MGE detailed information
MGE type: Genomic_island MGE length: 48157 bp
Accession: NZ_CP102061 Location: 3996196..4044352 Organism: Escherichia coli strain C31 Replicon: chromosome
Accession: NZ_CP102061 Location: 3996196..4044352 Organism: Escherichia coli strain C31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP943_RS19420 (3992461) | 3992461..3993564 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NP943_RS19425 (3993576) | 3993576..3994829 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NP943_RS19435 (3995034) | 3995034..3995237 | - | 204 | Protein_3791 | integrase | - |
| NP943_RS19440 (3995383) | 3995383..3995853 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| NP943_RS19445 (3995831) | 3995831..3995989 | - | 159 | WP_071550417.1 | ash family protein | - |
| NP943_RS19450 (3996196) | 3996196..3997443 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| NP943_RS19455 (3997433) | 3997433..3999070 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| NP943_RS19460 (3999064) | 3999064..4002162 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| NP943_RS19465 (4002446) | 4002446..4003228 | + | 783 | WP_256946698.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| NP943_RS19470 (4003215) | 4003215..4004135 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NP943_RS19475 (4004300) | 4004300..4005076 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| NP943_RS19480 (4005284) | 4005284..4005619 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| NP943_RS19485 (4005846) | 4005846..4006004 | - | 159 | Protein_3801 | integrase | - |
| NP943_RS19490 (4006053) | 4006053..4006238 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| NP943_RS19495 (4006453) | 4006453..4007067 | + | 615 | WP_001019923.1 | YagU family protein | - |
| NP943_RS19500 (4007138) | 4007138..4007304 | + | 167 | Protein_3804 | tail fiber assembly protein | - |
| NP943_RS19505 (4007316) | 4007316..4007645 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| NP943_RS19510 (4007952) | 4007952..4008662 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| NP943_RS19515 (4008631) | 4008631..4010274 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| NP943_RS19520 (4010264) | 4010264..4012789 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| NP943_RS19525 (4012815) | 4012815..4013483 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| NP943_RS19530 (4013540) | 4013540..4014127 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NP943_RS19535 (4014202) | 4014202..4014744 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| NP943_RS19540 (4015568) | 4015568..4015758 | + | 191 | Protein_3812 | hypothetical protein | - |
| NP943_RS19545 (4015828) | 4015828..4015968 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NP943_RS19550 (4015968) | 4015968..4016231 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NP943_RS19555 (4016596) | 4016596..4016697 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| NP943_RS19560 (4017170) | 4017170..4018312 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| NP943_RS19565 (4018485) | 4018485..4019405 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| NP943_RS19570 (4019562) | 4019562..4020488 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| NP943_RS19575 (4020688) | 4020688..4021581 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| NP943_RS19580 (4021612) | 4021612..4022601 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| NP943_RS19585 (4022628) | 4022628..4023479 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| NP943_RS19590 (4024045) | 4024045..4028292 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| NP943_RS19595 (4028417) | 4028417..4029274 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| NP943_RS19600 (4029522) | 4029522..4030391 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| NP943_RS19605 (4030551) | 4030551..4031144 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| NP943_RS19610 (4031156) | 4031156..4031392 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NP943_RS19615 (4031501) | 4031501..4032826 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NP943_RS19620 (4033053) | 4033053..4033907 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NP943_RS19625 (4034433) | 4034433..4035152 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| NP943_RS19630 (4035163) | 4035163..4036590 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NP943_RS19635 (4036583) | 4036583..4037278 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| NP943_RS19640 (4037521) | 4037521..4038189 | - | 669 | WP_001005267.1 | protein YkgH | - |
| NP943_RS19645 (4038373) | 4038373..4039593 | - | 1221 | WP_152770446.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| NP943_RS19650 (4039588) | 4039588..4040665 | - | 1078 | Protein_3834 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| NP943_RS19655 (4040707) | 4040707..4041468 | - | 762 | WP_001213045.1 | protein HyxA | - |
| NP943_RS19660 (4041622) | 4041622..4042416 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| NP943_RS19665 (4042746) | 4042746..4043309 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| NP943_RS19670 (4044394) | 4044394..4046064 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| NP943_RS19675 (4046078) | 4046078..4047550 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| NP943_RS19680 (4047564) | 4047564..4048151 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|