MGE detailed information
MGE type: Prophage MGE length: 49099 bp
Accession: NZ_CP101921 Location: 2530502..2579600 Organism: Escherichia coli strain QA-1986 83 Replicon: chromosome
Accession: NZ_CP101921 Location: 2530502..2579600 Organism: Escherichia coli strain QA-1986 83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP438_RS12155 (2527285) | 2527285..2528418 | + | 1134 | WP_046201463.1 | porin OmpN | - |
| NP438_RS12160 (2528559) | 2528559..2528993 | + | 435 | WP_001082294.1 | universal stress protein UspF | - |
| NP438_RS12165 (2529770) | 2529770..2529883 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NP438_RS12170 (2529952) | 2529952..2530185 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NP438_RS12175 (2530502) | 2530502..2531092 | + | 591 | WP_000078178.1 | recombinase family protein | - |
| NP438_RS12180 (2531190) | 2531190..2531765 | - | 576 | WP_001351719.1 | tail fiber assembly protein | - |
| NP438_RS12185 (2531765) | 2531765..2534836 | - | 3072 | WP_024251431.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NP438_RS12190 (2534901) | 2534901..2535500 | - | 600 | WP_001230290.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| NP438_RS12195 (2535570) | 2535570..2538983 | - | 3414 | WP_073535226.1 | host specificity protein J | - |
| NP438_RS12200 (2539044) | 2539044..2539592 | - | 549 | WP_001396592.1 | tail assembly protein | - |
| NP438_RS12205 (2539589) | 2539589..2540332 | - | 744 | WP_001396591.1 | C40 family peptidase | - |
| NP438_RS12210 (2540338) | 2540338..2541036 | - | 699 | WP_001152432.1 | phage minor tail protein L | - |
| NP438_RS12215 (2541036) | 2541036..2541374 | - | 339 | WP_000024051.1 | phage tail protein | - |
| NP438_RS12220 (2541367) | 2541367..2544600 | - | 3234 | WP_000840622.1 | phage tail tape measure protein | - |
| NP438_RS12225 (2545072) | 2545072..2545431 | - | 360 | WP_122989561.1 | protein YdaY | - |
| NP438_RS12230 (2545582) | 2545582..2546544 | - | 963 | WP_000094292.1 | phage tail tube protein | - |
| NP438_RS12235 (2546571) | 2546571..2546963 | - | 393 | WP_000673076.1 | phage tail terminator-like protein | - |
| NP438_RS12240 (2546960) | 2546960..2547340 | - | 381 | WP_001029815.1 | hypothetical protein | - |
| NP438_RS12245 (2547341) | 2547341..2547724 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| NP438_RS12250 (2547724) | 2547724..2548119 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| NP438_RS12255 (2548123) | 2548123..2548299 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| NP438_RS12260 (2548342) | 2548342..2549481 | - | 1140 | WP_000918482.1 | P22 phage major capsid protein family protein | - |
| NP438_RS12265 (2549580) | 2549580..2550344 | - | 765 | WP_000770044.1 | hypothetical protein | - |
| NP438_RS12270 (2550449) | 2550449..2551561 | - | 1113 | WP_001351715.1 | phage minor head protein | - |
| NP438_RS12275 (2551545) | 2551545..2552951 | - | 1407 | WP_000763703.1 | DUF4055 domain-containing protein | - |
| NP438_RS12280 (2552954) | 2552954..2554255 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| NP438_RS12285 (2554236) | 2554236..2555330 | - | 1095 | WP_000089447.1 | terminase small subunit | - |
| NP438_RS12290 (2555334) | 2555334..2555543 | - | 210 | WP_000126788.1 | hypothetical protein | - |
| NP438_RS12295 (2555521) | 2555521..2556453 | - | 933 | WP_001204037.1 | hypothetical protein | - |
| NP438_RS12300 (2556980) | 2556980..2557237 | - | 258 | Protein_2409 | ParB/Srx family N-terminal domain-containing protein | - |
| NP438_RS12305 (2557375) | 2557375..2558832 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| NP438_RS12310 (2559029) | 2559029..2559214 | - | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| NP438_RS12315 (2559431) | 2559431..2559928 | - | 498 | WP_001135310.1 | lysozyme RrrD | - |
| NP438_RS12320 (2559928) | 2559928..2560143 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| NP438_RS12325 (2560395) | 2560395..2560769 | - | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| NP438_RS12330 (2560941) | 2560941..2561201 | - | 261 | Protein_2415 | cell envelope integrity protein TolA | - |
| NP438_RS12335 (2562414) | 2562414..2562956 | - | 543 | WP_000640161.1 | DUF1133 family protein | - |
| NP438_RS12340 (2562953) | 2562953..2563243 | - | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| NP438_RS12345 (2563243) | 2563243..2563842 | - | 600 | WP_000940319.1 | DUF1367 family protein | - |
| NP438_RS12350 (2564259) | 2564259..2566523 | - | 2265 | WP_000091105.1 | S8 family peptidase | - |
| NP438_RS12355 (2566498) | 2566498..2567652 | - | 1155 | WP_000385105.1 | ATP-binding protein | - |
| NP438_RS12360 (2567846) | 2567846..2568277 | - | 432 | WP_001141107.1 | DUF977 family protein | - |
| NP438_RS12365 (2568293) | 2568293..2569054 | - | 762 | WP_000450658.1 | DUF1627 domain-containing protein | - |
| NP438_RS12370 (2569077) | 2569077..2569823 | - | 747 | WP_000788769.1 | ATP-binding protein | - |
| NP438_RS12375 (2569830) | 2569830..2570618 | - | 789 | WP_001396581.1 | hypothetical protein | - |
| NP438_RS12380 (2570696) | 2570696..2571118 | - | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| NP438_RS12385 (2571115) | 2571115..2571369 | - | 255 | WP_256688188.1 | AlpA family phage regulatory protein | - |
| NP438_RS12390 (2571449) | 2571449..2571868 | + | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| NP438_RS12395 (2572111) | 2572111..2572290 | + | 180 | WP_001326317.1 | hypothetical protein | - |
| NP438_RS12400 (2572301) | 2572301..2572456 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| NP438_RS12405 (2572453) | 2572453..2572941 | - | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| NP438_RS12410 (2573383) | 2573383..2573604 | + | 222 | WP_000560224.1 | killing protein KilR | - |
| NP438_RS12415 (2573604) | 2573604..2573774 | + | 171 | WP_001352098.1 | YdaE family protein | - |
| NP438_RS12420 (2573849) | 2573849..2574124 | + | 276 | WP_024251429.1 | hypothetical protein | - |
| NP438_RS12425 (2574226) | 2574226..2576826 | + | 2601 | WP_000105136.1 | exodeoxyribonuclease VIII | - |
| NP438_RS12430 (2576819) | 2576819..2577628 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| NP438_RS12435 (2577685) | 2577685..2577879 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| - (2577878) | 2577878..2578044 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - (2577878) | 2577878..2578044 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - (2577878) | 2577878..2578044 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - (2577878) | 2577878..2578044 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| NP438_RS12440 (2577872) | 2577872..2578069 | + | 198 | WP_024170988.1 | DUF1187 family protein | - |
| NP438_RS12445 (2578148) | 2578148..2578363 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| NP438_RS12450 (2578365) | 2578365..2579600 | + | 1236 | WP_000040852.1 | site-specific integrase | - |
| NP438_RS12455 (2579652) | 2579652..2580587 | + | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NP438_RS12460 (2580716) | 2580716..2582089 | - | 1374 | WP_000123739.1 | ATP-dependent RNA helicase DbpA | - |
| NP438_RS12465 (2582567) | 2582567..2583550 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NP438_RS12470 (2583564) | 2583564..2583611 | - | 48 | WP_211180494.1 | protein YnaN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|