MGE detailed information
MGE type: Prophage MGE length: 45700 bp
Accession: NZ_CP102089 Location: 1837968..1883667 Organism: Staphylococcus capitis subsp. capitis strain H17 Replicon: chromosome
Accession: NZ_CP102089 Location: 1837968..1883667 Organism: Staphylococcus capitis subsp. capitis strain H17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF392_RS08615 | 1833492..1834076 | + | 585 | WP_023350496.1 | hypothetical protein | - |
| NF392_RS08620 | 1834810..1835076 | - | 267 | WP_023350497.1 | hypothetical protein | - |
| NF392_RS08625 | 1835107..1835646 | - | 540 | WP_226859622.1 | hypothetical protein | - |
| NF392_RS08630 | 1835865..1836053 | - | 189 | WP_023350499.1 | hypothetical protein | - |
| NF392_RS08635 | 1836086..1836274 | - | 189 | WP_023350500.1 | hypothetical protein | - |
| NF392_RS08640 | 1836736..1837182 | - | 447 | WP_023350501.1 | hypothetical protein | - |
| NF392_RS08645 | 1837462..1837632 | + | 171 | Protein_1668 | site-specific integrase | - |
| NF392_RS08650 | 1837968..1838165 | - | 198 | WP_023350503.1 | hypothetical protein | - |
| NF392_RS08655 | 1839115..1839300 | - | 186 | WP_023350504.1 | hypothetical protein | - |
| NF392_RS08660 | 1839302..1839412 | - | 111 | WP_049307399.1 | hypothetical protein | - |
| NF392_RS08665 | 1839483..1839634 | - | 152 | Protein_1672 | hypothetical protein | - |
| NF392_RS08670 | 1839781..1841244 | - | 1464 | WP_023350505.1 | SH3 domain-containing protein | - |
| NF392_RS08675 | 1841219..1841629 | - | 411 | WP_023350506.1 | phage holin | - |
| NF392_RS08680 | 1841674..1842207 | - | 534 | WP_023350507.1 | hypothetical protein | - |
| NF392_RS08685 | 1842207..1842722 | - | 516 | WP_023350508.1 | hypothetical protein | - |
| NF392_RS08690 | 1842764..1842910 | - | 147 | WP_023350509.1 | XkdX family protein | - |
| NF392_RS08695 | 1842903..1843247 | - | 345 | WP_023350510.1 | hypothetical protein | - |
| NF392_RS08700 | 1843259..1844917 | - | 1659 | WP_023350511.1 | BppU family phage baseplate upper protein | - |
| NF392_RS08705 | 1844970..1846172 | - | 1203 | WP_080978319.1 | hypothetical protein | VF |
| NF392_RS08710 | 1846821..1847057 | - | 237 | Protein_1681 | CHAP domain-containing protein | - |
| NF392_RS08715 | 1847372..1847503 | - | 132 | WP_023350514.1 | hypothetical protein | - |
| NF392_RS08720 | 1847557..1847955 | - | 399 | WP_037560594.1 | hypothetical protein | - |
| NF392_RS08725 | 1847936..1848358 | - | 423 | WP_260832735.1 | hypothetical protein | - |
| NF392_RS08730 | 1848372..1849559 | - | 1188 | WP_023350517.1 | BppU family phage baseplate upper protein | - |
| NF392_RS08735 | 1849572..1851446 | - | 1875 | WP_124778642.1 | M14 family metallopeptidase | - |
| NF392_RS08740 | 1851449..1852909 | - | 1461 | WP_023350519.1 | phage tail protein | - |
| NF392_RS08745 | 1852921..1853877 | - | 957 | WP_023350520.1 | phage tail family protein | - |
| NF392_RS08750 | 1853889..1857818 | - | 3930 | WP_049399432.1 | tail protein | - |
| NF392_RS08755 | 1857833..1858135 | - | 303 | WP_239662138.1 | hypothetical protein | - |
| NF392_RS08760 | 1858219..1858578 | - | 360 | WP_023350523.1 | tail assembly chaperone | - |
| NF392_RS08765 | 1858641..1859195 | - | 555 | WP_002436441.1 | phage major tail protein, TP901-1 family | - |
| NF392_RS08770 | 1859242..1859631 | - | 390 | WP_023350524.1 | hypothetical protein | - |
| NF392_RS08775 | 1859925..1860611 | - | 687 | WP_023350525.1 | hypothetical protein | - |
| NF392_RS08780 | 1860735..1860983 | - | 249 | Protein_1695 | hypothetical protein | - |
| NF392_RS08785 | 1860983..1861285 | - | 303 | WP_023350527.1 | hypothetical protein | - |
| NF392_RS08790 | 1861282..1861611 | - | 330 | WP_002436519.1 | phage head-tail connector protein | - |
| NF392_RS08795 | 1861613..1861882 | - | 270 | WP_023350528.1 | hypothetical protein | - |
| NF392_RS08800 | 1861905..1862819 | - | 915 | WP_260832742.1 | phage major capsid protein | - |
| NF392_RS08805 | 1862836..1863450 | - | 615 | WP_023350530.1 | DUF4355 domain-containing protein | - |
| NF392_RS08810 | 1863703..1863846 | - | 144 | WP_002436512.1 | hypothetical protein | - |
| NF392_RS08815 | 1863839..1864384 | - | 546 | WP_023350531.1 | hypothetical protein | - |
| NF392_RS08820 | 1864404..1865354 | - | 951 | WP_049399435.1 | minor capsid protein | - |
| NF392_RS08825 | 1865361..1866857 | - | 1497 | WP_023350534.1 | phage portal protein | - |
| NF392_RS08830 | 1866871..1868163 | - | 1293 | WP_023350535.1 | PBSX family phage terminase large subunit | - |
| NF392_RS08835 | 1868156..1868497 | - | 342 | WP_049307394.1 | phBC6A51 family helix-turn-helix protein | - |
| NF392_RS08840 | 1868775..1869191 | - | 417 | WP_002436508.1 | hypothetical protein | - |
| NF392_RS08845 | 1869262..1869432 | - | 171 | WP_002469957.1 | hypothetical protein | - |
| NF392_RS08850 | 1869438..1869578 | - | 141 | WP_002475527.1 | DUF1381 domain-containing protein | - |
| NF392_RS08855 | 1869580..1869756 | - | 177 | WP_023350538.1 | hypothetical protein | - |
| NF392_RS08860 | 1869793..1870218 | - | 426 | WP_049388193.1 | dUTP diphosphatase | - |
| NF392_RS08865 | 1870220..1870417 | - | 198 | WP_023350541.1 | hypothetical protein | - |
| NF392_RS08870 | 1870401..1870955 | - | 555 | WP_023350542.1 | nucleoside 2-deoxyribosyltransferase | - |
| NF392_RS08875 | 1870958..1871155 | - | 198 | WP_023350543.1 | hypothetical protein | - |
| NF392_RS08880 | 1871156..1871503 | - | 348 | WP_023350544.1 | SA1788 family PVL leukocidin-associated protein | - |
| NF392_RS08885 | 1871504..1871695 | - | 192 | WP_023350545.1 | hypothetical protein | - |
| NF392_RS08890 | 1871685..1872095 | - | 411 | WP_023350546.1 | DUF1064 domain-containing protein | - |
| NF392_RS08895 | 1872104..1872349 | - | 246 | WP_002469995.1 | DUF3269 family protein | - |
| NF392_RS08900 | 1872352..1872507 | - | 156 | WP_002469952.1 | hypothetical protein | - |
| NF392_RS08905 | 1872501..1873262 | - | 762 | WP_227707438.1 | IS21 family transposase ISRme9 | Transposase |
| NF392_RS08910 | 1873282..1874037 | - | 756 | WP_037560596.1 | conserved phage C-terminal domain-containing protein | - |
| NF392_RS08915 | 1874024..1874704 | - | 681 | WP_023350548.1 | putative HNHc nuclease | - |
| NF392_RS08920 | 1874718..1875131 | - | 414 | WP_049399325.1 | single-stranded DNA-binding protein | - |
| NF392_RS08925 | 1875124..1875777 | - | 654 | WP_023350550.1 | ERF family protein | - |
| NF392_RS08930 | 1875770..1875991 | - | 222 | WP_023350551.1 | DUF2483 family protein | - |
| NF392_RS08935 | 1875957..1876238 | - | 282 | WP_023350552.1 | hypothetical protein | - |
| NF392_RS08940 | 1876260..1876478 | - | 219 | WP_023350553.1 | hypothetical protein | - |
| NF392_RS08945 | 1876956..1877168 | - | 213 | WP_002436465.1 | DUF771 domain-containing protein | - |
| NF392_RS08950 | 1877172..1877339 | - | 168 | WP_023350555.1 | hypothetical protein | - |
| NF392_RS08955 | 1877441..1877635 | - | 195 | WP_023350556.1 | hypothetical protein | - |
| NF392_RS08960 | 1877718..1877894 | + | 177 | WP_023350557.1 | hypothetical protein | - |
| NF392_RS08965 | 1877920..1878018 | - | 99 | Protein_1732 | hypothetical protein | - |
| NF392_RS08970 | 1878108..1878284 | - | 177 | WP_023350559.1 | hypothetical protein | - |
| NF392_RS08975 | 1878367..1879137 | - | 771 | WP_023350560.1 | ParB N-terminal domain-containing protein | - |
| NF392_RS08980 | 1879134..1880090 | - | 957 | WP_049307539.1 | ParB N-terminal domain-containing protein | - |
| NF392_RS08985 | 1880106..1880345 | - | 240 | WP_049399294.1 | helix-turn-helix transcriptional regulator | - |
| NF392_RS08990 | 1880539..1880868 | + | 330 | WP_002469947.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| NF392_RS08995 | 1880880..1881341 | + | 462 | WP_023350564.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| NF392_RS09000 | 1881360..1881884 | + | 525 | WP_023350565.1 | Ltp family lipoprotein | - |
| NF392_RS09005 | 1881899..1882546 | + | 648 | WP_023350566.1 | hypothetical protein | - |
| NF392_RS09010 | 1882606..1883667 | + | 1062 | WP_023350567.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NF392_RS09025 | 1884179..1884754 | - | 576 | Protein_1742 | competence protein ComK | - |
| NF392_RS09030 | 1884974..1885192 | + | 219 | WP_023350569.1 | IDEAL domain-containing protein | - |
| NF392_RS09035 | 1885273..1886259 | - | 987 | WP_023350570.1 | lipoate--protein ligase | - |
| NF392_RS09040 | 1886464..1886649 | + | 186 | WP_002433441.1 | DUF2187 family protein | - |
| NF392_RS09045 | 1886655..1887257 | + | 603 | WP_002433304.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|