MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 135460 bp
Accession: NZ_CP101912 Location: 5017357..5152816 Organism: Pseudomonas aeruginosa strain ATCC 27853 Replicon: chromosome
Accession: NZ_CP101912 Location: 5017357..5152816 Organism: Pseudomonas aeruginosa strain ATCC 27853 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP446_RS23665 (NP446_23665) | 5012866..5013138 | + | 273 | WP_016851967.1 | cysteine-rich CWC family protein | - |
| NP446_RS23670 (NP446_23670) | 5013138..5013830 | + | 693 | WP_016851968.1 | 16S rRNA pseudouridine(516) synthase | - |
| NP446_RS23675 (NP446_23675) | 5013966..5015009 | + | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| NP446_RS23680 (NP446_23680) | 5015089..5015826 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| NP446_RS23685 (NP446_23685) | 5016278..5017180 | + | 903 | WP_014603238.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| NP446_RS23695 (NP446_23695) | 5017623..5019476 | + | 1854 | WP_016851969.1 | hypothetical protein ; Integrase | Integrase |
| NP446_RS23700 (NP446_23700) | 5019524..5020150 | - | 627 | WP_016851970.1 | substrate-binding domain-containing protein | - |
| NP446_RS23705 (NP446_23705) | 5020256..5020555 | + | 300 | WP_003282197.1 | helix-turn-helix transcriptional regulator | - |
| NP446_RS23710 (NP446_23710) | 5020582..5022432 | - | 1851 | WP_019416286.1 | MobH family relaxase | - |
| NP446_RS23715 (NP446_23715) | 5022635..5023555 | - | 921 | WP_016851972.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NP446_RS23720 (NP446_23720) | 5023548..5024306 | - | 759 | WP_016851973.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| NP446_RS23725 (NP446_23725) | 5024530..5024904 | + | 375 | WP_016851974.1 | DUF3742 family protein | - |
| NP446_RS23730 (NP446_23730) | 5024921..5026444 | - | 1524 | WP_011829990.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NP446_RS23735 (NP446_23735) | 5026460..5026813 | - | 354 | WP_003292115.1 | hypothetical protein | - |
| NP446_RS23740 (NP446_23740) | 5026810..5028216 | - | 1407 | WP_011829988.1 | integrating conjugative element protein | - |
| NP446_RS23745 (NP446_23745) | 5028227..5029171 | - | 945 | WP_016851975.1 | TIGR03756 family integrating conjugative element protein | - |
| NP446_RS23750 (NP446_23750) | 5029168..5029617 | - | 450 | WP_013982143.1 | TIGR03757 family integrating conjugative element protein | - |
| NP446_RS23755 (NP446_23755) | 5029786..5030280 | - | 495 | WP_011237261.1 | DNA repair protein RadC | - |
| NP446_RS23760 (NP446_23760) | 5030476..5031219 | - | 744 | WP_016851976.1 | DsbA family protein | - |
| NP446_RS23765 (NP446_23765) | 5031233..5034121 | - | 2889 | WP_016851977.1 | conjugative transfer ATPase | - |
| NP446_RS23770 (NP446_23770) | 5034121..5034555 | - | 435 | WP_013721892.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| NP446_RS23775 (NP446_23775) | 5034536..5035969 | - | 1434 | WP_016851978.1 | TIGR03752 family integrating conjugative element protein | - |
| NP446_RS23780 (NP446_23780) | 5035959..5036873 | - | 915 | WP_016851979.1 | TIGR03749 family integrating conjugative element protein | - |
| NP446_RS23785 (NP446_23785) | 5036870..5037562 | - | 693 | WP_016851980.1 | TIGR03746 family integrating conjugative element protein | - |
| NP446_RS23790 (NP446_23790) | 5037559..5037969 | - | 411 | WP_009397206.1 | TIGR03750 family conjugal transfer protein | - |
| NP446_RS23795 (NP446_23795) | 5037982..5038353 | - | 372 | WP_009397207.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| NP446_RS23800 (NP446_23800) | 5038376..5038615 | - | 240 | WP_003140997.1 | TIGR03758 family integrating conjugative element protein | - |
| NP446_RS23805 (NP446_23805) | 5038612..5038977 | - | 366 | WP_016851981.1 | RAQPRD family integrative conjugative element protein | - |
| NP446_RS23810 (NP446_23810) | 5039201..5039401 | + | 201 | WP_003141001.1 | helix-turn-helix domain-containing protein | - |
| NP446_RS23815 (NP446_23815) | 5039461..5042340 | + | 2880 | WP_025986382.1 | SNF2-related protein | - |
| NP446_RS23820 (NP446_23820) | 5042421..5043407 | + | 987 | WP_003141003.1 | ATP-binding protein | - |
| NP446_RS23825 (NP446_23825) | 5043425..5045770 | + | 2346 | WP_225319124.1 | S8 family peptidase | - |
| NP446_RS23830 (NP446_23830) | 5045770..5047560 | + | 1791 | WP_016851984.1 | AIPR family protein | - |
| NP446_RS23835 (NP446_23835) | 5047571..5049268 | + | 1698 | WP_016851985.1 | site-specific DNA-methyltransferase | - |
| NP446_RS23840 (NP446_23840) | 5049268..5052003 | + | 2736 | WP_016851986.1 | DEAD/DEAH box helicase family protein | - |
| NP446_RS23845 (NP446_23845) | 5052118..5054745 | + | 2628 | WP_016851987.1 | AAA family ATPase | - |
| NP446_RS23850 (NP446_23850) | 5054791..5055540 | - | 750 | WP_003141008.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| NP446_RS23855 (NP446_23855) | 5055537..5057693 | - | 2157 | WP_016851988.1 | type IV conjugative transfer system coupling protein TraD | - |
| NP446_RS23860 (NP446_23860) | 5057702..5058235 | - | 534 | WP_003141015.1 | integrating conjugative element protein | - |
| NP446_RS23865 (NP446_23865) | 5058232..5058852 | - | 621 | WP_013982131.1 | hypothetical protein | VF |
| NP446_RS23870 (NP446_23870) | 5058837..5059556 | - | 720 | WP_016851990.1 | TIGR03759 family integrating conjugative element protein | - |
| NP446_RS23875 (NP446_23875) | 5059643..5060290 | - | 648 | WP_016851991.1 | hypothetical protein | - |
| NP446_RS23880 (NP446_23880) | 5060287..5060856 | - | 570 | WP_016851992.1 | hypothetical protein | VF |
| NP446_RS23885 (NP446_23885) | 5061054..5063327 | - | 2274 | WP_016851993.1 | helicase-related protein | - |
| NP446_RS23890 (NP446_23890) | 5063427..5063732 | - | 306 | WP_016851994.1 | hypothetical protein | - |
| NP446_RS23895 (NP446_23895) | 5063834..5064943 | - | 1110 | WP_016851995.1 | DUF6094 domain-containing protein | - |
| NP446_RS23900 (NP446_23900) | 5065009..5065659 | - | 651 | WP_016851996.1 | hypothetical protein | - |
| NP446_RS23905 (NP446_23905) | 5065744..5066109 | - | 366 | WP_013982123.1 | hypothetical protein | - |
| NP446_RS23910 (NP446_23910) | 5066199..5066810 | - | 612 | WP_010792165.1 | DUF3275 family protein | - |
| NP446_RS23915 (NP446_23915) | 5066866..5067417 | - | 552 | WP_010792166.1 | STY4534 family ICE replication protein | - |
| NP446_RS23920 (NP446_23920) | 5067762..5068127 | - | 366 | WP_010792167.1 | DUF3085 domain-containing protein | - |
| NP446_RS23925 (NP446_23925) | 5068193..5068990 | - | 798 | WP_003141039.1 | hypothetical protein | - |
| NP446_RS23930 (NP446_23930) | 5069281..5069997 | - | 717 | WP_016851998.1 | hypothetical protein | - |
| NP446_RS23935 (NP446_23935) | 5070248..5070640 | - | 393 | WP_003141051.1 | hypothetical protein | - |
| NP446_RS23940 (NP446_23940) | 5070666..5070902 | - | 237 | WP_016446173.1 | hypothetical protein | - |
| NP446_RS23945 (NP446_23945) | 5071684..5073699 | - | 2016 | WP_016852000.1 | DNA topoisomerase III | - |
| NP446_RS23950 (NP446_23950) | 5073994..5074377 | - | 384 | WP_016852001.1 | single-stranded DNA-binding protein | - |
| NP446_RS23955 (NP446_23955) | 5074374..5074922 | - | 549 | WP_025986383.1 | DUF3158 family protein | - |
| NP446_RS23960 (NP446_23960) | 5074919..5075707 | - | 789 | WP_016852003.1 | TIGR03761 family integrating conjugative element protein | - |
| NP446_RS23965 (NP446_23965) | 5075896..5076648 | - | 753 | WP_016852004.1 | OST-HTH/LOTUS domain-containing protein | - |
| NP446_RS23970 (NP446_23970) | 5076887..5078080 | - | 1194 | WP_016852005.1 | STY4528 family pathogenicity island replication protein | - |
| NP446_RS23975 (NP446_23975) | 5078084..5078644 | - | 561 | WP_010792177.1 | DUF2857 domain-containing protein | - |
| NP446_RS23980 (NP446_23980) | 5078662..5080305 | - | 1644 | WP_023094219.1 | ParB family protein | - |
| NP446_RS23985 (NP446_23985) | 5080298..5080534 | - | 237 | WP_016852007.1 | hypothetical protein | - |
| NP446_RS23990 (NP446_23990) | 5080518..5081384 | - | 867 | WP_019416284.1 | hypothetical protein | VF |
| NP446_RS23995 (NP446_23995) | 5081425..5081643 | - | 219 | WP_016852009.1 | AlpA family transcriptional regulator | - |
| NP446_RS24000 (NP446_24000) | 5081785..5082543 | - | 759 | WP_003454930.1 | hypothetical protein | - |
| NP446_RS24005 (NP446_24005) | 5083083..5083991 | - | 909 | WP_012761385.1 | Hca operon transcriptional activator HcaR | VF |
| NP446_RS24010 (NP446_24010) | 5084092..5084560 | + | 469 | Protein_4752 | IS66 family transposase | - |
| NP446_RS24015 (NP446_24015) | 5084598..5084975 | - | 378 | WP_016446188.1 | IS110 family transposase IS5708 | Transposase |
| NP446_RS24020 (NP446_24020) | 5085260..5085532 | + | 273 | Protein_4754 | helix-turn-helix domain-containing protein | - |
| NP446_RS24025 (NP446_24025) | 5085577..5086146 | + | 570 | WP_016852012.1 | hypothetical protein | VF |
| NP446_RS24030 (NP446_24030) | 5086241..5089090 | + | 2850 | WP_016852013.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| NP446_RS24035 (NP446_24035) | 5089107..5090537 | + | 1431 | WP_023084997.1 | cardiolipin synthase | - |
| NP446_RS24040 (NP446_24040) | 5090565..5092394 | + | 1830 | WP_016852015.1 | ATP-dependent zinc metalloprotease FtsH 4 | VF |
| NP446_RS24045 (NP446_24045) | 5092473..5092931 | + | 459 | WP_016852016.1 | Spore protein SP21 | VF |
| NP446_RS24050 (NP446_24050) | 5092954..5093868 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| NP446_RS24055 (NP446_24055) | 5093971..5094858 | + | 888 | WP_016852017.1 | heat resistance protein YfdX2 | - |
| NP446_RS24060 (NP446_24060) | 5094955..5095566 | + | 612 | WP_016852018.1 | heat resistance membrane protein HdeD-GI | - |
| NP446_RS24065 (NP446_24065) | 5095646..5096791 | + | 1146 | WP_003141080.1 | hypothetical protein | - |
| NP446_RS24070 (NP446_24070) | 5096781..5097221 | + | 441 | WP_012761376.1 | heat resistance system thioredoxin Trx-GI | - |
| NP446_RS24075 (NP446_24075) | 5097225..5098940 | + | 1716 | WP_003141082.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| NP446_RS24080 (NP446_24080) | 5098937..5099434 | + | 498 | Protein_4766 | heat resistance protein PsiE-GI | - |
| NP446_RS24085 (NP446_24085) | 5099412..5100377 | + | 966 | WP_003141083.1 | zinc metalloprotease HtpX | - |
| NP446_RS24090 (NP446_24090) | 5100402..5101553 | + | 1152 | WP_012761372.1 | hypothetical protein | VF |
| NP446_RS24095 (NP446_24095) | 5101786..5102694 | + | 909 | WP_003141085.1 | LysR family transcriptional regulator | - |
| NP446_RS24100 (NP446_24100) | 5103678..5104403 | + | 726 | WP_016852020.1 | zeta toxin family protein | - |
| NP446_RS24105 (NP446_24105) | 5104412..5104570 | + | 159 | WP_162836249.1 | hypothetical protein | - |
| NP446_RS24110 (NP446_24110) | 5104641..5105696 | - | 1056 | WP_016852021.1 | phage portal protein | - |
| NP446_RS24115 (NP446_24115) | 5105696..5107456 | - | 1761 | WP_025986384.1 | terminase ATPase subunit family protein | - |
| NP446_RS24120 (NP446_24120) | 5107612..5108433 | + | 822 | WP_016852023.1 | GPO family capsid scaffolding protein | - |
| NP446_RS24125 (NP446_24125) | 5108469..5109485 | + | 1017 | WP_016852024.1 | phage major capsid protein, P2 family | - |
| NP446_RS24130 (NP446_24130) | 5109491..5110192 | + | 702 | WP_016852025.1 | terminase endonuclease subunit | - |
| NP446_RS24135 (NP446_24135) | 5110296..5110757 | + | 462 | WP_016852026.1 | head completion/stabilization protein | - |
| NP446_RS24140 (NP446_24140) | 5110757..5110969 | + | 213 | WP_003098378.1 | tail protein X | - |
| NP446_RS24145 (NP446_24145) | 5110994..5111347 | + | 354 | WP_003098379.1 | putative holin | - |
| NP446_RS24150 (NP446_24150) | 5111349..5111621 | + | 273 | WP_016852027.1 | phage holin family protein | - |
| NP446_RS24155 (NP446_24155) | 5111618..5112424 | + | 807 | WP_016852028.1 | N-acetylmuramidase family protein | - |
| NP446_RS24160 (NP446_24160) | 5112421..5112663 | + | 243 | WP_016852029.1 | hypothetical protein | - |
| NP446_RS24165 (NP446_24165) | 5112660..5113022 | + | 363 | Protein_4783 | Rz-like lysis system protein LysB | - |
| NP446_RS24170 (NP446_24170) | 5112946..5113215 | + | 270 | WP_223820175.1 | Rz1-like lysis system protein LysC | - |
| NP446_RS24175 (NP446_24175) | 5113199..5113735 | + | 537 | WP_016852031.1 | phage tail protein | - |
| NP446_RS24180 (NP446_24180) | 5113728..5114186 | + | 459 | WP_016852032.1 | phage virion morphogenesis protein | - |
| NP446_RS24185 (NP446_24185) | 5114256..5114828 | + | 573 | WP_016852033.1 | phage baseplate assembly protein V | - |
| NP446_RS24190 (NP446_24190) | 5114825..5115169 | + | 345 | WP_016852034.1 | GPW/gp25 family protein | - |
| NP446_RS24195 (NP446_24195) | 5115166..5116080 | + | 915 | WP_016852035.1 | baseplate assembly protein | - |
| NP446_RS24200 (NP446_24200) | 5116080..5116616 | + | 537 | WP_016852036.1 | phage tail protein I | - |
| NP446_RS24205 (NP446_24205) | 5116618..5119008 | + | 2391 | WP_016852037.1 | phage tail protein | - |
| NP446_RS24210 (NP446_24210) | 5119060..5119521 | + | 462 | WP_016852038.1 | phage tail assembly chaperone | - |
| NP446_RS24215 (NP446_24215) | 5119612..5120787 | + | 1176 | WP_016852039.1 | phage tail sheath protein | - |
| NP446_RS24220 (NP446_24220) | 5120844..5121359 | + | 516 | WP_016852040.1 | phage major tail tube protein | - |
| NP446_RS24225 (NP446_24225) | 5121414..5121743 | + | 330 | WP_016852041.1 | phage tail assembly protein | - |
| NP446_RS24230 (NP446_24230) | 5121752..5121871 | + | 120 | WP_003098394.1 | GpE family phage tail protein | - |
| NP446_RS24235 (NP446_24235) | 5121861..5124620 | + | 2760 | WP_016852042.1 | phage tail tape measure protein | - |
| NP446_RS24240 (NP446_24240) | 5124626..5125066 | + | 441 | WP_003098399.1 | phage tail protein | - |
| NP446_RS24245 (NP446_24245) | 5125063..5126337 | + | 1275 | WP_016852043.1 | phage late control D family protein | - |
| NP446_RS24250 (NP446_24250) | 5126383..5126952 | - | 570 | WP_031637712.1 | hypothetical protein | - |
| NP446_RS24255 (NP446_24255) | 5126957..5127958 | - | 1002 | WP_153901673.1 | hypothetical protein | - |
| NP446_RS24260 (NP446_24260) | 5128324..5128755 | - | 432 | WP_100209530.1 | helix-turn-helix domain-containing protein | - |
| NP446_RS24265 (NP446_24265) | 5128821..5129051 | + | 231 | WP_033936701.1 | phage-associated protein, BcepMu gp16 family | - |
| NP446_RS24270 (NP446_24270) | 5129081..5129584 | + | 504 | WP_049873872.1 | YmfL family putative regulatory protein | - |
| NP446_RS24275 (NP446_24275) | 5129581..5129859 | + | 279 | WP_016852047.1 | ogr/Delta-like zinc finger family protein | - |
| NP446_RS24280 (NP446_24280) | 5129856..5130215 | + | 360 | WP_016852048.1 | hypothetical protein | - |
| NP446_RS24285 (NP446_24285) | 5130283..5130516 | + | 234 | WP_016852049.1 | hypothetical protein | - |
| NP446_RS24290 (NP446_24290) | 5130535..5133252 | + | 2718 | WP_016852050.1 | toprim domain-containing protein | - |
| NP446_RS24295 (NP446_24295) | 5133306..5133446 | + | 141 | WP_016852051.1 | hypothetical protein | - |
| NP446_RS24300 (NP446_24300) | 5133499..5134230 | + | 732 | WP_016852052.1 | hypothetical protein | - |
| NP446_RS24305 (NP446_24305) | 5134241..5134582 | + | 342 | WP_023127207.1 | hypothetical protein | - |
| NP446_RS24310 (NP446_24310) | 5134652..5135092 | + | 441 | WP_016852054.1 | hypothetical protein | - |
| NP446_RS24315 (NP446_24315) | 5135089..5135265 | + | 177 | WP_016852055.1 | hypothetical protein | - |
| NP446_RS24320 (NP446_24320) | 5135258..5137168 | + | 1911 | WP_016852056.1 | DNA cytosine methyltransferase | - |
| NP446_RS24325 (NP446_24325) | 5137165..5138397 | + | 1233 | WP_016852057.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| NP446_RS24330 (NP446_24330) | 5138408..5138584 | + | 177 | WP_016852058.1 | hypothetical protein | - |
| NP446_RS24335 (NP446_24335) | 5138581..5138949 | + | 369 | WP_016852059.1 | ASCH domain-containing protein | - |
| NP446_RS24340 (NP446_24340) | 5139142..5139345 | + | 204 | WP_003098423.1 | AlpA family phage regulatory protein | - |
| NP446_RS24345 (NP446_24345) | 5139352..5140554 | - | 1203 | WP_016852061.1 | hypothetical protein ; Integrase | Integrase |
| NP446_RS24350 (NP446_24350) | 5140889..5141236 | - | 348 | WP_003123043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NP446_RS24355 (NP446_24355) | 5141246..5141497 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NP446_RS24360 (NP446_24360) | 5141711..5142694 | - | 984 | WP_016852062.1 | IS91 family transposase ISCARN110 | Transposase |
| NP446_RS24365 (NP446_24365) | 5142694..5143986 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| NP446_RS24370 (NP446_24370) | 5144245..5145506 | - | 1262 | Protein_4824 | hypothetical protein | VF |
| NP446_RS24375 (NP446_24375) | 5145508..5145858 | - | 351 | WP_003159569.1 | DUF2523 family protein | - |
| NP446_RS24380 (NP446_24380) | 5145868..5146998 | - | 1131 | WP_240266216.1 | hypothetical protein | - |
| NP446_RS24385 (NP446_24385) | 5147126..5147344 | - | 219 | WP_003163345.1 | hypothetical protein | - |
| NP446_RS24390 (NP446_24390) | 5147358..5147609 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| NP446_RS24395 (NP446_24395) | 5147730..5148164 | - | 435 | WP_003125073.1 | hypothetical protein | - |
| NP446_RS24400 (NP446_24400) | 5148680..5148966 | - | 287 | Protein_4830 | DUF5447 family protein | - |
| NP446_RS24405 (NP446_24405) | 5149336..5149551 | - | 216 | WP_016852068.1 | hypothetical protein | - |
| NP446_RS24410 (NP446_24410) | 5149664..5149936 | + | 273 | WP_071534339.1 | DNA-binding protein | - |
| NP446_RS24415 (NP446_24415) | 5149991..5150683 | + | 693 | WP_023082821.1 | hypothetical protein | - |
| NP446_RS24420 (NP446_24420) | 5151003..5152517 | + | 1515 | WP_023082822.1 | hypothetical protein | - |
| NP446_RS24425 (NP446_24425) | 5152953..5153429 | - | 477 | WP_010895516.1 | hypothetical protein | - |
| NP446_RS24430 (NP446_24430) | 5153661..5153954 | - | 294 | WP_023082823.1 | DUF2845 domain-containing protein | - |
| NP446_RS24435 (NP446_24435) | 5154294..5154551 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| NP446_RS24440 (NP446_24440) | 5154611..5155117 | + | 507 | WP_003123051.1 | N-acetyltransferase | - |
| NP446_RS24445 (NP446_24445) | 5155161..5155556 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| NP446_RS24450 (NP446_24450) | 5155601..5155897 | - | 297 | WP_003120798.1 | putative quinol monooxygenase | - |
| NP446_RS24455 (NP446_24455) | 5156013..5156867 | + | 855 | WP_003123052.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|