MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112841 bp
Accession: NZ_CP102094 Location: 858891..971731 Organism: Streptococcus suis strain 12RC1 Replicon: chromosome
Accession: NZ_CP102094 Location: 858891..971731 Organism: Streptococcus suis strain 12RC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ84_RS04240 (NQZ84_04240) | 854275..855078 | + | 804 | WP_024399032.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| NQZ84_RS04245 (NQZ84_04245) | 855090..855848 | + | 759 | WP_002937614.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| NQZ84_RS04250 (NQZ84_04250) | 855877..856533 | + | 657 | WP_002937611.1 | phosphate signaling complex protein PhoU | - |
| NQZ84_RS04255 (NQZ84_04255) | 856699..857079 | + | 381 | WP_014637851.1 | hypothetical protein | - |
| NQZ84_RS04260 (NQZ84_04260) | 857274..857945 | + | 672 | WP_024385291.1 | response regulator transcription factor | - |
| NQZ84_RS04265 (NQZ84_04265) | 857938..859317 | + | 1380 | WP_257048524.1 | HAMP domain-containing sensor histidine kinase | - |
| NQZ84_RS04270 (NQZ84_04270) | 859418..860647 | + | 1230 | WP_044753111.1 | transglutaminase domain-containing protein | - |
| NQZ84_RS04275 (NQZ84_04275) | 860867..861115 | - | 249 | WP_012027069.1 | 30S ribosomal protein S20 | - |
| NQZ84_RS04280 (NQZ84_04280) | 861174..862094 | - | 921 | WP_002935283.1 | type I pantothenate kinase | - |
| NQZ84_RS04285 (NQZ84_04285) | 862203..862793 | + | 591 | WP_024376492.1 | class I SAM-dependent methyltransferase | - |
| NQZ84_RS04290 (NQZ84_04290) | 862790..864067 | + | 1278 | WP_044680727.1 | pyrimidine-nucleoside phosphorylase | - |
| NQZ84_RS04295 (NQZ84_04295) | 864083..864745 | + | 663 | WP_002935276.1 | deoxyribose-phosphate aldolase | - |
| NQZ84_RS04300 (NQZ84_04300) | 864732..865121 | + | 390 | WP_002940839.1 | cytidine deaminase | - |
| NQZ84_RS04305 (NQZ84_04305) | 865202..866269 | + | 1068 | WP_257048518.1 | BMP family protein | - |
| NQZ84_RS04310 (NQZ84_04310) | 866464..867999 | + | 1536 | WP_002935272.1 | Galactose/methyl galactoside import ATP-binding protein MglA | VF |
| NQZ84_RS04315 (NQZ84_04315) | 867992..869053 | + | 1062 | WP_044680726.1 | ABC transporter permease | - |
| NQZ84_RS04320 (NQZ84_04320) | 869055..870008 | + | 954 | WP_012775589.1 | ABC transporter permease | - |
| NQZ84_RS04325 (NQZ84_04325) | 870127..871383 | - | 1257 | WP_257079108.1 | ISL3 family transposase IS1193D | Transposase |
| NQZ84_RS04330 (NQZ84_04330) | 871697..872131 | + | 435 | WP_257047217.1 | dihydrofolate reductase family protein | - |
| NQZ84_RS04335 (NQZ84_04335) | 872132..872329 | + | 198 | WP_239027151.1 | dihydrofolate reductase family protein | - |
| NQZ84_RS04340 (NQZ84_04340) | 872372..873355 | - | 984 | WP_002940816.1 | L-lactate dehydrogenase | - |
| NQZ84_RS04345 (NQZ84_04345) | 873544..875988 | + | 2445 | WP_024383413.1 | DNA gyrase subunit A | - |
| NQZ84_RS04350 (NQZ84_04350) | 875995..876744 | + | 750 | WP_024385286.1 | Sortase A | VF |
| NQZ84_RS04355 (NQZ84_04355) | 876859..877539 | + | 681 | WP_002935253.1 | DNA repair protein RadC | - |
| NQZ84_RS04360 (NQZ84_04360) | 877536..878228 | - | 693 | WP_074391081.1 | Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD | VF |
| NQZ84_RS04365 (NQZ84_04365) | 878232..878870 | - | 639 | WP_002935251.1 | redox-sensing transcriptional repressor Rex | - |
| NQZ84_RS04370 (NQZ84_04370) | 879005..879208 | - | 204 | WP_002940737.1 | DUF4649 family protein | - |
| NQZ84_RS04375 (NQZ84_04375) | 879210..879554 | - | 345 | WP_002940732.1 | DUF1831 domain-containing protein | - |
| NQZ84_RS04380 (NQZ84_04380) | 879556..880671 | - | 1116 | WP_105243161.1 | cysteine desulfurase family protein | - |
| NQZ84_RS04385 (NQZ84_04385) | 880682..881659 | - | 978 | WP_257047227.1 | ribose-phosphate diphosphokinase | - |
| NQZ84_RS04390 (NQZ84_04390) | 881804..882370 | - | 567 | WP_015646779.1 | CYTH domain-containing protein | - |
| NQZ84_RS04395 (NQZ84_04395) | 882457..883128 | + | 672 | WP_002935242.1 | GTP pyrophosphokinase family protein | - |
| NQZ84_RS04400 (NQZ84_04400) | 883103..883930 | + | 828 | WP_032497578.1 | NAD kinase | - |
| NQZ84_RS04405 (NQZ84_04405) | 883930..884823 | + | 894 | WP_012027041.1 | RluA family pseudouridine synthase | - |
| NQZ84_RS04410 (NQZ84_04410) | 884841..885815 | + | 975 | WP_012775151.1 | phosphate acetyltransferase | - |
| NQZ84_RS04415 (NQZ84_04415) | 885817..887556 | + | 1740 | WP_257047230.1 | ABC transporter ATP-binding protein | - |
| NQZ84_RS04420 (NQZ84_04420) | 887543..889285 | + | 1743 | WP_257047232.1 | putative ABC transporter ATP-binding protein | VF |
| NQZ84_RS04425 (NQZ84_04425) | 889269..889661 | + | 393 | WP_029681487.1 | PaaI family thioesterase | - |
| NQZ84_RS04430 (NQZ84_04430) | 889951..891111 | + | 1161 | WP_024408798.1 | A/G-specific adenine glycosylase | - |
| NQZ84_RS04435 (NQZ84_04435) | 891774..892574 | - | 801 | WP_024383594.1 | XRE family transcriptional regulator | - |
| NQZ84_RS04440 (NQZ84_04440) | 892705..893175 | + | 471 | WP_024385761.1 | hypothetical protein | - |
| NQZ84_RS04445 (NQZ84_04445) | 893195..893737 | + | 543 | WP_024410480.1 | hypothetical protein | - |
| NQZ84_RS04450 (NQZ84_04450) | 893916..894966 | - | 1051 | Protein_827 | hypothetical protein ; Integrase | Integrase |
| NQZ84_RS04455 (NQZ84_04455) | 895057..895245 | - | 189 | WP_002935229.1 | helix-turn-helix domain-containing protein | - |
| NQZ84_RS04460 (NQZ84_04460) | 895334..896245 | - | 912 | WP_228476728.1 | hypothetical protein ; Integrase | Integrase |
| NQZ84_RS04465 (NQZ84_04465) | 896368..897135 | + | 768 | WP_172042741.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NQZ84_RS04470 (NQZ84_04470) | 897341..897763 | + | 423 | WP_002941127.1 | galactose-6-phosphate isomerase subunit LacA | - |
| NQZ84_RS04475 (NQZ84_04475) | 897790..898305 | + | 516 | WP_018031055.1 | galactose-6-phosphate isomerase subunit LacB | - |
| NQZ84_RS04480 (NQZ84_04480) | 898315..899247 | + | 933 | WP_172027344.1 | tagatose-6-phosphate kinase | - |
| NQZ84_RS04485 (NQZ84_04485) | 899249..900226 | + | 978 | WP_044693662.1 | tagatose-bisphosphate aldolase | - |
| NQZ84_RS04490 (NQZ84_04490) | 900414..901247 | + | 834 | WP_024377390.1 | PRD domain-containing protein | - |
| NQZ84_RS04495 (NQZ84_04495) | 901429..901746 | + | 318 | WP_003048451.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| NQZ84_RS04500 (NQZ84_04500) | 901746..903425 | + | 1680 | WP_044687414.1 | lactose-specific PTS transporter subunit EIIC | - |
| NQZ84_RS04505 (NQZ84_04505) | 903660..905066 | + | 1407 | WP_257047255.1 | 6-phospho-beta-galactosidase | - |
| NQZ84_RS04510 (NQZ84_04510) | 905131..906024 | + | 894 | WP_257047257.1 | aldose 1-epimerase family protein | - |
| NQZ84_RS04515 (NQZ84_04515) | 906359..906979 | + | 621 | WP_024408808.1 | hypothetical protein | - |
| NQZ84_RS04520 (NQZ84_04520) | 907275..907415 | - | 141 | WP_172004056.1 | hypothetical protein | - |
| NQZ84_RS04525 (NQZ84_04525) | 907775..909055 | + | 1281 | WP_024408809.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| NQZ84_RS04530 (NQZ84_04530) | 909131..910663 | - | 1533 | WP_044670350.1 | ATP-binding cassette domain-containing protein | - |
| NQZ84_RS04535 (NQZ84_04535) | 910963..911454 | + | 492 | WP_044670352.1 | GNAT family N-acetyltransferase | - |
| NQZ84_RS04540 (NQZ84_04540) | 911512..912252 | - | 741 | WP_002940438.1 | Arginine transport ATP-binding protein ArtM | VF |
| NQZ84_RS04545 (NQZ84_04545) | 912252..914450 | - | 2199 | WP_044693670.1 | ABC transporter substrate-binding protein/permease | - |
| NQZ84_RS04550 (NQZ84_04550) | 914648..916633 | + | 1986 | WP_257047262.1 | excinuclease ABC subunit UvrB | - |
| NQZ84_RS04555 (NQZ84_04555) | 916820..922885 | + | 6066 | WP_257047263.1 | hypothetical protein | VF |
| NQZ84_RS04560 (NQZ84_04560) | 922963..923466 | + | 504 | WP_257047264.1 | GNAT family N-acetyltransferase | - |
| NQZ84_RS04565 (NQZ84_04565) | 923459..923926 | + | 468 | WP_044776520.1 | 8-oxo-dGTP diphosphatase | - |
| NQZ84_RS04570 (NQZ84_04570) | 924123..924935 | + | 813 | WP_024403335.1 | transporter substrate-binding domain-containing protein | - |
| NQZ84_RS04575 (NQZ84_04575) | 925107..925907 | + | 801 | WP_257047266.1 | transporter substrate-binding domain-containing protein | - |
| NQZ84_RS04580 (NQZ84_04580) | 926035..927873 | - | 1839 | WP_044667674.1 | 1,4-alpha-glucan branching protein GlgB | - |
| NQZ84_RS04585 (NQZ84_04585) | 927946..929391 | - | 1446 | WP_009909891.1 | glycogen synthase GlgA | - |
| NQZ84_RS04590 (NQZ84_04590) | 929400..930515 | - | 1116 | WP_011922501.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| NQZ84_RS04595 (NQZ84_04595) | 930528..931655 | - | 1128 | WP_044667676.1 | glucose-1-phosphate adenylyltransferase | - |
| NQZ84_RS04600 (NQZ84_04600) | 931819..932730 | - | 912 | WP_012775137.1 | hypothetical protein | VF |
| NQZ84_RS04605 (NQZ84_04605) | 932905..933717 | + | 813 | WP_257047400.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| NQZ84_RS04610 (NQZ84_04610) | 933727..934668 | + | 942 | WP_044667678.1 | dihydroorotate dehydrogenase | - |
| NQZ84_RS04615 (NQZ84_04615) | 934833..935528 | + | 696 | WP_257047268.1 | orotidine-5'-phosphate decarboxylase | - |
| NQZ84_RS04620 (NQZ84_04620) | 935521..935877 | + | 357 | WP_257047270.1 | inorganic diphosphatase | - |
| NQZ84_RS04625 (NQZ84_04625) | 935980..936612 | + | 633 | WP_014637891.1 | orotate phosphoribosyltransferase | - |
| NQZ84_RS04630 (NQZ84_04630) | 936721..937647 | + | 927 | WP_013730366.1 | Putative glycosyltransferase CsbB | VF |
| NQZ84_RS04635 (NQZ84_04635) | 937657..938310 | + | 654 | WP_024390027.1 | uracil-DNA glycosylase | - |
| NQZ84_RS04640 (NQZ84_04640) | 938350..939624 | + | 1275 | WP_257047274.1 | dihydroorotase | - |
| NQZ84_RS04645 (NQZ84_04645) | 939748..941862 | + | 2115 | WP_044675042.1 | hypothetical protein | VF |
| NQZ84_RS04650 (NQZ84_04650) | 941914..942561 | + | 648 | WP_044770853.1 | Maf family protein | - |
| NQZ84_RS04655 (NQZ84_04655) | 942613..943101 | + | 489 | WP_002936504.1 | YkgJ family cysteine cluster protein | - |
| NQZ84_RS04660 (NQZ84_04660) | 943201..944052 | + | 852 | WP_029188311.1 | Ribosome biogenesis GTPase A | VF |
| NQZ84_RS04665 (NQZ84_04665) | 944039..944812 | + | 774 | WP_172092160.1 | ribonuclease HII | - |
| NQZ84_RS04670 (NQZ84_04670) | 944815..945825 | + | 1011 | WP_044679661.1 | YdcF family protein | - |
| NQZ84_RS04675 (NQZ84_04675) | 945858..946508 | - | 651 | WP_014735830.1 | hypothetical protein | VF |
| NQZ84_RS04680 (NQZ84_04680) | 946498..947049 | - | 552 | WP_172067724.1 | DUF1836 domain-containing protein | - |
| NQZ84_RS04685 (NQZ84_04685) | 947146..947457 | - | 312 | WP_172058276.1 | rhodanese-like domain-containing protein | - |
| NQZ84_RS04690 (NQZ84_04690) | 947586..948143 | + | 558 | WP_172058277.1 | Maltose O-acetyltransferase | VF |
| NQZ84_RS04695 (NQZ84_04695) | 948202..949044 | + | 843 | WP_044675000.1 | DNA-processing protein DprA | - |
| NQZ84_RS04700 (NQZ84_04700) | 949137..951230 | + | 2094 | WP_004195696.1 | type I DNA topoisomerase | - |
| NQZ84_RS04705 (NQZ84_04705) | 951807..952301 | + | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
| NQZ84_RS04710 (NQZ84_04710) | 952367..952732 | + | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| NQZ84_RS04715 (NQZ84_04715) | 952857..953606 | + | 750 | WP_024405689.1 | HAD family hydrolase | - |
| NQZ84_RS04720 (NQZ84_04720) | 953802..955136 | + | 1335 | WP_257047294.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| NQZ84_RS04725 (NQZ84_04725) | 955156..955584 | + | 429 | WP_044670396.1 | hypothetical protein | - |
| NQZ84_RS04730 (NQZ84_04730) | 955669..956673 | + | 1005 | WP_044753033.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| NQZ84_RS04735 (NQZ84_04735) | 956787..957614 | + | 828 | WP_024394022.1 | alpha/beta hydrolase | - |
| NQZ84_RS04740 (NQZ84_04740) | 957645..958391 | + | 747 | WP_002935029.1 | alpha/beta hydrolase-fold protein | - |
| NQZ84_RS04745 (NQZ84_04745) | 958409..959575 | + | 1167 | WP_044685228.1 | ATP-grasp domain-containing protein | - |
| NQZ84_RS04750 (NQZ84_04750) | 959715..959855 | + | 141 | WP_032536643.1 | hypothetical protein | - |
| NQZ84_RS04755 (NQZ84_04755) | 959868..960257 | + | 390 | WP_024395849.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NQZ84_RS04760 (NQZ84_04760) | 960266..961018 | + | 753 | WP_014637922.1 | ABC transporter ATP-binding protein YxdL | VF |
| NQZ84_RS04765 (NQZ84_04765) | 961019..962989 | + | 1971 | WP_257047305.1 | FtsX-like permease family protein | - |
| NQZ84_RS04770 (NQZ84_04770) | 963080..963331 | + | 252 | WP_014637924.1 | DUF6290 family protein | Antitoxin Detail |
| NQZ84_RS04775 (NQZ84_04775) | 963315..963581 | + | 267 | WP_014637925.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NQZ84_RS04780 (NQZ84_04780) | 963620..964288 | + | 669 | WP_024381849.1 | Response regulator protein GraR | VF |
| NQZ84_RS04785 (NQZ84_04785) | 964285..965226 | + | 942 | WP_014637927.1 | sensor histidine kinase | - |
| NQZ84_RS04790 (NQZ84_04790) | 965303..966811 | + | 1509 | WP_024401231.1 | Phosphomannomutase/phosphoglucomutase | VF |
| NQZ84_RS04795 (NQZ84_04795) | 966874..967944 | - | 1071 | WP_044752114.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| NQZ84_RS04800 (NQZ84_04800) | 968111..968632 | - | 522 | WP_044667745.1 | AAA family ATPase | - |
| NQZ84_RS04805 (NQZ84_04805) | 968698..969438 | - | 741 | WP_044667747.1 | DUF3307 domain-containing protein | - |
| NQZ84_RS04810 (NQZ84_04810) | 969442..970110 | - | 669 | WP_024413643.1 | SatD family protein | - |
| NQZ84_RS04815 (NQZ84_04815) | 970304..971878 | - | 1575 | WP_257047311.1 | signal recognition particle protein | - |
| NQZ84_RS04820 (NQZ84_04820) | 971891..972223 | - | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| NQZ84_RS04825 (NQZ84_04825) | 972326..973024 | - | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| NQZ84_RS04830 (NQZ84_04830) | 973300..974850 | + | 1551 | WP_044755850.1 | glutamine-hydrolyzing GMP synthase | - |
| NQZ84_RS04835 (NQZ84_04835) | 975025..976074 | - | 1050 | WP_257047314.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|