MGE detailed information
MGE type: Genomic_island MGE length: 13330 bp
Accession: NZ_CP102179 Location: 390007..403336 Organism: Pseudomonas canavaninivorans strain B21-020 Replicon: chromosome
Accession: NZ_CP102179 Location: 390007..403336 Organism: Pseudomonas canavaninivorans strain B21-020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY40_RS01705 (LOY40_01705) | 385163..386770 | - | 1608 | WP_258648718.1 | methyl-accepting chemotaxis protein | - |
| LOY40_RS01710 (LOY40_01710) | 386942..387880 | - | 939 | WP_258648719.1 | LysR family transcriptional regulator | - |
| LOY40_RS01715 (LOY40_01715) | 387996..388742 | + | 747 | WP_258648720.1 | SDR family oxidoreductase | - |
| LOY40_RS01720 (LOY40_01720) | 388952..390010 | - | 1059 | WP_258648721.1 | hypothetical protein | - |
| LOY40_RS01725 (LOY40_01725) | 390007..390357 | - | 351 | WP_258648722.1 | hypothetical protein | - |
| LOY40_RS01730 (LOY40_01730) | 390623..391246 | + | 624 | Protein_338 | BRCT domain-containing protein | - |
| LOY40_RS01735 (LOY40_01735) | 391627..392091 | - | 465 | WP_077432272.1 | hypothetical protein | - |
| LOY40_RS01740 (LOY40_01740) | 392084..392710 | - | 627 | Protein_340 | hypothetical protein | - |
| LOY40_RS01745 (LOY40_01745) | 393008..393670 | - | 663 | WP_077432273.1 | hypothetical protein | - |
| LOY40_RS01750 (LOY40_01750) | 393670..394545 | - | 876 | WP_077432274.1 | nucleotidyltransferase | - |
| LOY40_RS01755 (LOY40_01755) | 394722..394997 | - | 276 | WP_223538923.1 | hypothetical protein | - |
| LOY40_RS01760 (LOY40_01760) | 394994..395249 | - | 256 | Protein_344 | integrase | - |
| LOY40_RS01765 (LOY40_01765) | 396124..397446 | - | 1323 | WP_223538924.1 | Prophage integrase IntA ; Integrase | Integrase |
| LOY40_RS01775 (LOY40_01775) | 398116..399345 | - | 1230 | WP_258648723.1 | SAM-dependent methyltransferase | - |
| LOY40_RS01780 (LOY40_01780) | 399326..400015 | - | 690 | WP_030141498.1 | ABC transporter permease | - |
| LOY40_RS01785 (LOY40_01785) | 400012..400707 | - | 696 | WP_198797081.1 | ABC transporter permease | - |
| LOY40_RS01790 (LOY40_01790) | 400787..401542 | - | 756 | WP_030141496.1 | ABC transporter substrate-binding protein | - |
| LOY40_RS01795 (LOY40_01795) | 401556..402329 | - | 774 | WP_030141495.1 | Octopine permease ATP-binding protein P | VF |
| LOY40_RS01800 (LOY40_01800) | 402690..403106 | - | 417 | WP_249876528.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LOY40_RS01805 (LOY40_01805) | 403106..403336 | - | 231 | WP_030141493.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LOY40_RS01810 (LOY40_01810) | 403512..403961 | + | 450 | WP_258648724.1 | carboxypeptidase regulatory-like domain-containing protein | - |
| LOY40_RS01815 (LOY40_01815) | 403971..404417 | - | 447 | WP_030141491.1 | hypothetical protein | - |
| LOY40_RS01820 (LOY40_01820) | 404458..406692 | - | 2235 | WP_258648725.1 | ATP-binding protein | - |
| LOY40_RS01825 (LOY40_01825) | 406689..407294 | - | 606 | WP_258648726.1 | biliverdin-producing heme oxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|