MGE detailed information
MGE type: Prophage MGE length: 29232 bp
Accession: NZ_CP101858 Location: 458468..487699 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Accession: NZ_CP101858 Location: 458468..487699 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS02280 (454457) | 454457..454504 | + | 48 | WP_211180494.1 | protein YnaN | - |
| NPX80_RS02285 (454518) | 454518..455501 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NPX80_RS02290 (455979) | 455979..457352 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| NPX80_RS02295 (457481) | 457481..458416 | - | 936 | WP_242808441.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NPX80_RS02300 (458468) | 458468..459703 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NPX80_RS02305 (459705) | 459705..459920 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (460024) | 460024..460202 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (460024) | 460024..460202 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (460024) | 460024..460202 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (460024) | 460024..460202 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| NPX80_RS02310 (459999) | 459999..460208 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| NPX80_RS02315 (460201) | 460201..460395 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| NPX80_RS02320 (460452) | 460452..461261 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| NPX80_RS02325 (461254) | 461254..463854 | - | 2601 | WP_001532611.1 | exodeoxyribonuclease VIII | - |
| NPX80_RS02330 (463956) | 463956..464231 | - | 276 | WP_000632297.1 | protein RacC | - |
| NPX80_RS02335 (464306) | 464306..464476 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| NPX80_RS02340 (464476) | 464476..464697 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| NPX80_RS02345 (465139) | 465139..465627 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| NPX80_RS02350 (465624) | 465624..465779 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| NPX80_RS02355 (465790) | 465790..465924 | - | 135 | WP_000233809.1 | phage protein | - |
| NPX80_RS02360 (466211) | 466211..466630 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| NPX80_RS02365 (466710) | 466710..466964 | + | 255 | WP_001072337.1 | hypothetical protein | - |
| NPX80_RS02370 (466961) | 466961..467386 | + | 426 | WP_000693853.1 | toxin YdaT family protein | - |
| NPX80_RS02375 (467458) | 467458..468528 | + | 1071 | WP_001262393.1 | hypothetical protein | - |
| NPX80_RS02380 (468569) | 468569..468991 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| NPX80_RS02385 (469332) | 469332..471329 | + | 1998 | WP_001676522.1 | choline BCCT transporter BetT | - |
| NPX80_RS02390 (471393) | 471393..472670 | + | 1278 | WP_001532597.1 | DUF2254 domain-containing protein | - |
| NPX80_RS02395 (472801) | 472801..473682 | - | 882 | WP_000019009.1 | LysR family transcriptional regulator | - |
| NPX80_RS02400 (473679) | 473679..474371 | - | 693 | WP_000957774.1 | gamma-glutamylcyclotransferase | - |
| NPX80_RS02405 (474383) | 474383..475582 | - | 1200 | WP_001117227.1 | MFS transporter | - |
| NPX80_RS02410 (476306) | 476306..476644 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| NPX80_RS02415 (477458) | 477458..478057 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| NPX80_RS02420 (478057) | 478057..478347 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| NPX80_RS02425 (478344) | 478344..478886 | + | 543 | WP_000640162.1 | DUF1133 family protein | - |
| NPX80_RS02430 (480098) | 480098..480358 | + | 261 | Protein_480 | cell envelope integrity protein TolA | - |
| NPX80_RS02435 (480530) | 480530..480904 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| NPX80_RS02440 (481156) | 481156..481371 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| NPX80_RS02445 (481371) | 481371..481868 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| NPX80_RS02450 (482085) | 482085..482270 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| NPX80_RS02455 (482467) | 482467..483924 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| NPX80_RS02460 (484062) | 484062..484244 | + | 183 | Protein_486 | ParB/Srx family N-terminal domain-containing protein | - |
| NPX80_RS02465 (484243) | 484243..484623 | + | 381 | Protein_487 | hypothetical protein | - |
| NPX80_RS02470 (484643) | 484643..486436 | + | 1794 | Protein_488 | tail fiber protein | - |
| NPX80_RS02475 (486436) | 486436..487011 | + | 576 | WP_000885599.1 | tail fiber assembly protein | - |
| NPX80_RS02480 (487109) | 487109..487699 | - | 591 | WP_000086519.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NPX80_RS02485 (488016) | 488016..488249 | - | 234 | WP_000836772.1 | cold shock protein YdfK | - |
| NPX80_RS02490 (488318) | 488318..488431 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NPX80_RS02495 (489219) | 489219..489653 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| NPX80_RS02500 (489794) | 489794..490927 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|