MGE detailed information
MGE type: Genomic_island MGE length: 25167 bp
Accession: NZ_CP101921 Location: 4291271..4316437 Organism: Escherichia coli strain QA-1986 83 Replicon: chromosome
Accession: NZ_CP101921 Location: 4291271..4316437 Organism: Escherichia coli strain QA-1986 83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP438_RS20755 (4287941) | 4287941..4289398 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| NP438_RS20760 (4289635) | 4289635..4291152 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| NP438_RS20765 (4291271) | 4291271..4291444 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NP438_RS20770 (4291472) | 4291472..4291768 | - | 297 | WP_071988580.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NP438_RS20775 (4291995) | 4291995..4292267 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| NP438_RS20780 (4292480) | 4292480..4296409 | - | 3930 | WP_046201569.1 | Serine protease EspC | VF |
| NP438_RS20785 (4297570) | 4297570..4298400 | - | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| NP438_RS20790 (4299307) | 4299307..4303143 | - | 3837 | WP_001033999.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| NP438_RS20795 (4303493) | 4303493..4304026 | + | 534 | WP_000733565.1 | hypothetical protein | VF |
| NP438_RS20800 (4304095) | 4304095..4306452 | + | 2358 | WP_000695774.1 | Outer membrane usher protein YraJ | VF |
| NP438_RS20805 (4306445) | 4306445..4307146 | + | 702 | WP_000162908.1 | Chaperone protein FaeE | VF |
| NP438_RS20810 (4307166) | 4307166..4308161 | + | 996 | WP_001395679.1 | hypothetical protein | - |
| NP438_RS20815 (4308253) | 4308253..4308696 | + | 444 | WP_000996600.1 | hypothetical protein | VF |
| NP438_RS20820 (4308689) | 4308689..4309207 | + | 519 | WP_000565927.1 | hypothetical protein | - |
| NP438_RS20825 (4309287) | 4309287..4310015 | + | 729 | Protein_4074 | helix-turn-helix domain-containing protein | - |
| NP438_RS20830 (4310145) | 4310145..4312208 | - | 2064 | WP_230986327.1 | peptidase domain-containing ABC transporter | - |
| NP438_RS20835 (4312300) | 4312300..4313520 | - | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| NP438_RS20840 (4313599) | 4313599..4314711 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| NP438_RS20845 (4314908) | 4314908..4315480 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| NP438_RS20850 (4315883) | 4315883..4316634 | + | 752 | Protein_4079 | IS3 family transposase | - |
| NP438_RS20855 (4316763) | 4316763..4318394 | + | 1632 | WP_001216489.1 | sensor histidine kinase | - |
| NP438_RS20860 (4318391) | 4318391..4319110 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| NP438_RS20865 (4319681) | 4319681..4321021 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|