinogen synthase | - |
| NR349_RS01260 (267280) | 267280..268806 | + | 1527 | Protein_244 | outer membrane autotransporter barrel domain-containing protein | - |
| NR349_RS01270 (270002) | 270002..271450 | + | 1449 | Protein_246 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| NR349_RS01275 (271554) | 271554..272762 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| NR349_RS01280 (272778) | 272778..272897 | - | 120 | Protein_248 | LysR family transcriptional regulator | - |
| NR349_RS01285 (273128) | 273128..274333 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| NR349_RS01290 (274777) | 274777..275097 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| NR349_RS01295 (275090) | 275090..275476 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| NR349_RS01300 (275484) | 275484..276170 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| NR349_RS01305 (276148) | 276148..276771 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| NR349_RS01310 (276853) | 276853..278058 | + | 1206 | WP_001089072.1 | Tetracycline resistance protein, class B | ARG |
| NR349_RS01315 (278171) | 278171..278764 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| NR349_RS01320 (278852) | 278852..279268 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| NR349_RS01325 (279278) | 279278..280486 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| NR349_RS01330 (280691) | 280691..281314 | + | 624 | WP_001295335.1 | hydrogen peroxide resistance inhibitor IprA | - |
| NR349_RS01335 (281315) | 281315..282472 | - | 1158 | WP_000830741.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| NR349_RS01340 (282824) | 282824..284044 | + | 1221 | WP_001301663.1 | peptide antibiotic transporter SbmA | - |
| NR349_RS01345 (284057) | 284057..285151 | + | 1095 | WP_000092067.1 | surface-exposed outer membrane lipoprotein YaiW | - |
| NR349_RS01350 (285210) | 285210..285518 | - | 309 | WP_000763151.1 | YaiY family protein | - |
| NR349_RS01355 (285778) | 285778..285990 | + | 213 | WP_001295334.1 | DUF2754 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|