MGE detailed information
MGE type: Genomic_island MGE length: 11548 bp
Accession: NZ_CP101858 Location: 4157381..4168928 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Accession: NZ_CP101858 Location: 4157381..4168928 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS20100 (4153498) | 4153498..4157149 | + | 3652 | Protein_3920 | DUF6531 domain-containing protein | - |
| NPX80_RS20105 (4157351) | 4157351..4157614 | + | 264 | WP_001513053.1 | hypothetical protein | - |
| NPX80_RS20110 (4157529) | 4157529..4157714 | - | 186 | WP_122985282.1 | hypothetical protein | - |
| NPX80_RS20115 (4157795) | 4157795..4158921 | + | 1127 | Protein_3923 | ISAs1 family transposase ISEc26 | Transposase |
| NPX80_RS20120 (4159024) | 4159024..4160160 | + | 1137 | Protein_3924 | ISAs1 family transposase | - |
| NPX80_RS20125 (4160202) | 4160202..4160972 | - | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| NPX80_RS20130 (4161153) | 4161153..4161599 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NPX80_RS20135 (4161642) | 4161642..4164086 | - | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| NPX80_RS20140 (4164326) | 4164326..4164904 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NPX80_RS20145 (4165110) | 4165110..4165877 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NPX80_RS20150 (4165848) | 4165848..4166588 | - | 741 | WP_063100007.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NPX80_RS20155 (4166744) | 4166744..4167022 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NPX80_RS20160 (4167025) | 4167025..4167285 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NPX80_RS20165 (4167471) | 4167471..4168244 | + | 774 | WP_000543895.1 | hypothetical protein | VF |
| NPX80_RS20170 (4168301) | 4168301..4168657 | - | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NPX80_RS20175 (4168650) | 4168650..4168928 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| NPX80_RS20180 (4169033) | 4169033..4170745 | - | 1713 | Protein_3936 | flagellar biosynthesis protein FlhA | - |
| NPX80_RS20185 (4170717) | 4170717..4171502 | + | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| NPX80_RS20190 (4171573) | 4171573..4172628 | + | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| NPX80_RS20195 (4172625) | 4172625..4173077 | + | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|