MGE detailed information
MGE type: Prophage MGE length: 25292 bp
Accession: NZ_CP101910 Location: 4195705..4220996 Organism: Pseudomonas putida strain ATCC 12633 Replicon: chromosome
Accession: NZ_CP101910 Location: 4195705..4220996 Organism: Pseudomonas putida strain ATCC 12633 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP430_RS18890 (NP430_18890) | 4192171..4193703 | + | 1533 | WP_016498748.1 | NADH-quinone oxidoreductase subunit M | - |
| NP430_RS18895 (NP430_18895) | 4193711..4195180 | + | 1470 | WP_016498747.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| NP430_RS18900 (NP430_18900) | 4195262..4195525 | - | 264 | WP_016498746.1 | ogr/Delta-like zinc finger family protein | - |
| NP430_RS18905 (NP430_18905) | 4195705..4196097 | + | 393 | WP_016498745.1 | helix-turn-helix domain-containing protein | - |
| NP430_RS18910 (NP430_18910) | 4196094..4196456 | - | 363 | WP_016498744.1 | hypothetical protein | - |
| NP430_RS18915 (NP430_18915) | 4196449..4196796 | - | 348 | WP_016498743.1 | head completion/stabilization protein | - |
| NP430_RS18920 (NP430_18920) | 4196808..4197056 | - | 249 | WP_041167982.1 | Transcriptional activator protein LasR | VF |
| NP430_RS18925 (NP430_18925) | 4197277..4199349 | + | 2073 | WP_016498741.1 | TonB-dependent receptor | - |
| NP430_RS18930 (NP430_18930) | 4199471..4200031 | - | 561 | WP_016498740.1 | class I chromate reductase ChrR | - |
| NP430_RS18935 (NP430_18935) | 4200189..4200407 | + | 219 | WP_016488235.1 | hypothetical protein | - |
| NP430_RS18940 (NP430_18940) | 4200391..4202640 | - | 2250 | WP_016498738.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| NP430_RS18945 (NP430_18945) | 4202816..4203574 | - | 759 | WP_016498737.1 | DNA polymerase III subunit epsilon | - |
| NP430_RS18950 (NP430_18950) | 4203626..4204072 | - | 447 | WP_016498736.1 | ribonuclease HI | - |
| NP430_RS18955 (NP430_18955) | 4204088..4204861 | - | 774 | WP_016498735.1 | hypothetical protein | - |
| NP430_RS18960 (NP430_18960) | 4204947..4205726 | + | 780 | WP_016498734.1 | hydroxyacylglutathione hydrolase | - |
| NP430_RS18965 (NP430_18965) | 4205827..4207257 | + | 1431 | WP_016498733.1 | Membrane-bound lytic murein transglycosylase D | VF |
| NP430_RS18970 (NP430_18970) | 4207523..4209352 | + | 1830 | WP_016498732.1 | extracellular solute-binding protein | - |
| NP430_RS18975 (NP430_18975) | 4209349..4211184 | + | 1836 | WP_016498731.1 | extracellular solute-binding protein | - |
| NP430_RS18980 (NP430_18980) | 4211186..4212259 | + | 1074 | WP_016498730.1 | microcin C ABC transporter permease YejB | - |
| NP430_RS18985 (NP430_18985) | 4212261..4213280 | + | 1020 | WP_016498729.1 | ABC transporter permease | - |
| NP430_RS18990 (NP430_18990) | 4213282..4214892 | + | 1611 | WP_016498728.1 | putative ABC transporter ATP-binding protein YejF | VF |
| NP430_RS18995 (NP430_18995) | 4215131..4215394 | + | 264 | Protein_3722 | DUF3077 domain-containing protein | - |
| NP430_RS19000 (NP430_19000) | 4215577..4216044 | + | 468 | WP_016498727.1 | excisionase family DNA-binding protein | Antitoxin Detail |
| NP430_RS19005 (NP430_19005) | 4216041..4216616 | + | 576 | WP_016498726.1 | PIN domain-containing protein | Toxin Detail |
| NP430_RS19010 (NP430_19010) | 4216839..4219769 | + | 2931 | WP_016498725.1 | aminotransferase | - |
| NP430_RS19015 (NP430_19015) | 4219773..4221008 | - | 1236 | WP_041167657.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| NP430_RS19020 (NP430_19020) | 4221089..4221994 | + | 906 | WP_016498723.1 | LysR family transcriptional regulator | - |
| NP430_RS19025 (NP430_19025) | 4222098..4222793 | - | 696 | WP_016498722.1 | response regulator | - |
| NP430_RS19030 (NP430_19030) | 4222790..4225444 | - | 2655 | WP_016498721.1 | sensor histidine kinase KdpD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|