MGE detailed information
MGE type: Prophage MGE length: 19239 bp
Accession: NZ_CP101910 Location: 4565584..4584822 Organism: Pseudomonas putida strain ATCC 12633 Replicon: chromosome
Accession: NZ_CP101910 Location: 4565584..4584822 Organism: Pseudomonas putida strain ATCC 12633 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP430_RS20555 (NP430_20555) | 4560927..4561292 | + | 366 | WP_016498457.1 | YbaN family protein | - |
| NP430_RS20560 (NP430_20560) | 4561604..4562962 | + | 1359 | WP_016498456.1 | TolC family outer membrane protein | - |
| NP430_RS20565 (NP430_20565) | 4563132..4563731 | - | 600 | WP_016498455.1 | DTW domain-containing protein | - |
| NP430_RS20570 (NP430_20570) | 4563882..4565447 | - | 1566 | WP_016498454.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| NP430_RS20575 (NP430_20575) | 4565584..4566477 | - | 894 | WP_016498453.1 | LysR family transcriptional regulator | - |
| NP430_RS20580 (NP430_20580) | 4566703..4567653 | + | 951 | WP_016498452.1 | agmatinase | - |
| NP430_RS20585 (NP430_20585) | 4567786..4569165 | + | 1380 | WP_016498451.1 | sodium:solute symporter | - |
| NP430_RS20590 (NP430_20590) | 4569351..4569479 | - | 129 | WP_009683677.1 | PA1414 family protein | - |
| NP430_RS20595 (NP430_20595) | 4569604..4570497 | - | 894 | WP_016498450.1 | HTH-type transcriptional regulator YofA | VF |
| NP430_RS20600 (NP430_20600) | 4570604..4571773 | + | 1170 | WP_016498449.1 | MFS transporter | - |
| NP430_RS20605 (NP430_20605) | 4571903..4572829 | - | 927 | WP_016498448.1 | DMT family transporter | - |
| NP430_RS20610 (NP430_20610) | 4572936..4573331 | - | 396 | WP_016498447.1 | hypothetical protein | - |
| NP430_RS20615 (NP430_20615) | 4573507..4573809 | + | 303 | WP_016488542.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NP430_RS20620 (NP430_20620) | 4573802..4574098 | + | 297 | WP_016498445.1 | putative addiction module antidote protein | Antitoxin Detail |
| NP430_RS20625 (NP430_20625) | 4574185..4574457 | + | 273 | WP_016498444.1 | hypothetical protein | - |
| NP430_RS20630 (NP430_20630) | 4574575..4575936 | - | 1362 | WP_016498443.1 | DEAD/DEAH box helicase | - |
| NP430_RS20635 (NP430_20635) | 4576040..4577341 | + | 1302 | WP_016498442.1 | mechanosensitive ion channel family protein | - |
| NP430_RS20640 (NP430_20640) | 4577458..4578393 | - | 936 | WP_016498441.1 | AEC family transporter | - |
| NP430_RS20645 (NP430_20645) | 4578395..4579270 | - | 876 | WP_016498440.1 | carboxylate/amino acid/amine transporter | - |
| NP430_RS20650 (NP430_20650) | 4579554..4580153 | - | 600 | WP_016498439.1 | FMN-dependent NADH-azoreductase | - |
| NP430_RS20655 (NP430_20655) | 4580263..4580577 | - | 315 | WP_012051530.1 | hypothetical protein | - |
| NP430_RS20660 (NP430_20660) | 4580626..4581549 | + | 924 | WP_016498438.1 | LysR family transcriptional regulator | - |
| NP430_RS20665 (NP430_20665) | 4581563..4582375 | + | 813 | WP_016498437.1 | alpha/beta hydrolase | - |
| NP430_RS20670 (NP430_20670) | 4582369..4582926 | + | 558 | WP_016498436.1 | Peptidyl-prolyl cis-trans isomerase A | VF |
| NP430_RS20675 (NP430_20675) | 4582990..4584822 | + | 1833 | WP_016498435.1 | Putative multidrug export ATP-binding/permease protein | VF |
| NP430_RS20680 (NP430_20680) | 4584948..4586075 | - | 1128 | WP_041167970.1 | GNAT family N-acetyltransferase | - |
| NP430_RS20685 (NP430_20685) | 4586339..4587583 | + | 1245 | WP_016488555.1 | putative porin | - |
| NP430_RS20690 (NP430_20690) | 4587783..4588904 | - | 1122 | WP_016498433.1 | beta-ketoacyl-ACP synthase III | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|