MGE detailed information
MGE type: Prophage MGE length: 73510 bp
Accession: NZ_CP101866 Location: 3533602..3607111 Organism: Escherichia coli strain LP5-1 Replicon: chromosome
Accession: NZ_CP101866 Location: 3533602..3607111 Organism: Escherichia coli strain LP5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX81_RS17065 (3529284) | 3529284..3530147 | + | 864 | WP_032200809.1 | GTPase family protein | - |
| NPX81_RS17070 (3530239) | 3530239..3531060 | + | 822 | WP_230069315.1 | DUF932 domain-containing protein | - |
| NPX81_RS17075 (3531277) | 3531277..3531978 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| NPX81_RS17080 (3532019) | 3532019..3532255 | + | 237 | WP_001144031.1 | protein YpjK | - |
| NPX81_RS17085 (3532255) | 3532255..3532698 | + | 444 | WP_032199444.1 | lipoprotein YafY | - |
| NPX81_RS17090 (3532721) | 3532721..3533188 | + | 468 | WP_032200803.1 | protein YkfB | - |
| NPX81_RS17095 (3533265) | 3533265..3533504 | + | 240 | WP_180513156.1 | DUF905 domain-containing protein | - |
| NPX81_RS17100 (3533602) | 3533602..3534060 | + | 459 | WP_032177818.1 | antirestriction protein | - |
| NPX81_RS17105 (3534076) | 3534076..3534552 | + | 477 | WP_072667534.1 | RadC family protein | - |
| NPX81_RS17110 (3534561) | 3534561..3534782 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| NPX81_RS17115 (3534801) | 3534801..3535118 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| NPX81_RS17120 (3535139) | 3535139..3535480 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| NPX81_RS17125 (3536024) | 3536024..3536224 | + | 201 | Protein_3351 | integrase | - |
| NPX81_RS17130 (3536291) | 3536291..3537453 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| NPX81_RS17135 (3537483) | 3537483..3538562 | + | 1080 | Protein_3353 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NPX81_RS17140 (3538643) | 3538643..3539353 | - | 711 | WP_230069332.1 | hypothetical protein | - |
| NPX81_RS17145 (3539388) | 3539388..3541223 | - | 1836 | WP_180513198.1 | hypothetical protein | - |
| NPX81_RS17150 (3541238) | 3541238..3541441 | - | 204 | WP_000452041.1 | hypothetical protein | - |
| NPX81_RS17155 (3541528) | 3541528..3542556 | - | 1029 | WP_180513197.1 | major capsid protein | - |
| NPX81_RS17160 (3542575) | 3542575..3542937 | - | 363 | WP_180513196.1 | hypothetical protein | - |
| NPX81_RS17165 (3542934) | 3542934..3543149 | - | 216 | WP_180513195.1 | hypothetical protein | - |
| NPX81_RS17170 (3543499) | 3543499..3543831 | - | 333 | WP_180513194.1 | hypothetical protein | - |
| NPX81_RS17175 (3543833) | 3543833..3544240 | - | 408 | WP_180513193.1 | hypothetical protein | - |
| NPX81_RS17180 (3544373) | 3544373..3544651 | - | 279 | WP_053295824.1 | hypothetical protein | - |
| NPX81_RS17185 (3544663) | 3544663..3545355 | - | 693 | WP_180513191.1 | transcriptional regulator | - |
| NPX81_RS17190 (3545594) | 3545594..3545782 | - | 189 | WP_001513605.1 | hypothetical protein | - |
| NPX81_RS17200 (3549998) | 3549998..3550549 | - | 552 | WP_001323651.1 | hypothetical protein | - |
| NPX81_RS17205 (3551154) | 3551154..3551306 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| NPX81_RS17210 (3552130) | 3552130..3552489 | + | 360 | WP_001243001.1 | hypothetical protein | - |
| NPX81_RS17215 (3552482) | 3552482..3553024 | - | 543 | WP_001678051.1 | plasmid pRiA4b ORF-3 family protein | - |
| NPX81_RS17220 (3553068) | 3553068..3553502 | - | 435 | WP_032283080.1 | hypothetical protein | - |
| NPX81_RS17225 (3553505) | 3553505..3553960 | - | 456 | WP_001371753.1 | DUF4065 domain-containing protein | - |
| NPX81_RS17230 (3554282) | 3554282..3554467 | - | 186 | Protein_3372 | hypothetical protein | - |
| NPX81_RS17235 (3554602) | 3554602..3554883 | - | 282 | WP_001565836.1 | PerC family transcriptional regulator | - |
| NPX81_RS17240 (3555097) | 3555097..3555768 | - | 672 | WP_072859541.1 | peptidase M41 family protein | - |
| NPX81_RS17245 (3555768) | 3555768..3555941 | - | 174 | WP_001565834.1 | hypothetical protein | - |
| NPX81_RS17250 (3556134) | 3556134..3556415 | - | 282 | WP_061093184.1 | hypothetical protein | - |
| NPX81_RS17255 (3556734) | 3556734..3559175 | - | 2442 | WP_097427652.1 | phage/plasmid primase, P4 family | - |
| NPX81_RS17260 (3559168) | 3559168..3559509 | - | 342 | WP_097427651.1 | hypothetical protein | - |
| NPX81_RS17265 (3559519) | 3559519..3560145 | - | 627 | WP_000063605.1 | hypothetical protein | - |
| NPX81_RS17270 (3560142) | 3560142..3560405 | - | 264 | WP_016244015.1 | hypothetical protein | - |
| NPX81_RS17275 (3560402) | 3560402..3560581 | - | 180 | WP_016244014.1 | hypothetical protein | - |
| NPX81_RS17280 (3560574) | 3560574..3561485 | - | 912 | WP_106416725.1 | host cell division inhibitor Icd-like protein | - |
| NPX81_RS17285 (3561472) | 3561472..3561654 | - | 183 | WP_001244025.1 | DUF4222 domain-containing protein | - |
| NPX81_RS17290 (3561647) | 3561647..3562480 | - | 834 | WP_072859543.1 | antA/AntB antirepressor family protein | - |
| NPX81_RS17295 (3562493) | 3562493..3562924 | - | 432 | WP_063112866.1 | hypothetical protein | - |
| NPX81_RS17300 (3562924) | 3562924..3563121 | - | 198 | WP_000083330.1 | AlpA family transcriptional regulator | - |
| NPX81_RS17305 (3563319) | 3563319..3564200 | - | 882 | WP_000251023.1 | DUF6387 family protein | - |
| NPX81_RS17310 (3564343) | 3564343..3565557 | - | 1215 | WP_180513107.1 | Prophage integrase IntS ; Integrase | Integrase |
| NPX81_RS17315 (3566255) | 3566255..3567157 | - | 903 | WP_230069246.1 | hypothetical protein | - |
| NPX81_RS17320 (3567776) | 3567776..3569665 | + | 1890 | WP_230069245.1 | DUF262 domain-containing protein | - |
| NPX81_RS17325 (3569756) | 3569756..3569890 | - | 135 | Protein_3391 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NPX81_RS17330 (3569920) | 3569920..3570423 | + | 504 | WP_230069247.1 | phage tail protein | - |
| NPX81_RS17335 (3570423) | 3570423..3571016 | + | 594 | WP_230069244.1 | tail fiber assembly protein | - |
| NPX81_RS17340 (3570988) | 3570988..3571431 | - | 444 | WP_230069243.1 | tail fiber assembly protein | - |
| NPX81_RS17345 (3571913) | 3571913..3572224 | - | 312 | Protein_3395 | hypothetical protein | - |
| NPX81_RS17350 (3572228) | 3572228..3572812 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| NPX81_RS17355 (3572803) | 3572803..3573861 | - | 1059 | WP_016244979.1 | baseplate J/gp47 family protein | - |
| NPX81_RS17360 (3573848) | 3573848..3574273 | - | 426 | WP_016244980.1 | phage GP46 family protein | - |
| NPX81_RS17365 (3574273) | 3574273..3574821 | - | 549 | WP_001259084.1 | phage baseplate assembly protein V | - |
| NPX81_RS17370 (3574821) | 3574821..3575900 | - | 1080 | WP_000999521.1 | baseplate protein | - |
| NPX81_RS17375 (3575897) | 3575897..3577225 | - | 1329 | WP_001494937.1 | DNA circularization N-terminal domain-containing protein | - |
| NPX81_RS17380 (3577287) | 3577287..3577817 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| NPX81_RS17385 (3577909) | 3577909..3579741 | - | 1833 | WP_001492763.1 | phage tail tape measure protein | - |
| NPX81_RS17390 (3579883) | 3579883..3580152 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| NPX81_RS17395 (3580152) | 3580152..3580508 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| NPX81_RS17400 (3580508) | 3580508..3582004 | - | 1497 | WP_230069242.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NPX81_RS17405 (3581988) | 3581988..3582158 | - | 171 | WP_000497750.1 | DUF2635 domain-containing protein | - |
| NPX81_RS17410 (3582167) | 3582167..3582727 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| NPX81_RS17415 (3582724) | 3582724..3583230 | - | 507 | WP_213722175.1 | hypothetical protein | - |
| NPX81_RS17420 (3583205) | 3583205..3583615 | - | 411 | WP_001676467.1 | phage head closure protein | - |
| NPX81_RS17425 (3583612) | 3583612..3583935 | - | 324 | WP_000927719.1 | head-tail connector protein | - |
| NPX81_RS17430 (3583938) | 3583938..3584138 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| NPX81_RS17435 (3584188) | 3584188..3585393 | - | 1206 | WP_021567480.1 | phage major capsid protein | - |
| NPX81_RS17440 (3585408) | 3585408..3586058 | - | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| NPX81_RS17445 (3586036) | 3586036..3587277 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| NPX81_RS17450 (3587277) | 3587277..3587459 | - | 183 | WP_000605613.1 | protein YmfR | - |
| NPX81_RS17455 (3587471) | 3587471..3589204 | - | 1734 | WP_001676463.1 | terminase large subunit | - |
| NPX81_RS17460 (3589201) | 3589201..3589695 | - | 495 | WP_000929182.1 | phage terminase small subunit P27 family | - |
| NPX81_RS17465 (3589821) | 3589821..3590171 | - | 351 | WP_001135195.1 | HNH endonuclease signature motif containing protein | - |
| NPX81_RS17470 (3590198) | 3590198..3590470 | - | 273 | WP_115905429.1 | peptidase | - |
| NPX81_RS17475 (3590355) | 3590355..3590747 | - | 393 | WP_047089061.1 | DUF2570 domain-containing protein | - |
| NPX81_RS17480 (3590731) | 3590731..3591207 | - | 477 | WP_230069241.1 | glycoside hydrolase family protein | - |
| NPX81_RS17485 (3591211) | 3591211..3591546 | - | 336 | WP_001120502.1 | phage holin, lambda family | - |
| NPX81_RS17490 (3591623) | 3591623..3592675 | - | 1053 | WP_047089059.1 | site-specific DNA-methyltransferase | - |
| NPX81_RS17495 (3592826) | 3592826..3593029 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| NPX81_RS17500 (3593280) | 3593280..3594032 | - | 753 | WP_230069240.1 | antitermination protein | - |
| NPX81_RS17505 (3594046) | 3594046..3595035 | - | 990 | WP_001439745.1 | DUF968 domain-containing protein | - |
| NPX81_RS17510 (3595043) | 3595043..3595852 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| NPX81_RS17515 (3595872) | 3595872..3596261 | - | 390 | WP_230069239.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NPX81_RS17520 (3596258) | 3596258..3596584 | - | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| NPX81_RS17525 (3596581) | 3596581..3597234 | - | 654 | WP_001355692.1 | phage N-6-adenine-methyltransferase | - |
| NPX81_RS17530 (3597234) | 3597234..3597728 | - | 495 | WP_072278360.1 | PerC family transcriptional regulator | - |
| NPX81_RS17535 (3597725) | 3597725..3598666 | - | 942 | WP_000104950.1 | helix-turn-helix domain-containing protein | - |
| NPX81_RS17540 (3598656) | 3598656..3598796 | - | 141 | WP_001359042.1 | DUF4222 domain-containing protein | - |
| NPX81_RS17545 (3599011) | 3599011..3599595 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| NPX81_RS17550 (3599624) | 3599624..3599887 | - | 264 | WP_000098315.1 | YdaS family helix-turn-helix protein | - |
| NPX81_RS17555 (3599994) | 3599994..3600698 | + | 705 | WP_024183918.1 | XRE family transcriptional regulator | - |
| NPX81_RS17560 (3600743) | 3600743..3601105 | + | 363 | WP_047089453.1 | hypothetical protein | - |
| NPX81_RS17565 (3601102) | 3601102..3601734 | + | 633 | WP_052773597.1 | hypothetical protein | - |
| NPX81_RS17570 (3602066) | 3602066..3602272 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| NPX81_RS17575 (3602244) | 3602244..3602678 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| NPX81_RS17580 (3602822) | 3602822..3603132 | + | 311 | Protein_3442 | hypothetical protein | - |
| NPX81_RS17585 (3603147) | 3603147..3603509 | + | 363 | WP_000135682.1 | protein YfdP | - |
| NPX81_RS17590 (3603575) | 3603575..3604399 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| NPX81_RS17595 (3604527) | 3604527..3605063 | + | 537 | Protein_3445 | 5'-deoxynucleotidase | - |
| NPX81_RS17600 (3605054) | 3605054..3605416 | + | 363 | WP_024205910.1 | phage protein | - |
| NPX81_RS17605 (3605416) | 3605416..3605721 | + | 306 | WP_000206732.1 | protein YfdT | - |
| NPX81_RS17610 (3605721) | 3605721..3606071 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| NPX81_RS17615 (3605993) | 3605993..3607111 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| NPX81_RS17625 (3607316) | 3607316..3608569 | - | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NPX81_RS17630 (3608581) | 3608581..3609684 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NPX81_RS17635 (3609972) | 3609972..3611027 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NPX81_RS17640 (3611066) | 3611066..3611467 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|