MGE detailed information
MGE type: Genomic_island MGE length: 47291 bp
Accession: NZ_CP102379 Location: 234023..281313 Organism: Escherichia coli strain BM28 lysU Replicon: chromosome
Accession: NZ_CP102379 Location: 234023..281313 Organism: Escherichia coli strain BM28 lysU Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NR350_RS01045 (229164) | 229164..229967 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| NR350_RS01050 (229964) | 229964..230878 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| NR350_RS01055 (231119) | 231119..231919 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NR350_RS01060 (231950) | 231950..232546 | + | 597 | Protein_205 | methyltransferase domain-containing protein | - |
| NR350_RS01065 (232594) | 232594..233951 | - | 1358 | Protein_206 | murein transglycosylase D | - |
| NR350_RS01070 (234023) | 234023..234778 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| NR350_RS01075 (234812) | 234812..235534 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| NR350_RS01080 (235531) | 235531..235998 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| NR350_RS01085 (236063) | 236063..236794 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| NR350_RS01095 (237331) | 237331..238116 | + | 786 | WP_001086141.1 | lipoprotein | - |
| NR350_RS01100 (238253) | 238253..238732 | - | 480 | WP_001236645.1 | protein YkfM | - |
| NR350_RS01105 (238742) | 238742..239098 | - | 357 | Protein_213 | hypothetical protein | - |
| NR350_RS01110 (239096) | 239096..239374 | + | 279 | Protein_214 | ISAs1 family transposase | - |
| NR350_RS01115 (239415) | 239415..240185 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| NR350_RS01120 (240366) | 240366..240812 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NR350_RS01125 (240855) | 240855..243298 | - | 2444 | Protein_217 | Acyl-coenzyme A dehydrogenase | VF |
| NR350_RS01130 (243538) | 243538..244116 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NR350_RS01135 (244322) | 244322..245089 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NR350_RS01140 (245060) | 245060..245800 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NR350_RS01145 (245956) | 245956..246234 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NR350_RS01150 (246237) | 246237..246497 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NR350_RS01155 (246707) | 246707..247456 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| NR350_RS01160 (247632) | 247632..248129 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NR350_RS01165 (248353) | 248353..250065 | - | 1713 | Protein_225 | Flagellar biosynthesis protein FlhA | VF |
| NR350_RS01170 (250037) | 250037..250822 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NR350_RS01175 (250893) | 250893..252113 | + | 1221 | WP_262515329.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| NR350_RS01180 (252489) | 252489..253700 | + | 1212 | WP_000107627.1 | 3-(3-hydroxy-phenyl)propionate transporter | - |
| NR350_RS01185 (253802) | 253802..254341 | + | 540 | WP_001096705.1 | DUF2058 domain-containing protein | - |
| NR350_RS01190 (254565) | 254565..255398 | - | 834 | WP_000419081.1 | S-formylglutathione hydrolase | - |
| NR350_RS01195 (255492) | 255492..256601 | - | 1110 | WP_000842106.1 | S-(hydroxymethyl)glutathione dehydrogenase | ARG |
| NR350_RS01200 (256636) | 256636..256911 | - | 276 | WP_001141271.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| NR350_RS01205 (257097) | 257097..257870 | - | 774 | WP_000596084.1 | YaiO family outer membrane beta-barrel protein | - |
| NR350_RS01210 (257872) | 257872..258315 | - | 444 | WP_000012218.1 | transferase | - |
| NR350_RS01215 (258379) | 258379..259607 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| NR350_RS01220 (259616) | 259616..259879 | - | 264 | Protein_236 | acetyltransferase | - |
| NR350_RS01225 (259767) | 259767..260963 | - | 1197 | WP_000860444.1 | glycosyltransferase family 2 protein | - |
| NR350_RS01230 (260973) | 260973..261644 | - | 672 | Protein_238 | PIG-L family deacetylase | - |
| NR350_RS01235 (262260) | 262260..263222 | + | 963 | WP_001018417.1 | taurine ABC transporter substrate-binding protein | - |
| NR350_RS01240 (263235) | 263235..264002 | + | 768 | WP_000939375.1 | Taurine import ATP-binding protein TauB | VF |
| NR350_RS01245 (263999) | 263999..264826 | + | 828 | WP_000114620.1 | taurine ABC transporter permease TauC | - |
| NR350_RS01250 (264823) | 264823..265674 | + | 852 | WP_000004027.1 | taurine dioxygenase | - |
| NR350_RS01255 (265781) | 265781..266755 | - | 975 | WP_001295337.1 | porphobilinogen synthase | - |
| NR350_RS01260 (267279) | 267279..268805 | + | 1527 | Protein_244 | outer membrane autotransporter barrel domain-containing protein | - |
| NR350_RS01270 (270001) | 270001..271449 | + | 1449 | Protein_246 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| NR350_RS01275 (271553) | 271553..272761 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| NR350_RS01280 (272777) | 272777..272896 | - | 120 | Protein_248 | LysR family transcriptional regulator | - |
| NR350_RS01285 (273127) | 273127..274332 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| NR350_RS01290 (274776) | 274776..275096 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| NR350_RS01295 (275089) | 275089..275475 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| NR350_RS01300 (275483) | 275483..276169 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| NR350_RS01305 (276147) | 276147..276770 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| NR350_RS01310 (276852) | 276852..278057 | + | 1206 | WP_001089072.1 | Tetracycline resistance protein, class B | ARG |
| NR350_RS01315 (278170) | 278170..278763 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| NR350_RS01320 (278851) | 278851..279267 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| NR350_RS01325 (279277) | 279277..280485 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| NR350_RS01330 (280690) | 280690..281313 | + | 624 | WP_001295335.1 | hydrogen peroxide resistance inhibitor IprA | - |
| NR350_RS01335 (281314) | 281314..282471 | - | 1158 | WP_000830741.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| NR350_RS01340 (282823) | 282823..284043 | + | 1221 | WP_001301663.1 | peptide antibiotic transporter SbmA | - |
| NR350_RS01345 (284056) | 284056..285150 | + | 1095 | WP_000092067.1 | surface-exposed outer membrane lipoprotein YaiW | - |
| NR350_RS01350 (285209) | 285209..285517 | - | 309 | WP_000763151.1 | YaiY family protein | - |
| NR350_RS01355 (285777) | 285777..285989 | + | 213 | WP_001295334.1 | DUF2754 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|