MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61018 bp
Accession: NZ_CP102140 Location: 1019966..1080983 Organism: Streptococcus suis strain DNC49 Replicon: chromosome
Accession: NZ_CP102140 Location: 1019966..1080983 Organism: Streptococcus suis strain DNC49 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ94_RS05190 (NQZ94_05190) | 1015526..1016530 | - | 1005 | WP_002935036.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| NQZ94_RS05195 (NQZ94_05195) | 1016595..1017431 | - | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| NQZ94_RS05200 (NQZ94_05200) | 1017508..1018842 | - | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| NQZ94_RS05205 (NQZ94_05205) | 1019038..1019787 | - | 750 | WP_002935039.1 | HAD family hydrolase | - |
| NQZ94_RS05210 (NQZ94_05210) | 1019966..1021171 | - | 1206 | WP_024409315.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NQZ94_RS05215 (NQZ94_05215) | 1021174..1021422 | - | 249 | WP_029743105.1 | DUF3173 family protein | - |
| NQZ94_RS05220 (NQZ94_05220) | 1021692..1021916 | - | 225 | WP_003108992.1 | helix-turn-helix transcriptional regulator | - |
| NQZ94_RS05225 (NQZ94_05225) | 1022163..1023059 | - | 897 | WP_024409316.1 | aldose 1-epimerase family protein | - |
| NQZ94_RS05230 (NQZ94_05230) | 1023147..1024553 | - | 1407 | WP_024409317.1 | 6-phospho-beta-galactosidase | - |
| NQZ94_RS05235 (NQZ94_05235) | 1024619..1026322 | - | 1704 | WP_024409318.1 | lactose-specific PTS transporter subunit EIIC | - |
| NQZ94_RS05240 (NQZ94_05240) | 1026322..1026639 | - | 318 | WP_024409319.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| NQZ94_RS05245 (NQZ94_05245) | 1026667..1027647 | - | 981 | WP_029743106.1 | tagatose-bisphosphate aldolase | - |
| NQZ94_RS05250 (NQZ94_05250) | 1027650..1028582 | - | 933 | WP_024409321.1 | tagatose-6-phosphate kinase | - |
| NQZ94_RS05255 (NQZ94_05255) | 1028594..1029109 | - | 516 | WP_002936382.1 | galactose-6-phosphate isomerase subunit LacB | - |
| NQZ94_RS05260 (NQZ94_05260) | 1029143..1029568 | - | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| NQZ94_RS05265 (NQZ94_05265) | 1029806..1030756 | - | 951 | WP_024409322.1 | ROK family glucokinase | - |
| NQZ94_RS05270 (NQZ94_05270) | 1030936..1031697 | + | 762 | WP_024409323.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NQZ94_RS05275 (NQZ94_05275) | 1031746..1032114 | + | 369 | WP_239494053.1 | HAD family hydrolase | - |
| NQZ94_RS05280 (NQZ94_05280) | 1032417..1034282 | - | 1866 | WP_025310409.1 | SAG1250 family conjugative relaxase | - |
| NQZ94_RS05285 (NQZ94_05285) | 1034269..1034634 | - | 366 | WP_024409325.1 | MobC family plasmid mobilization relaxosome protein | - |
| NQZ94_RS05290 (NQZ94_05290) | 1034644..1035003 | - | 360 | WP_024409326.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| NQZ94_RS05295 (NQZ94_05295) | 1035329..1035913 | - | 585 | WP_226960638.1 | hypothetical protein | - |
| NQZ94_RS05300 (NQZ94_05300) | 1035960..1037885 | - | 1926 | WP_257116278.1 | ATP-dependent helicase | - |
| NQZ94_RS05305 (NQZ94_05305) | 1037882..1039711 | - | 1830 | WP_024409329.1 | AAA family ATPase | - |
| NQZ94_RS05310 (NQZ94_05310) | 1039713..1040657 | - | 945 | WP_024409330.1 | IS30 family transposase IS1252 | Transposase |
| NQZ94_RS05315 (NQZ94_05315) | 1040742..1040951 | - | 210 | WP_024409331.1 | AAA family ATPase | - |
| NQZ94_RS05320 (NQZ94_05320) | 1040932..1041726 | - | 795 | WP_024409332.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| NQZ94_RS05325 (NQZ94_05325) | 1041726..1042202 | - | 477 | WP_024409333.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| NQZ94_RS05330 (NQZ94_05330) | 1042272..1042556 | - | 285 | WP_024409334.1 | hypothetical protein | - |
| NQZ94_RS05335 (NQZ94_05335) | 1042600..1042995 | - | 396 | WP_017285409.1 | DUF5945 family protein | - |
| NQZ94_RS05340 (NQZ94_05340) | 1042999..1043226 | - | 228 | WP_024409335.1 | DUF5965 family protein | - |
| NQZ94_RS05345 (NQZ94_05345) | 1043280..1044368 | - | 1089 | WP_024409336.1 | toprim domain-containing protein | - |
| NQZ94_RS05350 (NQZ94_05350) | 1044408..1045046 | - | 639 | WP_024409337.1 | hypothetical protein | - |
| NQZ94_RS05355 (NQZ94_05355) | 1045157..1045447 | - | 291 | WP_024409338.1 | DUF5966 family protein | - |
| NQZ94_RS05360 (NQZ94_05360) | 1045462..1045761 | - | 300 | WP_024382151.1 | DUF5962 family protein | - |
| NQZ94_RS05365 (NQZ94_05365) | 1045831..1046778 | - | 948 | WP_226960637.1 | helicase SNF2 | - |
| NQZ94_RS05370 (NQZ94_05370) | 1046783..1048503 | - | 1721 | Protein_1011 | IS607 family transposase ISTsi1 | Transposase |
| NQZ94_RS05375 (NQZ94_05375) | 1048557..1048748 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| NQZ94_RS05380 (NQZ94_05380) | 1048819..1049049 | - | 231 | WP_000659121.1 | PC4/YdbC family ssDNA-binding protein | - |
| NQZ94_RS05385 (NQZ94_05385) | 1049126..1049980 | - | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| NQZ94_RS05390 (NQZ94_05390) | 1049988..1050953 | - | 966 | WP_001145977.1 | MobV family relaxase | - |
| NQZ94_RS05395 (NQZ94_05395) | 1051472..1052503 | - | 1032 | WP_001170965.1 | AAA family ATPase | - |
| NQZ94_RS05400 (NQZ94_05400) | 1052657..1053130 | - | 474 | WP_000323521.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| NQZ94_RS05405 (NQZ94_05405) | 1053214..1053639 | - | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| NQZ94_RS05410 (NQZ94_05410) | 1053734..1054243 | - | 510 | WP_000872511.1 | hypothetical protein | VF |
| NQZ94_RS05415 (NQZ94_05415) | 1054733..1054903 | - | 171 | WP_223213393.1 | cysteine-rich KTR domain-containing protein | - |
| NQZ94_RS05420 (NQZ94_05420) | 1054958..1056877 | - | 1920 | WP_000691759.1 | tetracycline resistance ribosomal protection protein Tet(O) | VF |
| NQZ94_RS05425 (NQZ94_05425) | 1057244..1057618 | - | 375 | WP_001140406.1 | TnpV protein | - |
| NQZ94_RS05430 (NQZ94_05430) | 1057599..1063532 | - | 5934 | WP_024409341.1 | SNF2-related protein | - |
| NQZ94_RS05435 (NQZ94_05435) | 1063583..1064134 | - | 552 | WP_024409342.1 | hypothetical protein | - |
| NQZ94_RS05440 (NQZ94_05440) | 1064118..1064309 | - | 192 | WP_018165734.1 | thrombospondin type 3 repeat-containing protein | - |
| NQZ94_RS05445 (NQZ94_05445) | 1064310..1069214 | - | 4905 | WP_024409343.1 | hypothetical protein | VF |
| NQZ94_RS05450 (NQZ94_05450) | 1069456..1070049 | - | 594 | WP_024409344.1 | PBECR4 domain-containing protein | - |
| NQZ94_RS05455 (NQZ94_05455) | 1070294..1073098 | - | 2805 | WP_024409345.1 | phage tail tip lysozyme | - |
| NQZ94_RS05460 (NQZ94_05460) | 1073095..1075446 | - | 2352 | WP_032505216.1 | ATPase AAA | - |
| NQZ94_RS05465 (NQZ94_05465) | 1075403..1075756 | - | 354 | WP_001097593.1 | PrgI family protein | - |
| NQZ94_RS05470 (NQZ94_05470) | 1075819..1076673 | - | 855 | WP_024409347.1 | type IV secretion system protein | - |
| NQZ94_RS05475 (NQZ94_05475) | 1076690..1076932 | - | 243 | WP_024409348.1 | hypothetical protein | - |
| NQZ94_RS05480 (NQZ94_05480) | 1076950..1078770 | - | 1821 | WP_024409349.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NQZ94_RS05485 (NQZ94_05485) | 1078770..1079258 | - | 489 | WP_024409350.1 | hypothetical protein | - |
| NQZ94_RS05490 (NQZ94_05490) | 1079335..1079916 | - | 582 | WP_024409351.1 | CPBP family intramembrane metalloprotease | - |
| NQZ94_RS05495 (NQZ94_05495) | 1079919..1080152 | - | 234 | WP_024409352.1 | hypothetical protein | - |
| NQZ94_RS05500 (NQZ94_05500) | 1080162..1080545 | - | 384 | WP_024409353.1 | arsenate reductase | - |
| NQZ94_RS05505 (NQZ94_05505) | 1080555..1080983 | - | 429 | WP_024409354.1 | hypothetical protein | - |
| NQZ94_RS05510 (NQZ94_05510) | 1080967..1082322 | - | 1356 | WP_029743109.1 | DNA (cytosine-5-)-methyltransferase | - |
| NQZ94_RS05515 (NQZ94_05515) | 1082480..1083304 | - | 825 | WP_009909851.1 | replication initiator protein A | - |
| NQZ94_RS05520 (NQZ94_05520) | 1083301..1083474 | - | 174 | WP_006738653.1 | hypothetical protein | - |
| NQZ94_RS05525 (NQZ94_05525) | 1083734..1084099 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| NQZ94_RS05530 (NQZ94_05530) | 1084165..1084659 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|