MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 28518 bp
Accession: NZ_CP102175 Location: 5606830..5635347 Organism: Pseudomonas corrugata strain B21-061 Replicon: chromosome
Accession: NZ_CP102175 Location: 5606830..5635347 Organism: Pseudomonas corrugata strain B21-061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY65_RS24700 (LOY65_24705) | 5603896..5604966 | + | 1071 | WP_265075418.1 | site-specific integrase | - |
| LOY65_RS24705 (LOY65_24710) | 5605445..5606350 | + | 906 | WP_265075419.1 | hypothetical protein | - |
| LOY65_RS24710 (LOY65_24715) | 5606347..5607081 | + | 735 | WP_265075420.1 | P-type DNA transfer protein VirB5 | - |
| LOY65_RS24715 (LOY65_24720) | 5607092..5607526 | + | 435 | WP_265075421.1 | hypothetical protein | - |
| LOY65_RS24720 (LOY65_24725) | 5607523..5607780 | + | 258 | WP_265075422.1 | EexN family lipoprotein | - |
| LOY65_RS24725 (LOY65_24730) | 5607785..5608837 | + | 1053 | WP_265075423.1 | type IV secretion system protein | - |
| LOY65_RS24730 (LOY65_24735) | 5609119..5609313 | - | 195 | WP_265075424.1 | antitoxin VbhA family protein | - |
| LOY65_RS24735 (LOY65_24740) | 5609535..5610056 | + | 522 | WP_265075425.1 | hypothetical protein | - |
| LOY65_RS24740 (LOY65_24745) | 5610080..5610292 | + | 213 | WP_024777390.1 | hypothetical protein | - |
| LOY65_RS24745 (LOY65_24750) | 5610844..5611599 | - | 756 | WP_055137146.1 | IS21 family transposase ISPsy41 | Transposase |
| LOY65_RS24750 (LOY65_24755) | 5611620..5613134 | - | 1515 | WP_053192610.1 | IS21 family transposase ISPre4 | Transposase |
| LOY65_RS24755 (LOY65_24760) | 5613908..5614909 | - | 1002 | WP_265075426.1 | hypothetical protein | - |
| LOY65_RS24760 (LOY65_24765) | 5615131..5619177 | - | 4047 | WP_265075427.1 | hypothetical protein | - |
| LOY65_RS24765 (LOY65_24770) | 5619191..5619598 | - | 408 | WP_024779388.1 | DUF6375 family protein | - |
| LOY65_RS24770 (LOY65_24775) | 5619595..5620512 | - | 918 | WP_265075428.1 | radical SAM protein | - |
| LOY65_RS24775 (LOY65_24780) | 5620851..5621327 | + | 477 | WP_265075429.1 | hypothetical protein | - |
| LOY65_RS24780 (LOY65_24785) | 5621545..5621952 | + | 408 | WP_265075430.1 | hypothetical protein | - |
| LOY65_RS24785 (LOY65_24790) | 5622226..5625273 | - | 3048 | WP_265075431.1 | DEAD/DEAH box helicase | - |
| LOY65_RS24790 (LOY65_24795) | 5625278..5626111 | - | 834 | WP_265075432.1 | DUF1837 domain-containing protein | - |
| LOY65_RS24795 (LOY65_24800) | 5626643..5626954 | - | 312 | WP_024779393.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LOY65_RS24800 (LOY65_24805) | 5626947..5627312 | - | 366 | WP_055136377.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOY65_RS24805 (LOY65_24810) | 5627596..5629959 | + | 2364 | WP_265068324.1 | hypothetical protein | - |
| LOY65_RS24810 (LOY65_24815) | 5629996..5630457 | + | 462 | WP_024779396.1 | Lrp/AsnC family transcriptional regulator | - |
| LOY65_RS24815 (LOY65_24820) | 5630737..5632419 | + | 1683 | WP_024779397.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LOY65_RS24820 (LOY65_24825) | 5632446..5633240 | + | 795 | WP_055136378.1 | carbon-nitrogen hydrolase family protein | - |
| LOY65_RS24825 (LOY65_24830) | 5633296..5635728 | + | 2433 | WP_265075433.1 | pyrroloquinoline quinone biosynthesis protein PqqF | - |
| LOY65_RS24830 (LOY65_24835) | 5635886..5635960 | + | 75 | WP_003177660.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| LOY65_RS24835 (LOY65_24840) | 5636041..5636952 | + | 912 | WP_024779400.1 | pyrroloquinoline quinone biosynthesis protein PqqB | - |
| LOY65_RS24840 (LOY65_24845) | 5637147..5637899 | + | 753 | WP_024779401.1 | pyrroloquinoline-quinone synthase PqqC | - |
| LOY65_RS24845 (LOY65_24850) | 5637896..5638171 | + | 276 | WP_024779402.1 | pyrroloquinoline quinone biosynthesis peptide chaperone PqqD | - |
| LOY65_RS24850 (LOY65_24855) | 5638143..5639294 | + | 1152 | WP_024779403.1 | pyrroloquinoline quinone biosynthesis protein PqqE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|