MGE detailed information
MGE type: Prophage MGE length: 45700 bp
Accession: NZ_CP102087 Location: 619903..665602 Organism: Staphylococcus capitis subsp. capitis strain K1-2-2-23 Replicon: chromosome
Accession: NZ_CP102087 Location: 619903..665602 Organism: Staphylococcus capitis subsp. capitis strain K1-2-2-23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF398_RS02995 | 616313..616915 | - | 603 | WP_002433304.1 | CPBP family intramembrane metalloprotease | - |
| NF398_RS03000 | 616921..617106 | - | 186 | WP_002433441.1 | DUF2187 family protein | - |
| NF398_RS03005 | 617311..618297 | + | 987 | WP_023350570.1 | lipoate--protein ligase | - |
| NF398_RS03010 | 618378..618596 | - | 219 | WP_023350569.1 | IDEAL domain-containing protein | - |
| NF398_RS03015 | 618816..619391 | + | 576 | Protein_577 | competence protein ComK | - |
| NF398_RS03030 | 619903..620964 | - | 1062 | WP_023350567.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NF398_RS03035 | 621024..621671 | - | 648 | WP_049399292.1 | hypothetical protein | - |
| NF398_RS03040 | 621686..622210 | - | 525 | WP_023350565.1 | Ltp family lipoprotein | - |
| NF398_RS03045 | 622229..622690 | - | 462 | WP_023350564.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| NF398_RS03050 | 622702..623031 | - | 330 | WP_002469947.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| NF398_RS03055 | 623225..623464 | + | 240 | WP_049399294.1 | helix-turn-helix transcriptional regulator | - |
| NF398_RS03060 | 623480..624436 | + | 957 | WP_049307539.1 | ParB N-terminal domain-containing protein | - |
| NF398_RS03065 | 624433..625203 | + | 771 | WP_023350560.1 | ParB N-terminal domain-containing protein | - |
| NF398_RS03070 | 625286..625462 | + | 177 | WP_023350559.1 | hypothetical protein | - |
| NF398_RS03075 | 625552..625650 | + | 99 | Protein_587 | hypothetical protein | - |
| NF398_RS03080 | 625676..625852 | - | 177 | WP_023350557.1 | hypothetical protein | - |
| NF398_RS03085 | 625935..626129 | + | 195 | WP_023350556.1 | hypothetical protein | - |
| NF398_RS03090 | 626231..626398 | + | 168 | WP_023350555.1 | hypothetical protein | - |
| NF398_RS03095 | 626402..626614 | + | 213 | WP_002436465.1 | DUF771 domain-containing protein | - |
| NF398_RS03100 | 627092..627310 | + | 219 | WP_023350553.1 | hypothetical protein | - |
| NF398_RS03105 | 627332..627613 | + | 282 | WP_023350552.1 | hypothetical protein | - |
| NF398_RS03110 | 627579..627800 | + | 222 | WP_023350551.1 | DUF2483 family protein | - |
| NF398_RS03115 | 627793..628446 | + | 654 | WP_023350550.1 | ERF family protein | - |
| NF398_RS03120 | 628439..628852 | + | 414 | WP_049399325.1 | single-stranded DNA-binding protein | - |
| NF398_RS03125 | 628866..629546 | + | 681 | WP_023350548.1 | putative HNHc nuclease | - |
| NF398_RS03130 | 629533..630288 | + | 756 | WP_037560596.1 | conserved phage C-terminal domain-containing protein | - |
| NF398_RS03135 | 630308..631069 | + | 762 | WP_227707438.1 | IS21 family transposase ISRme9 | Transposase |
| NF398_RS03140 | 631063..631218 | + | 156 | WP_002469952.1 | hypothetical protein | - |
| NF398_RS03145 | 631221..631466 | + | 246 | WP_002469995.1 | DUF3269 family protein | - |
| NF398_RS03150 | 631475..631885 | + | 411 | WP_023350546.1 | DUF1064 domain-containing protein | - |
| NF398_RS03155 | 631875..632066 | + | 192 | WP_023350545.1 | hypothetical protein | - |
| NF398_RS03160 | 632067..632414 | + | 348 | WP_023350544.1 | SA1788 family PVL leukocidin-associated protein | - |
| NF398_RS03165 | 632415..632612 | + | 198 | WP_023350543.1 | hypothetical protein | - |
| NF398_RS03170 | 632615..633169 | + | 555 | WP_023350542.1 | nucleoside 2-deoxyribosyltransferase | - |
| NF398_RS03175 | 633153..633350 | + | 198 | WP_023350541.1 | hypothetical protein | - |
| NF398_RS03180 | 633352..633777 | + | 426 | WP_049388193.1 | dUTP diphosphatase | - |
| NF398_RS03185 | 633814..633990 | + | 177 | WP_023350538.1 | hypothetical protein | - |
| NF398_RS03190 | 633992..634132 | + | 141 | WP_002475527.1 | DUF1381 domain-containing protein | - |
| NF398_RS03195 | 634138..634308 | + | 171 | WP_002469957.1 | hypothetical protein | - |
| NF398_RS03200 | 634379..634795 | + | 417 | WP_002436508.1 | hypothetical protein | - |
| NF398_RS03205 | 635073..635414 | + | 342 | WP_049307394.1 | phBC6A51 family helix-turn-helix protein | - |
| NF398_RS03210 | 635407..636699 | + | 1293 | WP_260833066.1 | PBSX family phage terminase large subunit | - |
| NF398_RS03215 | 636713..638209 | + | 1497 | WP_023350534.1 | phage portal protein | - |
| NF398_RS03220 | 638216..639166 | + | 951 | WP_049399435.1 | minor capsid protein | - |
| NF398_RS03225 | 639186..639515 | + | 330 | WP_228458765.1 | hypothetical protein | - |
| NF398_RS03230 | 639724..639867 | + | 144 | WP_002436512.1 | hypothetical protein | - |
| NF398_RS03235 | 640120..640734 | + | 615 | WP_023350530.1 | DUF4355 domain-containing protein | - |
| NF398_RS03240 | 640751..641665 | + | 915 | WP_023350529.1 | phage major capsid protein | - |
| NF398_RS03245 | 641688..641957 | + | 270 | WP_023350528.1 | hypothetical protein | - |
| NF398_RS03250 | 641959..642288 | + | 330 | WP_002436519.1 | phage head-tail connector protein | - |
| NF398_RS03255 | 642285..642587 | + | 303 | WP_023350527.1 | hypothetical protein | - |
| NF398_RS03260 | 642587..642835 | + | 249 | Protein_624 | hypothetical protein | - |
| NF398_RS03265 | 642959..643645 | + | 687 | WP_023350525.1 | hypothetical protein | - |
| NF398_RS03270 | 643939..644328 | + | 390 | WP_023350524.1 | hypothetical protein | - |
| NF398_RS03275 | 644375..644929 | + | 555 | WP_002436441.1 | phage major tail protein, TP901-1 family | - |
| NF398_RS03280 | 644992..645351 | + | 360 | WP_023350523.1 | tail assembly chaperone | - |
| NF398_RS03285 | 645393..645737 | + | 345 | WP_023350522.1 | hypothetical protein | - |
| NF398_RS03290 | 645752..649681 | + | 3930 | WP_049399432.1 | tail protein | - |
| NF398_RS03295 | 649693..650649 | + | 957 | WP_023350520.1 | phage tail family protein | - |
| NF398_RS03300 | 650661..652121 | + | 1461 | WP_023350519.1 | phage tail protein | - |
| NF398_RS03305 | 652124..653998 | + | 1875 | WP_124778642.1 | M14 family metallopeptidase | - |
| NF398_RS03310 | 654011..655198 | + | 1188 | WP_023350517.1 | BppU family phage baseplate upper protein | - |
| NF398_RS03315 | 655212..655634 | + | 423 | WP_023350516.1 | hypothetical protein | - |
| NF398_RS03320 | 655615..656013 | + | 399 | WP_037560594.1 | hypothetical protein | - |
| NF398_RS03325 | 656067..656198 | + | 132 | WP_023350514.1 | hypothetical protein | - |
| NF398_RS03330 | 656513..656749 | + | 237 | Protein_638 | CHAP domain-containing protein | - |
| NF398_RS03335 | 657374..658600 | + | 1227 | WP_229942352.1 | hypothetical protein | VF |
| NF398_RS03340 | 658653..660311 | + | 1659 | WP_023350511.1 | BppU family phage baseplate upper protein | - |
| NF398_RS03345 | 660323..660667 | + | 345 | WP_023350510.1 | hypothetical protein | - |
| NF398_RS03350 | 660660..660806 | + | 147 | WP_023350509.1 | XkdX family protein | - |
| NF398_RS03355 | 660848..661363 | + | 516 | WP_023350508.1 | hypothetical protein | - |
| NF398_RS03360 | 661363..661896 | + | 534 | WP_023350507.1 | hypothetical protein | - |
| NF398_RS03365 | 661941..662351 | + | 411 | WP_023350506.1 | phage holin | - |
| NF398_RS03370 | 662326..663789 | + | 1464 | WP_023350505.1 | SH3 domain-containing protein | - |
| NF398_RS03375 | 663936..664087 | + | 152 | Protein_647 | hypothetical protein | - |
| NF398_RS03380 | 664158..664268 | + | 111 | WP_049307399.1 | hypothetical protein | - |
| NF398_RS03385 | 664270..664455 | + | 186 | WP_023350504.1 | hypothetical protein | - |
| NF398_RS03390 | 665405..665602 | + | 198 | WP_023350503.1 | hypothetical protein | - |
| NF398_RS03395 | 665938..666108 | - | 171 | Protein_651 | site-specific integrase | - |
| NF398_RS03400 | 666388..666834 | + | 447 | WP_023350501.1 | hypothetical protein | - |
| NF398_RS03405 | 667296..667484 | + | 189 | WP_023350500.1 | hypothetical protein | - |
| NF398_RS03410 | 667517..667705 | + | 189 | WP_023350499.1 | hypothetical protein | - |
| NF398_RS03415 | 667924..668463 | + | 540 | WP_226859622.1 | hypothetical protein | - |
| NF398_RS03420 | 668494..668760 | + | 267 | WP_023350497.1 | hypothetical protein | - |
| NF398_RS03425 | 669494..670078 | - | 585 | WP_023350496.1 | hypothetical protein | - |
| NF398_RS03430 | 670201..670341 | - | 141 | WP_023350495.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|